Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08924 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 3.6e-123 444.9 221 100.0
vmacro22564 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 1.5e-92 343.2 170 100.0
vmacro19638 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 2.2e-88 329.3 221 78.3
Rhsim05G0143800 Rhododendron simsii HOM05D004389 ORTHO05D005457 1.2e-81 307.0 221 74.2
Actinidia05713 Actinidia chinensis HOM05D004389 ORTHO05D005457 9.7e-76 287.3 221 70.1
CSS0010710 Camellia sinensis var. sinensis HOM05D004389 ORTHO05D005457 3.4e-73 278.9 221 67.4
Dinv23968 Davidia involucrata HOM05D004389 ORTHO05D005457 1.9e-71 273.1 221 67.4
Haze_23899 Corylus avellana HOM05D004389 ORTHO05D005457 4.2e-71 271.9 220 67.3
Sabra13G0026700 Salix brachista HOM05D004389 ORTHO05D005457 1.2e-70 270.4 229 65.1
Haze_04228 Corylus avellana HOM05D004389 ORTHO05D005457 7.9e-70 267.7 221 67.0
GSVIVG01006266001 Vitis vinifera HOM05D004389 ORTHO05D005457 7.9e-70 267.7 221 65.6
Hund07052 Selenicereus undatus HOM05D004389 ORTHO05D005457 2.3e-69 266.2 212 65.6
Potri.005G036500 Populus trichocarpa HOM05D004389 ORTHO05D005457 5.2e-69 265.0 221 63.3
Ciclev10018002m.g Citrus clementina HOM05D004389 ORTHO05D005457 6.7e-69 264.6 221 66.1
Hma1.2p1_0666F.1_g199560 Hydrangea macrophylla HOM05D004389 ORTHO05D005457 8.8e-69 264.2 221 65.2
Hma1.2p1_1362F.1_g278175 Hydrangea macrophylla HOM05D004389 ORTHO05D005457 8.8e-69 264.2 221 65.2
CSS0006579 Camellia sinensis var. sinensis HOM05D004389 ORTHO05D005457 1.5e-68 263.5 221 65.2
Lj7A473T46 Lonicera japonica HOM05D004389 ORTHO05D005457 3.3e-68 262.3 222 65.8
QL03p004595 Quercus lobata HOM05D004389 ORTHO05D005457 7.4e-68 261.2 220 65.0
CiPaw.07G015300 Carya illinoinensis HOM05D004389 ORTHO05D005457 9.7e-68 260.8 220 65.0
Sabra05G0037000 Salix brachista HOM05D004389 ORTHO05D005457 9.7e-68 260.8 217 63.6
Duzib177G0146 Durio zibethinus HOM05D004389 ORTHO05D005457 1.3e-67 260.4 221 64.3
Nn8g41138 Nelumbo nucifera HOM05D004389 ORTHO05D005457 2.8e-67 259.2 216 67.1
COL.COLO4_29544 Corchorus olitorius HOM05D004389 ORTHO05D005457 3.7e-67 258.8 221 63.3
Thecc.05G307100 Theobroma cacao HOM05D004389 ORTHO05D005457 4.8e-67 258.5 221 63.8
FvH4_6g05471 Fragaria vesca HOM05D004389 ORTHO05D005457 8.2e-67 257.7 221 64.3
Manes.09G078200 Manihot esculenta HOM05D004389 ORTHO05D005457 1.1e-66 257.3 221 63.8
Cfa006553 Carpinus fangiana HOM05D004389 ORTHO05D003318 1.4e-66 256.9 215 65.1
FAN05G0231 Fragaria x ananassa HOM05D004389 ORTHO05D005457 1.4e-66 256.9 221 64.3
FAN05G0672 Fragaria x ananassa HOM05D004389 ORTHO05D005457 1.4e-66 256.9 221 64.3
Glyma.05G086900 Glycine max HOM05D004389 ORTHO05D005457 1.8e-66 256.5 210 65.7
Nitab4.5_0002329g0100 Nicotiana tabacum HOM05D004389 ORTHO05D005457 1.8e-66 256.5 221 62.4
