Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08964 Vaccinium macrocarpon HOM05D005218 ORTHO05D006657 0.0e+00 1413.7 702 100.0
Rhsim04G0119400 Rhododendron simsii HOM05D005218 ORTHO05D006657 1.1e-173 614.4 740 50.8
CSS0045446 Camellia sinensis var. sinensis HOM05D005218 ORTHO05D006657 3.9e-163 579.3 702 48.3
Hma1.2p1_1020F.1_g248500 Hydrangea macrophylla HOM05D005218 ORTHO05D006657 7.6e-159 565.1 701 47.5
Dinv16915 Davidia involucrata HOM05D005218 ORTHO05D006657 2.5e-157 560.1 701 47.5
Cc06_g00030 Coffea canephora HOM05D005218 ORTHO05D006657 1.1e-149 534.6 695 46.6
Peaxi162Scf00374g00623 Petunia axillaris HOM05D005218 ORTHO05D006657 1.9e-149 533.9 700 45.4
Lj2A53G27 Lonicera japonica HOM05D005218 ORTHO05D006657 7.2e-149 531.9 704 45.9
GSVIVG01029830001 Vitis vinifera HOM05D005218 ORTHO05D006657 7.9e-148 528.5 700 45.1
Solyc10g074690.2 Solanum lycopersicum HOM05D005218 ORTHO05D006657 5.1e-147 525.8 696 45.5
Sopen10g027170 Solanum pennellii HOM05D005218 ORTHO05D006657 9.7e-146 521.5 696 45.3
CAN.G455.1 Capsicum annuum HOM05D005218 ORTHO05D006657 1.3e-145 521.2 702 44.9
SGA_v2.0_scaffold85G26585 Striga asiatica HOM05D005218 ORTHO05D006657 2.2e-145 520.4 712 45.1
TAR369G0292 Trochodendron aralioides HOM05D005218 ORTHO05D006657 4.1e-144 516.2 701 44.9
MSTRG.5474 Avicennia marina HOM05D005218 ORTHO05D006657 5.9e-143 512.3 689 44.4
Cfa016978 Carpinus fangiana HOM05D005218 ORTHO05D006657 1.7e-142 510.8 700 43.9
QL07p030229 Quercus lobata HOM05D005218 ORTHO05D006657 1.4e-141 507.7 698 43.4
ECA236G4239 Erigeron canadensis HOM05D005218 ORTHO05D006657 7.2e-141 505.4 701 44.4
CANSAT21G2189 Cannabis sativa HOM05D005218 ORTHO05D006657 2.7e-140 503.4 702 42.9
Lsat_1_v5_gn_8_108900 Lactuca sativa HOM05D005218 ORTHO05D006657 6.1e-140 502.3 703 44.8
Nn5g26729 Nelumbo nucifera HOM05D005218 ORTHO05D006657 6.1e-140 502.3 692 43.1
Thecc.04G061600 Theobroma cacao HOM05D005218 ORTHO05D006657 8.8e-139 498.4 700 43.9
Migut.J00001 Erythranthe guttata HOM05D005218 ORTHO05D006657 1.1e-138 498.0 695 43.3
Prupe.6G300700 Prunus persica HOM05D005218 ORTHO05D006657 1.1e-138 498.0 704 43.5
Manes.08G165900 Manihot esculenta HOM05D005218 ORTHO05D006657 7.4e-138 495.4 698 42.8
Duzib268G1588 Durio zibethinus HOM05D005218 ORTHO05D006657 9.7e-138 495.0 700 43.7
MD04G1181300 Malus domestica HOM05D005218 ORTHO05D006657 9.7e-138 495.0 703 43.4
Ciclev10011748m.g Citrus clementina HOM05D005218 ORTHO05D006657 1.3e-137 494.6 700 42.0
TWI74G0252 Tripterygium wilfordii HOM05D005218 ORTHO05D006657 2.8e-137 493.4 700 42.3
Manes.09G119600 Manihot esculenta HOM05D005218 ORTHO05D006657 8.2e-137 491.9 702 42.5
Eucgr.K01318 Eucalyptus grandis HOM05D005218 ORTHO05D006657 1.1e-136 491.5 700 42.7
PGR004G2278 Punica granatum HOM05D005218 ORTHO05D006657 1.8e-136 490.7 700 42.4
COL.COLO4_20050 Corchorus olitorius HOM05D005218 ORTHO05D006657 3.1e-136 490.0 701 42.9
Atru.chr8.19_Atru.chr8.20 Acer truncatum HOM05D005218 ORTHO05D006657 7.0e-136 488.8 700 42.6
arahy.Tifrunner.gnm1.ann1.6F524X Arachis hypogaea HOM05D005218 ORTHO05D006657 1.2e-135 488.0 695 41.6
