Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08958 Vaccinium macrocarpon HOM05D007287 ORTHO05D008965 3.1e-125 451.8 233 100.0
Rhsim04G0120200 Rhododendron simsii HOM05D007287 ORTHO05D008965 5.6e-98 361.3 235 77.9
Dinv16928 Davidia involucrata HOM05D007287 ORTHO05D008965 2.2e-62 243.0 247 59.1
CSS0006882 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 4.2e-61 238.8 251 57.8
CSS0027605 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 7.1e-61 238.0 254 57.1
Actinidia20808 Actinidia chinensis HOM05D007287 ORTHO05D008965 1.1e-53 214.2 210 58.1
Thecc.04G001200 Theobroma cacao HOM05D007287 ORTHO05D008965 1.1e-45 187.6 249 46.2
GSVIVG01029850001 Vitis vinifera HOM05D007287 ORTHO05D008965 3.5e-44 182.6 219 49.3
Oeu039292.1 Olea europaea HOM05D007287 ORTHO05D008965 8.7e-43 177.9 197 49.7
Manes.08G167300 Manihot esculenta HOM05D007287 ORTHO05D008965 2.8e-41 172.9 251 42.6
Gohir.A02G000300 Gossypium hirsutum HOM05D007287 ORTHO05D008965 2.4e-40 169.9 238 42.4
Haze_21214 Corylus avellana HOM05D007287 ORTHO05D008965 1.2e-39 167.5 197 48.2
Peaxi162Scf00732g00008 Petunia axillaris HOM05D007287 ORTHO05D008965 1.2e-39 167.5 241 43.2
Ciclev10012636m.g Citrus clementina HOM05D007287 ORTHO05D008965 1.5e-39 167.2 242 44.6
Manes.09G120600 Manihot esculenta HOM05D007287 ORTHO05D008965 2.6e-39 166.4 246 42.3
QL07p031465 Quercus lobata HOM05D007287 ORTHO05D008965 2.6e-39 166.4 233 45.1
QL07p030582 Quercus lobata HOM05D007287 ORTHO05D008965 3.4e-39 166.0 233 45.1
Potri.006G112600 Populus trichocarpa HOM05D007287 ORTHO05D008965 4.5e-39 165.6 195 51.3
Gohir.D02G000600 Gossypium hirsutum HOM05D007287 ORTHO05D008965 1.7e-38 163.7 238 40.3
Gorai.005G001000 Gossypium raimondii HOM05D007287 ORTHO05D008965 1.7e-38 163.7 238 40.3
Potri.016G142100 Populus trichocarpa HOM05D007287 ORTHO05D008965 1.7e-38 163.7 196 50.0
Lsat_1_v5_gn_5_153761 Lactuca sativa HOM05D007287 ORTHO05D008965 8.5e-38 161.4 239 43.1
Sc20g0007340 Simmondsia chinensis HOM05D007287 ORTHO05D008965 1.1e-37 161.0 251 42.2
Sc20g0007530 Simmondsia chinensis HOM05D007287 ORTHO05D008965 1.1e-37 161.0 251 42.2
Sabra06G0087700 Salix brachista HOM05D007287 ORTHO05D008965 1.4e-37 160.6 218 47.2
ECA248G0550 Erigeron canadensis HOM05D007287 ORTHO05D008965 1.9e-37 160.2 235 43.8
Nn5g26760 Nelumbo nucifera HOM05D007287 ORTHO05D008965 3.2e-37 159.5 229 44.5
Cfa016991 Carpinus fangiana HOM05D007287 ORTHO05D008965 5.5e-37 158.7 197 47.2
AUR62006459 Chenopodium quinoa HOM05D007287 ORTHO05D008965 2.1e-36 156.8 198 47.5
Sabra04G0158300 Salix brachista HOM05D007287 ORTHO05D008965 2.1e-36 156.8 198 46.5
AUR62029815 Chenopodium quinoa HOM05D007287 ORTHO05D008965 2.7e-36 156.4 198 48.0
TAR633G2304 Trochodendron aralioides HOM05D007287 ORTHO05D008965 6.1e-36 155.2 249 42.6
TWI74G0480 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 5.1e-35 152.1 197 48.2
Prupe.6G299000 Prunus persica HOM05D007287 ORTHO05D008965 6.7e-35 151.8 234 41.5
Ah.02g119260 Amaranthus hybridus HOM05D007287 ORTHO05D008965 8.7e-35 151.4 193 46.6
Duzib268G0768 Durio zibethinus HOM05D007287 ORTHO05D008965 1.1e-34 151.0 235 40.0