TAR383G0075 Trochodendron aralioides HOM05D004389 ORTHO05D005457 1.8e-66 256.5 222 64.0
COL.COLO4_19842 Corchorus olitorius HOM05D004389 ORTHO05D005457 2.4e-66 256.1 221 63.3
Atru.chr2.467 Acer truncatum HOM05D004389 ORTHO05D005457 3.1e-66 255.8 221 63.3
LjContig00312_ERROPOS870357g0027537 Lotus japonicus HOM05D004389 ORTHO05D005457 4.1e-66 255.4 210 65.2
Nitab4.5_0002659g0010 Nicotiana tabacum HOM05D004389 ORTHO05D005457 7.0e-66 254.6 211 64.0
Sc16g0008410 Simmondsia chinensis HOM05D004389 ORTHO05D005457 7.0e-66 254.6 216 62.5
Aqoxy7G01925 Aquilegia oxysepala HOM05D004389 ORTHO05D005457 9.1e-66 254.2 223 62.8
Duzib128G0997 Durio zibethinus HOM05D004389 ORTHO05D005457 9.1e-66 254.2 221 62.4
Potri.013G025600 Populus trichocarpa HOM05D004389 ORTHO05D005457 9.1e-66 254.2 221 61.1
PGR031G3032 Punica granatum HOM05D004389 ORTHO05D005457 9.1e-66 254.2 210 64.8
TWI73G0431 Tripterygium wilfordii HOM05D004389 ORTHO05D005457 9.1e-66 254.2 210 64.8
Lj9C683G9 Lonicera japonica HOM05D004389 ORTHO05D005457 1.6e-65 253.4 220 63.2
EL10Ac4g09330 Beta vulgaris HOM05D004389 ORTHO05D005457 2.0e-65 253.1 219 60.3
CANSAT21G2311 Cannabis sativa HOM05D004389 ORTHO05D005457 2.0e-65 253.1 220 62.7
Gohir.A08G211800 Gossypium hirsutum HOM05D004389 ORTHO05D005457 2.0e-65 253.1 220 62.7
DCAR_008416 Daucus carota HOM05D004389 ORTHO05D005457 2.6e-65 252.7 219 63.5
FAN09G0842 Fragaria x ananassa HOM05D004389 ORTHO05D005457 4.5e-65 251.9 221 63.8
FAN18G1342 Fragaria x ananassa HOM05D004389 ORTHO05D005457 4.5e-65 251.9 221 62.4
Lj1g0012007 Lotus japonicus HOM05D004389 ORTHO05D005457 4.5e-65 251.9 210 64.3
Glyma.06G240600 Glycine max HOM05D004389 ORTHO05D005457 5.9e-65 251.5 211 65.4
Cc02_g33710 Coffea canephora HOM05D004389 ORTHO05D005457 7.7e-65 251.1 221 62.9
FAN05G1752 Fragaria x ananassa HOM05D004389 ORTHO05D005457 7.7e-65 251.1 221 63.3
RcHm_v2.0_Chr3g0454251 Rosa chinensis HOM05D004389 ORTHO05D005457 7.7e-65 251.1 221 63.3
CANSAT21G1920 Cannabis sativa HOM05D004389 ORTHO05D005457 1.3e-64 250.4 220 62.3
Ciclev10002655m.g Citrus clementina HOM05D004389 ORTHO05D005457 1.3e-64 250.4 212 65.1
FAN05G0500 Fragaria x ananassa HOM05D004389 ORTHO05D005457 1.3e-64 250.4 221 62.9
FAN14G5008 Fragaria x ananassa HOM05D004389 ORTHO05D005457 1.7e-64 250.0 221 63.3
Gorai.004G242800 Gossypium raimondii HOM05D004389 ORTHO05D005457 2.2e-64 249.6 220 61.8
Medtr3g115100 Medicago truncatula HOM05D004389 ORTHO05D005457 2.2e-64 249.6 221 62.9
TPR.G33525 Trifolium pratense HOM05D004389 ORTHO05D005457 2.2e-64 249.6 221 63.3
TAR626G0408 Trochodendron aralioides HOM05D004389 ORTHO05D005457 2.2e-64 249.6 221 63.3
MD04G1208300 Malus domestica HOM05D004389 ORTHO05D005457 2.9e-64 249.2 221 62.4
PGSC0003DMG400030976 Solanum tuberosum HOM05D004389 ORTHO05D005457 2.9e-64 249.2 221 61.5
CsaV3_1G039140 Cucumis sativus L. HOM05D004389 ORTHO05D005457 3.8e-64 248.8 209 64.1