Gohir.A02G000400 Gossypium hirsutum HOM05D005218 ORTHO05D006657 2.6e-135 486.9 701 42.9
Gorai.005G001100 Gossypium raimondii HOM05D005218 ORTHO05D006657 5.9e-135 485.7 702 43.0
TWI77G0041 Tripterygium wilfordii HOM05D005218 ORTHO05D006657 7.7e-135 485.3 700 42.1
MD12G1196200 Malus domestica HOM05D005218 ORTHO05D006657 1.0e-134 485.0 703 43.0
Gohir.D02G000700 Gossypium hirsutum HOM05D005218 ORTHO05D006657 1.3e-134 484.6 702 43.0
Glyma.16G222300 Glycine max HOM05D005218 ORTHO05D006657 3.8e-134 483.0 695 41.6
Hund19374 Selenicereus undatus HOM05D005218 ORTHO05D006657 3.8e-134 483.0 692 42.5
Ah.04g166670 Amaranthus hybridus HOM05D005218 ORTHO05D006657 1.9e-133 480.7 692 42.1
Actinidia20812 Actinidia chinensis HOM05D005218 ORTHO05D006657 3.2e-133 479.9 637 45.8
Ca_23103_v3 Cicer arietinum L. HOM05D005218 ORTHO05D006657 4.2e-133 479.6 693 41.8
arahy.Tifrunner.gnm1.ann1.M7CUXC Arachis hypogaea HOM05D005218 ORTHO05D006657 5.5e-133 479.2 695 41.2
Phvul.010G060400 Phaseolus vulgaris HOM05D005218 ORTHO05D006657 9.4e-133 478.4 701 40.7
VMungo0331G1207 Vigna mungo HOM05D005218 ORTHO05D006657 1.2e-132 478.0 697 41.2
Aqoxy2G00608 Aquilegia oxysepala HOM05D005218 ORTHO05D006657 4.7e-132 476.1 695 41.9
ECA248G3767 Erigeron canadensis HOM05D005218 ORTHO05D006657 6.1e-132 475.7 694 41.6
HanXRQChr14g0445831 Helianthus annuus HOM05D005218 ORTHO05D006657 1.0e-131 474.9 705 42.1
Glyma.03G000700 Glycine max HOM05D005218 ORTHO05D006657 2.3e-131 473.8 699 40.9
RcHm_v2.0_Chr3g0459311 Rosa chinensis HOM05D005218 ORTHO05D006657 2.3e-131 473.8 703 42.0
Potri.016G143700 Populus trichocarpa HOM05D005218 ORTHO05D006657 8.8e-131 471.9 703 42.2
HanXRQChr11g0329321 Helianthus annuus HOM05D005218 ORTHO05D006657 2.0e-130 470.7 693 40.8
FAN02G3856 Fragaria x ananassa HOM05D005218 ORTHO05D006657 7.0e-128 462.2 703 41.4
MBI15_g33472_MAGBIO Magnolia biondii HOM05D005218 ORTHO05D006657 1.7e-126 457.6 690 41.0
BraA03t09386Z Brassica rapa HOM05D005218 ORTHO05D006657 2.9e-126 456.8 694 41.1
Hma1.2p1_1020F.1_g248520 Hydrangea macrophylla HOM05D005218 ORTHO05D006657 2.9e-126 456.8 520 51.0
BraA02t04669Z Brassica rapa HOM05D005218 ORTHO05D006657 3.8e-126 456.4 701 40.7
MELO3C025278.2 Cucumis melo HOM05D005218 ORTHO05D006657 3.8e-126 456.4 698 40.8
Lalb_Chr13g0290271 Lupinus albus HOM05D005218 ORTHO05D006657 6.5e-126 455.7 698 41.3
Sed0017962 Sechium edule HOM05D005218 ORTHO05D006657 8.5e-126 455.3 698 40.5
AL6G10010 Arabidopsis lyrata HOM05D005218 ORTHO05D006657 1.9e-125 454.1 692 40.8
CARHR212360 Cardamine hirsuta HOM05D005218 ORTHO05D006657 2.5e-125 453.8 694 40.6
CsaV3_4G013540 Cucumis sativus L. HOM05D005218 ORTHO05D006657 5.5e-125 452.6 698 40.4
unitig_699.g19018 Utricularia gibba HOM05D005218 ORTHO05D006657 5.5e-125 452.6 691 40.2
Thhalv10013603m.g Eutrema salsugineum HOM05D005218 ORTHO05D006657 7.2e-125 452.2 694 40.5
AT5G01010 Arabidopsis thaliana HOM05D005218 ORTHO05D006657 9.4e-125 451.8 692 40.9
Nitab4.5_0002139g0070 Nicotiana tabacum HOM05D005218 ORTHO05D006657 9.4e-125 451.8 702 41.7