FvH4_6g09290 Fragaria vesca HOM05D007287 ORTHO05D008965 1.9e-34 150.2 192 47.9
FAN09G3442 Fragaria x ananassa HOM05D007287 ORTHO05D008965 1.9e-34 150.2 192 48.4
EL10Ac6g15481 Beta vulgaris HOM05D007287 ORTHO05D008965 1.3e-33 147.5 227 44.1
Cpa.g.sc60.59 Carica papaya HOM05D007287 ORTHO05D008965 1.7e-33 147.1 236 41.9
Nitab4.5_0002785g0030 Nicotiana tabacum HOM05D007287 ORTHO05D008965 2.8e-33 146.4 242 40.1
Atru.chr8.50 Acer truncatum HOM05D007287 ORTHO05D008965 4.8e-33 145.6 239 41.4
RcHm_v2.0_Chr3g0459671 Rosa chinensis HOM05D007287 ORTHO05D008965 8.2e-33 144.8 229 43.2
MD04G1179200 Malus domestica HOM05D007287 ORTHO05D008965 1.4e-32 144.1 206 45.1
MSTRG.26833 Avicennia marina HOM05D007287 ORTHO05D008965 3.1e-32 142.9 234 41.5
Nitab4.5_0000356g0060 Nicotiana tabacum HOM05D007287 ORTHO05D008965 3.1e-32 142.9 244 41.0
HanXRQChr11g0345021 Helianthus annuus HOM05D007287 ORTHO05D008965 4.1e-32 142.5 241 41.9
MBI15_g22001_MAGBIO Magnolia biondii HOM05D007287 ORTHO05D008965 7.7e-31 138.3 233 41.6
PSO384G1025 Papaver somniferum HOM05D007287 ORTHO05D008965 2.2e-30 136.7 253 36.8
Glyma.03G000900 Glycine max HOM05D007287 ORTHO05D008965 2.9e-30 136.3 197 44.7
Glyma.16G221800 Glycine max HOM05D007287 ORTHO05D008965 3.8e-30 136.0 199 44.7
PGSC0003DMG400020867 Solanum tuberosum HOM05D007287 ORTHO05D008965 5.5e-29 132.1 243 36.6
MBI15_g05588_MAGBIO Magnolia biondii HOM05D007287 ORTHO05D008965 7.2e-29 131.7 194 43.3
PSO339G4161 Papaver somniferum HOM05D007287 ORTHO05D008965 9.4e-29 131.3 262 36.6
CsaV3_4G027460 Cucumis sativus L. HOM05D007287 ORTHO05D008965 3.6e-28 129.4 251 39.4
TWI77G0104 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 3.6e-28 129.4 248 37.1
ClCG04G006100 Citrullus lanatus HOM05D007287 ORTHO05D008965 6.1e-28 128.6 251 39.8
VMungo0331G1821 Vigna mungo HOM05D007287 ORTHO05D008965 2.3e-27 126.7 221 39.4
Eucgr.K01309 Eucalyptus grandis HOM05D007287 ORTHO05D008965 6.7e-27 125.2 199 40.7
Phvul.010G060000 Phaseolus vulgaris HOM05D007287 ORTHO05D008965 1.1e-26 124.4 223 39.9
Solyc09g031900.4 Solanum lycopersicum HOM05D007287 ORTHO05D008965 1.1e-26 124.4 239 36.0
Lj3g0024711 Lotus japonicus HOM05D007287 ORTHO05D008965 2.0e-26 123.6 234 39.3
Gohir.A05G415801 Gossypium hirsutum HOM05D007287 ORTHO05D008965 4.4e-26 122.5 223 38.1
Sopen09g026010 Solanum pennellii HOM05D007287 ORTHO05D008965 4.4e-26 122.5 239 36.0
Aqoxy2G01629 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 9.7e-26 121.3 217 36.9
CAN.G616.24 Capsicum annuum HOM05D007287 ORTHO05D008965 9.7e-26 121.3 190 40.0
FAN02G3892 Fragaria x ananassa HOM05D001484 ORTHO05D008965 2.2e-25 120.2 166 45.2
DCAR_014750 Daucus carota HOM05D007287 ORTHO05D008965 1.8e-24 117.1 213 41.3
PGR031G1010 Punica granatum HOM05D007287 ORTHO05D008965 5.3e-24 115.5 192 40.6
Sed0017124 Sechium edule HOM05D007287 ORTHO05D008965 1.2e-23 114.4 237 37.1
TWI53G0571 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 2.6e-23 113.2 184 41.8
Gohir.A05G415501 Gossypium hirsutum HOM05D007287 ORTHO05D008965 3.8e-22 109.4 223 35.4