Sed0018697 Sechium edule HOM05D004389 ORTHO05D005457 6.5e-64 248.1 219 62.1
Sopen12g004700 Solanum pennellii HOM05D004389 ORTHO05D005457 6.5e-64 248.1 221 62.0
Prupe.6G329200 Prunus persica HOM05D004389 ORTHO05D005457 8.5e-64 247.7 221 62.9
Solyc12g009810.3 Solanum lycopersicum HOM05D004389 ORTHO05D005457 8.5e-64 247.7 216 61.1
MBI16_g00840_MAGBIO Magnolia biondii HOM05D004389 ORTHO05D005457 1.1e-63 247.3 221 60.6
PSO063G2909 Papaver somniferum HOM05D004389 ORTHO05D005457 1.1e-63 247.3 219 61.2
HanXRQChr14g0460141 Helianthus annuus HOM05D004389 ORTHO05D005457 1.5e-63 246.9 221 60.2
arahy.Tifrunner.gnm1.ann1.95MSG7 Arachis hypogaea HOM05D004389 ORTHO05D005457 2.5e-63 246.1 221 59.3
Cpa.g.sc58.76 Carica papaya HOM05D004389 ORTHO05D005457 2.5e-63 246.1 221 60.2
ClCG03G016830 Citrullus lanatus HOM05D004389 ORTHO05D005457 2.5e-63 246.1 209 63.6
PGSC0003DMG402007838 Solanum tuberosum HOM05D004389 ORTHO05D005457 2.5e-63 246.1 221 61.5
Gohir.D08G228501 Gossypium hirsutum HOM05D004389 ORTHO05D005457 3.2e-63 245.7 220 61.4
PSO782G4098 Papaver somniferum HOM05D004389 ORTHO05D005457 3.2e-63 245.7 220 60.5
Nitab4.5_0000401g0080 Nicotiana tabacum HOM05D004389 ORTHO05D005457 4.2e-63 245.4 221 61.1
Phvul.007G101500 Phaseolus vulgaris HOM05D004389 ORTHO05D005457 4.2e-63 245.4 211 64.5
Ah.04g159790 Amaranthus hybridus HOM05D004389 ORTHO05D005457 9.4e-63 244.2 218 59.6
AUR62006921 Chenopodium quinoa HOM05D004389 ORTHO05D005457 1.6e-62 243.4 219 58.9
MELO3C015339.2 Cucumis melo HOM05D004389 ORTHO05D005457 2.7e-62 242.7 209 63.2
Eucgr.H04472 Eucalyptus grandis HOM05D004389 ORTHO05D005457 4.7e-62 241.9 221 60.6
Medtr3g096610 Medicago truncatula HOM05D004389 ORTHO05D005457 6.1e-62 241.5 210 63.3
AUR62005084 Chenopodium quinoa HOM05D004389 ORTHO05D005457 1.0e-61 240.7 218 58.3
Oeu045484.1 Olea europaea HOM05D004389 ORTHO05D005457 1.0e-61 240.7 216 61.1
Migut.N00707 Erythranthe guttata HOM05D004389 ORTHO05D005457 1.4e-61 240.4 221 58.4
FvH4_5g27531 Fragaria vesca HOM05D004389 ORTHO05D005457 1.8e-61 240.0 213 62.0
TWI53G0891 Tripterygium wilfordii HOM05D004389 ORTHO05D005457 2.3e-61 239.6 208 62.0
ECA236G1487 Erigeron canadensis HOM05D004389 ORTHO05D005457 3.0e-61 239.2 219 58.9
CDE02G2165 Ceratophyllum demersum HOM05D004389 ORTHO05D005457 1.1e-60 237.3 209 61.2
BcaNung00158 Brassica carinata HOM05D004389 ORTHO05D005457 2.0e-60 236.5 210 61.0
AUR62000890 Chenopodium quinoa HOM05D004389 ORTHO05D005457 2.0e-60 236.5 213 59.6
SGA_v2.0_scaffold11G05813 Striga asiatica HOM05D004389 ORTHO05D005457 5.7e-60 235.0 210 60.5
Sp7g15350 Schrenkiella parvula HOM05D004389 ORTHO05D005457 9.7e-60 234.2 221 57.9
SGA_v2.0_scaffold16G07733 Striga asiatica HOM05D004389 ORTHO05D005457 9.7e-60 234.2 210 61.0
A01p20570 Brassica napus HOM05D004389 ORTHO05D005457 1.3e-59 233.8 210 60.0