Sp6g41230 Schrenkiella parvula HOM05D005218 ORTHO05D006657 1.0e-123 448.4 694 40.3
DCAR_023955 Daucus carota HOM05D005218 ORTHO05D006657 1.4e-123 448.0 720 39.6
BcaB01g06261 Brassica carinata HOM05D005218 ORTHO05D006657 3.0e-123 446.8 694 40.6
Nitab4.5_0003037g0020 Nicotiana tabacum HOM05D005218 ORTHO05D006657 6.8e-123 445.7 702 41.6
BolC2t05996H Brassica oleracea HOM05D005218 ORTHO05D006657 7.5e-122 442.2 707 39.6
Carub.0024s0001 Capsella rubella HOM05D005218 ORTHO05D006657 9.8e-122 441.8 692 40.0
Medtr8g005040 Medicago truncatula HOM05D005218 ORTHO05D006657 1.3e-121 441.4 694 40.1
Sabra04G0159600 Salix brachista HOM05D005218 ORTHO05D006657 2.8e-121 440.3 704 40.9
THA.LOC104816146 Tarenaya hassleriana HOM05D005218 ORTHO05D006657 2.8e-121 440.3 698 40.1
PSO384G1586 Papaver somniferum HOM05D005218 ORTHO05D006657 3.7e-121 439.9 693 39.4
BcaC03g13099 Brassica carinata HOM05D005218 ORTHO05D006657 1.1e-120 438.3 691 39.9
Aa31LG5G11280 Aethionema arabicum HOM05D005218 ORTHO05D006657 2.0e-119 434.1 678 40.1
Sabra06G0088900 Salix brachista HOM05D005218 ORTHO05D006657 3.8e-118 429.9 696 39.9
CDE06G0216 Ceratophyllum demersum HOM05D005218 ORTHO05D006657 8.6e-118 428.7 691 38.5
BNapus_Darmor_BZH_scaffold_209p00020 Brassica napus HOM05D005218 ORTHO05D006657 1.2e-116 424.9 678 39.4
Zm00001eb284640 Zea mays HOM05D005218 ORTHO05D006657 2.8e-113 413.7 699 37.5
PSO339G0748 Papaver somniferum HOM05D005218 ORTHO05D006657 6.3e-113 412.5 707 38.2
EL10Ac4g10395 Beta vulgaris HOM05D005218 ORTHO05D006657 2.4e-112 410.6 683 39.2
Os05g0306000 Oryza sativa ssp. japonica HOM05D005218 ORTHO05D006657 1.9e-109 401.0 699 37.6
Sc02g0000100 Simmondsia chinensis HOM05D005218 ORTHO05D006657 3.6e-108 396.7 520 44.6
ClCG04G005100 Citrullus lanatus HOM05D005218 ORTHO05D006657 8.9e-107 392.1 698 37.5
FAN05G1148 Fragaria x ananassa HOM05D005218 ORTHO05D006657 1.9e-104 384.4 703 37.7
Sabra04G0159700 Salix brachista HOM05D005218 ORTHO05D006657 1.7e-102 377.9 692 37.6
QL07p030634 Quercus lobata HOM05D005218 ORTHO05D006657 2.1e-100 370.9 498 44.0
Haze_21230 Corylus avellana HOM05D005218 ORTHO05D006657 8.0e-100 369.0 718 35.9
FAN09G2324 Fragaria x ananassa HOM05D005218 ORTHO05D006657 1.4e-99 368.2 518 43.4
FvH4_6g09090 Fragaria vesca HOM05D005218 ORTHO05D006657 8.9e-99 365.5 518 43.2
FAN14G0475 Fragaria x ananassa HOM05D005218 ORTHO05D006657 2.0e-98 364.4 518 43.1
TPR.G30733 Trifolium pratense HOM05D005218 ORTHO05D006657 2.6e-98 364.0 925 30.6
Lsat_1_v5_gn_5_153501 Lactuca sativa HOM05D005218 ORTHO05D006657 7.5e-98 362.5 553 40.5
Oeu027654.1 Olea europaea HOM05D005218 ORTHO05D006657 6.4e-97 359.4 493 44.4
Lj3g0026233 Lotus japonicus HOM05D005218 ORTHO05D006657 1.4e-96 358.2 519 40.8
Psat2g191240 Pisum sativum HOM05D005218 ORTHO05D006657 1.2e-95 355.1 516 41.7
AagrBONN_evm.TU.Sc2ySwM_228.4747 Anthoceros agrestis HOM05D005218 ORTHO05D006657 7.3e-93 345.9 695 33.5
BcaB01g06128 Brassica carinata HOM05D005218 ORTHO05D006657 1.7e-89 334.7 345 53.0
BolC3t12584H Brassica oleracea HOM05D005218 ORTHO05D006657 7.1e-88 329.3 521 40.5