MELO3C025269.2 Cucumis melo HOM05D007287 ORTHO05D008965 6.5e-22 108.6 225 38.7
Actinidia32578 Actinidia chinensis HOM05D007287 ORTHO05D008965 1.1e-21 107.8 134 47.8
Cc06_g00120 Coffea canephora HOM05D007287 ORTHO05D008965 7.2e-21 105.1 180 40.0
arahy.Tifrunner.gnm1.ann1.K8RLSB Arachis hypogaea HOM05D007287 ORTHO05D008965 3.0e-19 99.8 187 39.6
arahy.Tifrunner.gnm1.ann1.HN5ZMV Arachis hypogaea HOM05D007287 ORTHO05D008965 3.9e-19 99.4 188 40.4
SGA_v2.0_scaffold240G44057 Striga asiatica HOM05D007287 ORTHO05D008965 5.2e-19 99.0 162 40.7
CANSAT01G2619 Cannabis sativa HOM05D007287 ORTHO05D008965 8.8e-19 98.2 235 29.8
Aqoxy1G02348 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 3.3e-18 96.3 149 40.9
DCAR_023246 Daucus carota HOM05D007287 ORTHO05D008965 3.3e-18 96.3 232 36.2
CDE07G0622 Ceratophyllum demersum HOM05D007287 ORTHO05D008965 2.2e-17 93.6 188 34.0
VMungo1127G2237 Vigna mungo HOM05D007287 ORTHO05D008965 2.2e-17 93.6 192 37.0
CDE06G1816 Ceratophyllum demersum HOM05D005836 ORTHO05D007335 6.3e-17 92.0 189 33.9
Aqoxy1G03140 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 1.1e-16 91.3 148 39.9
HPP92_015439 Vanilla planifolia HOM05D007287 ORTHO05D008965 4.1e-16 89.4 169 36.1
TPR.G30730 Trifolium pratense HOM05D007287 ORTHO05D008965 4.5e-15 85.9 206 34.5
Lalb_Chr13g0290321 Lupinus albus HOM05D007287 ORTHO05D008965 6.5e-14 82.0 227 32.6
THA.LOC104806658 Tarenaya hassleriana HOM05D009615 ORTHO05D011760 8.5e-14 81.6 173 34.7
Medtr8g005070 Medicago truncatula HOM05D007287 ORTHO05D008965 1.1e-13 81.3 194 37.1
Os12g0119700 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 1.1e-13 81.3 238 31.1
Zm00001eb078960 Zea mays HOM05D007287 ORTHO05D008965 1.9e-13 80.5 169 33.7
Gohir.A12G000800 Gossypium hirsutum HOM05D007287 ORTHO05D008965 3.2e-13 79.7 101 43.6
HanXRQChr10g0286721 Helianthus annuus HOM05D007287 ORTHO05D008965 3.2e-13 79.7 164 32.3
VMungo0464G2164 Vigna mungo HOM05D007287 ORTHO05D008965 4.2e-13 79.3 150 40.7
Os11g0119900 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 9.4e-13 78.2 253 30.8
ATR1127G180 Amborella trichopoda HOM05D007287 ORTHO05D008965 3.6e-12 76.3 245 31.0
HPP92_018079 Vanilla planifolia HOM05D007287 ORTHO05D008965 2.3e-11 73.6 159 32.7
DCAR_010225 Daucus carota HOM05D054201 ORTHO05D008965 8.8e-11 71.6 233 30.9
DCAR_011429 Daucus carota HOM05D054201 ORTHO05D008965 8.8e-11 71.6 236 30.1
Os12g0119350 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 2.0e-10 70.5 251 31.1
COL.COLO4_12535 Corchorus olitorius HOM05D007287 ORTHO05D008965 2.8e-09 66.6 133 37.6
ECA247G1060 Erigeron canadensis HOM05D051946 ORTHO05D008965 3.7e-09 66.2 186 32.3
Migut.L02048 Erythranthe guttata HOM05D007287 ORTHO05D008965 3.7e-09 66.2 160 38.1
Eucgr.A00853 Eucalyptus grandis HOM05D007287 ORTHO05D008965 6.3e-09 65.5 218 27.1
Ca_18907_v3 Cicer arietinum L. HOM05D007287 ORTHO05D008965 7.7e-07 58.5 105 39.0
Psat7g166880 Pisum sativum HOM05D007287 ORTHO05D008965 5.0e-06 55.8 48 52.1
Psat2g191120 Pisum sativum HOM05D007287 ORTHO05D008965 6.5e-06 55.5 185 31.9


User provided reference genes

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