THA.LOC104805865 Tarenaya hassleriana HOM05D004389 ORTHO05D005457 1.3e-59 233.8 216 58.3
BcaB03g14176 Brassica carinata HOM05D004389 ORTHO05D005457 1.7e-59 233.4 210 60.0
BcaC09g50404 Brassica carinata HOM05D004389 ORTHO05D005457 1.7e-59 233.4 210 59.5
C01p25870 Brassica napus HOM05D004389 ORTHO05D005457 1.7e-59 233.4 210 59.5
Aa31sc17G40 Aethionema arabicum HOM05D004389 ORTHO05D005457 2.2e-59 233.0 213 59.2
BraA01t01985Z Brassica rapa HOM05D004389 ORTHO05D005457 2.2e-59 233.0 210 60.0
BolC1t02532H Brassica oleracea HOM05D004389 ORTHO05D005457 3.7e-59 232.3 210 59.0
Aa31sc17G90 Aethionema arabicum HOM05D004389 ORTHO05D005457 4.8e-59 231.9 216 57.9
Carub.0007s2468 Capsella rubella HOM05D004389 ORTHO05D005457 1.8e-58 229.9 216 58.3
CARHR223240 Cardamine hirsuta HOM05D004389 ORTHO05D005457 1.8e-58 229.9 216 57.9
Zm00001eb264580 Zea mays HOM05D004389 ORTHO05D005457 1.8e-58 229.9 210 61.0
Zm00001eb272600 Zea mays HOM05D004389 ORTHO05D005457 1.8e-58 229.9 208 60.1
ATR0626G001 Amborella trichopoda HOM05D004389 ORTHO05D005457 3.5e-57 225.7 221 55.7
unitig_747.g21568 Utricularia gibba HOM05D004389 ORTHO05D005457 3.5e-57 225.7 213 58.2
GSVIVG01000019001 Vitis vinifera HOM05D004389 ORTHO05D005457 3.5e-57 225.7 199 63.8
Lsat_1_v5_gn_7_96081 Lactuca sativa HOM05D004389 ORTHO05D005457 1.0e-56 224.2 221 58.4
AL7G38020 Arabidopsis lyrata HOM05D004389 ORTHO05D005457 2.2e-56 223.0 213 56.8
AUR62000567 Chenopodium quinoa HOM05D004389 ORTHO05D005457 2.2e-56 223.0 201 58.7
HPP92_010418 Vanilla planifolia HOM05D004389 ORTHO05D005457 3.8e-56 222.2 210 59.0
Thhalv10026361m.g Eutrema salsugineum HOM05D004389 ORTHO05D005457 8.5e-56 221.1 221 55.2
Peaxi162Scf00523g00530 Petunia axillaris HOM05D004389 ORTHO05D005457 1.1e-55 220.7 221 57.0
AT4G16710 Arabidopsis thaliana HOM05D004389 ORTHO05D005457 1.9e-55 219.9 213 56.3
Rhsim05G0010600 Rhododendron simsii HOM05D004389 ORTHO05D005457 1.6e-54 216.9 254 52.8
SEGI_15909 Sequoiadendron giganteum HOM05D004389 ORTHO05D005457 1.5e-52 210.3 216 53.2
HanXRQChr04g0126711 Helianthus annuus HOM05D004389 ORTHO05D005457 2.2e-51 206.5 209 56.5
Psat0s2070g0160 Pisum sativum HOM05D004389 ORTHO05D005457 3.7e-51 205.7 191 60.7
Psat0s1802g0120 Pisum sativum HOM05D004389 ORTHO05D005457 1.1e-50 204.1 191 60.2
RcHm_v2.0_Chr7g0218901 Rosa chinensis HOM05D004389 ORTHO05D005457 3.1e-50 202.6 189 59.8
Lalb_Chr05g0219701 Lupinus albus HOM05D004389 ORTHO05D005457 4.1e-50 202.2 221 52.5
Dinv40263 Davidia involucrata HOM05D004389 ORTHO05D005457 5.7e-44 181.8 161 64.6
Peaxi162Scf02135g00022 Petunia axillaris HOM05D004389 ORTHO05D005457 1.2e-41 174.1 214 49.5
Aqoxy4G02160 Aquilegia oxysepala HOM05D004389 ORTHO05D005457 2.7e-41 172.9 170 58.8
AagrBONN_evm.TU.Sc2ySwM_117.3666 Anthoceros agrestis HOM05D004389 ORTHO05D005457 1.5e-39 167.2 203 44.8