SMO198G0089 Selaginella moellendorffii HOM05D005218 ORTHO05D006657 6.2e-84 316.2 692 30.9
Mapoly0045s0012 Marchantia polymorpha HOM05D005218 ORTHO05D006657 6.8e-83 312.8 705 30.4
Cpa.g.sc1919.1 Carica papaya HOM05D005218 ORTHO05D006657 3.5e-79 300.4 178 84.3
CBR_g279 Chara braunii HOM05D005218 ORTHO05D006657 2.0e-74 284.6 697 30.4
Pp3c6_1360 Physcomitrium patens HOM05D005218 ORTHO05D006657 2.6e-74 284.3 354 44.6
CiPaw.09G224300 Carya illinoinensis HOM05D005218 ORTHO05D006657 2.8e-68 264.2 161 80.1
MBI03_g45858_MAGBIO Magnolia biondii HOM05D005218 ORTHO05D006657 2.3e-62 244.6 446 37.2
AUR62006464 Chenopodium quinoa HOM05D005218 ORTHO05D006657 8.7e-62 242.7 417 38.1
RcHm_v2.0_Chr2g0142661 Rosa chinensis HOM05D005218 ORTHO05D006657 1.3e-57 228.8 195 62.1
RcHm_v2.0_Chr4g0423451 Rosa chinensis HOM05D005218 ORTHO05D006657 1.2e-55 222.2 187 65.2
SEGI_33787 Sequoiadendron giganteum HOM05D005218 ORTHO05D006657 7.9e-55 219.5 159 66.7
Actinidia32581 Actinidia chinensis HOM05D005218 ORTHO05D006657 1.8e-54 218.4 140 75.7
RcHm_v2.0_Chr3g0481991 Rosa chinensis HOM05D005218 ORTHO05D006657 3.5e-47 194.1 172 61.0
CiPaw.09G224400 Carya illinoinensis HOM05D005218 ORTHO05D006657 1.3e-46 192.2 141 66.0
CDE07G0921 Ceratophyllum demersum HOM05D005218 ORTHO05D006657 8.7e-46 189.5 108 85.2
PRCOL_00004779 Prasinoderma coloniale HOM05D005218 ORTHO05D006657 4.8e-44 183.7 350 30.9
Actinidia35793 Actinidia chinensis HOM05D005218 ORTHO05D006657 9.1e-35 152.9 203 43.3
CDE07G0273 Ceratophyllum demersum HOM05D005218 ORTHO05D006657 2.0e-34 151.8 140 51.4
Cre02.g117950 Chlamydomonas reinhardtii HOM05D005218 ORTHO05D006657 1.9e-32 145.2 182 44.0
CDE07G0892 Ceratophyllum demersum HOM05D005218 ORTHO05D006657 1.2e-26 125.9 120 54.2
AUR62029820 Chenopodium quinoa HOM05D005218 ORTHO05D006657 2.6e-26 124.8 340 29.4
RcHm_v2.0_Chr3g0494831 Rosa chinensis HOM05D005218 ORTHO05D006657 8.5e-25 119.8 97 56.7
Sabra12G0043200 Salix brachista HOM05D005218 ORTHO05D006657 3.2e-24 117.9 163 46.0
Lsat_1_v5_gn_8_105921 Lactuca sativa HOM05D005218 ORTHO05D002018 3.0e-22 111.3 84 60.7
A07p02820 Brassica napus HOM05D005218 ORTHO05D006657 4.1e-19 100.9 60 81.7
Carub.0005s0002 Capsella rubella HOM05D005218 ORTHO05D006657 4.1e-19 100.9 52 80.8
BraA07t28080Z Brassica rapa HOM05D005218 ORTHO05D006657 5.3e-19 100.5 53 90.6
Lsat_1_v5_gn_2_39840 Lactuca sativa HOM05D000613 ORTHO05D000446 3.5e-18 97.8 71 64.8
Lsat_1_v5_gn_8_9201 Lactuca sativa HOM05D005218 ORTHO05D000446 2.9e-17 94.7 72 62.5
SEGI_25208 Sequoiadendron giganteum HOM05D005218 ORTHO05D006657 5.0e-17 94.0 89 48.3
Lsat_1_v5_gn_4_157281 Lactuca sativa HOM05D005218 ORTHO05D000446 3.2e-16 91.3 71 62.0
Lsat_1_v5_gn_5_172481 Lactuca sativa HOM05D001702 ORTHO05D001791 3.7e-12 77.8 44 75.0
BcaB01g06129 Brassica carinata HOM05D005218 ORTHO05D006657 1.1e-08 66.2 41 73.2
RcHm_v2.0_Chr2g0163341 Rosa chinensis HOM05D005218 ORTHO05D006657 2.1e-07 62.0 39 74.4


User provided reference genes

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