vmacro15018 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 3.6e-38 162.5 174 55.7
Os02g0467700 Oryza sativa ssp. japonica HOM05D004389 ORTHO05D005457 4.7e-38 162.2 156 59.0
AagrBONN_evm.TU.Sc2ySwM_344.4143 Anthoceros agrestis HOM05D007251 ORTHO05D009266 1.8e-37 160.2 203 43.3
Prupe.5G030200 Prunus persica HOM05D004389 ORTHO05D005457 2.6e-36 156.4 158 58.9
SMO171G0140 Selaginella moellendorffii HOM05D004389 ORTHO05D005457 2.6e-36 156.4 206 43.2
vmacro22211 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 3.4e-36 156.0 217 48.4
Mapoly0013s0083 Marchantia polymorpha HOM05D004389 ORTHO05D005457 2.2e-35 153.3 207 41.1
Pp3c11_4930 Physcomitrium patens HOM05D004389 ORTHO05D005457 2.2e-35 153.3 206 42.7
Zm00001eb058290 Zea mays HOM05D004389 ORTHO05D005457 1.3e-32 144.1 82 81.7
Ca_16978_v3 Cicer arietinum L. HOM05D004389 ORTHO05D005457 8.6e-32 141.4 87 81.6
TPR.G33563 Trifolium pratense HOM05D004389 ORTHO05D005457 1.1e-31 141.0 83 81.9
RhsimUnG0192500 Rhododendron simsii HOM05D004389 ORTHO05D005457 4.7e-30 135.6 83 79.5
Cre13.g585850 Chlamydomonas reinhardtii HOM05D004389 ORTHO05D005457 1.0e-29 134.4 216 39.8
Aqoxy5G02271 Aquilegia oxysepala HOM05D004389 ORTHO05D005457 3.1e-29 132.9 94 68.1
PRCOL_00003734 Prasinoderma coloniale HOM05D004389 ORTHO05D005457 3.1e-29 132.9 202 40.1
CBR_g24390 Chara braunii HOM05D004389 ORTHO05D005457 6.8e-29 131.7 222 39.2
CAN.G551.74 Capsicum annuum HOM05D004389 ORTHO05D005457 7.5e-28 128.3 94 70.2
SHI18162 Sapria himalayana HOM05D004389 ORTHO05D005457 4.9e-27 125.6 161 47.2
Nitab4.5_0006964g0010 Nicotiana tabacum HOM05D004389 ORTHO05D005457 1.4e-26 124.0 94 66.0
TPR.G30972 Trifolium pratense HOM05D004389 ORTHO05D005457 7.8e-25 118.2 83 69.9
MCO09G816 Micromonas commoda HOM05D004389 ORTHO05D005457 2.3e-24 116.7 206 36.4
QL07p009462 Quercus lobata HOM05D004389 ORTHO05D005457 4.3e-23 112.5 77 74.0
FvH4_6g10990 Fragaria vesca HOM05D004389 ORTHO05D005457 5.6e-23 112.1 89 67.4
MD15G1188200 Malus domestica HOM05D004389 ORTHO05D005457 9.5e-23 111.3 158 45.6
Zm00001eb380920 Zea mays HOM05D004389 ORTHO05D005457 1.8e-21 107.1 84 65.5
Actinidia39666 Actinidia chinensis HOM05D004389 ORTHO05D056204 1.0e-16 91.3 185 36.8
Cfa025624 Carpinus fangiana HOM05D004389 ORTHO05D125512 4.7e-14 82.4 239 31.4
SHI18161 Sapria himalayana HOM05D004389 ORTHO05D005457 6.8e-13 78.6 55 65.5
vmacro15154 Vaccinium macrocarpon HOM05D004389 ORTHO05D022937 4.4e-12 75.9 56 62.5
Medtr6g452950 Medicago truncatula HOM05D029366 ORTHO05D022937 1.0e-08 64.7 42 66.7
QL07p009230 Quercus lobata HOM05D004389 ORTHO05D005457 1.7e-08 63.9 47 63.8
HPP92_010328 Vanilla planifolia HOM05D004389 ORTHO05D022937 1.1e-07 61.2 44 61.4
vmacro17239 Vaccinium macrocarpon HOM05D040504 ORTHO05D426804 1.5e-07 60.8 144 33.3


User provided reference genes

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