Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08909 Vaccinium macrocarpon HOM05D001655 ORTHO05D001567 5.2e-37 157.1 76 100.0
MBI15_g16139_MAGBIO Magnolia biondii HOM05D001655 ORTHO05D001567 2.3e-08 62.0 60 51.7
Nitab4.5_0000230g0250 Nicotiana tabacum HOM05D001655 ORTHO05D001567 1.1e-07 59.7 56 55.4
Actinidia13012 Actinidia chinensis HOM05D001655 ORTHO05D001567 1.5e-07 59.3 37 73.0
Actinidia20769 Actinidia chinensis HOM05D001655 ORTHO05D001567 1.5e-07 59.3 37 73.0
ATR0594G201 Amborella trichopoda HOM05D001655 ORTHO05D001567 3.3e-07 58.2 37 70.3
QL07p033935 Quercus lobata HOM05D001655 ORTHO05D001567 3.3e-07 58.2 37 70.3
Actinidia32544 Actinidia chinensis HOM05D001655 ORTHO05D001567 5.6e-07 57.4 37 70.3
THA.LOC104816181 Tarenaya hassleriana HOM05D001655 ORTHO05D001567 5.6e-07 57.4 37 70.3
A03p00160 Brassica napus HOM05D001655 ORTHO05D001567 9.6e-07 56.6 37 67.6
C03p00310 Brassica napus HOM05D001655 ORTHO05D001567 9.6e-07 56.6 37 67.6
CiPaw.09G215300 Carya illinoinensis HOM05D001655 ORTHO05D001567 9.6e-07 56.6 37 67.6
Eucgr.K02950 Eucalyptus grandis HOM05D001655 ORTHO05D001567 9.6e-07 56.6 37 67.6
Lj3g0012119 Lotus japonicus HOM05D001655 ORTHO05D001567 9.6e-07 56.6 37 67.6
Lj3g0013309 Lotus japonicus HOM05D001655 ORTHO05D001567 9.6e-07 56.6 37 67.6
Psat7g249040 Pisum sativum HOM05D001655 ORTHO05D001567 9.6e-07 56.6 37 67.6
TAR623G0971 Trochodendron aralioides HOM05D001655 ORTHO05D001567 9.6e-07 56.6 37 67.6
TAR633G1071 Trochodendron aralioides HOM05D001655 ORTHO05D001567 9.6e-07 56.6 37 67.6
Cpa.g.sc5.238 Carica papaya HOM05D001655 ORTHO05D001567 1.2e-06 56.2 37 67.6
Duzib093G1547 Durio zibethinus HOM05D001655 ORTHO05D001567 1.2e-06 56.2 37 67.6
Duzib128G1918 Durio zibethinus HOM05D001655 ORTHO05D001567 1.2e-06 56.2 37 67.6
Gohir.A01G230000 Gossypium hirsutum HOM05D001655 ORTHO05D001567 1.2e-06 56.2 37 67.6
Gohir.D01G219900 Gossypium hirsutum HOM05D001655 ORTHO05D001567 1.2e-06 56.2 37 67.6
Gorai.002G266600 Gossypium raimondii HOM05D001655 ORTHO05D001567 1.2e-06 56.2 37 67.6
Manes.08G097000 Manihot esculenta HOM05D001655 ORTHO05D001567 1.2e-06 56.2 37 67.6
Manes.09G111500 Manihot esculenta HOM05D001655 ORTHO05D001567 1.2e-06 56.2 37 67.6
Oeu042870.1 Olea europaea HOM05D001655 ORTHO05D001567 1.2e-06 56.2 37 67.6
Prupe.6G284800 Prunus persica HOM05D001655 ORTHO05D001567 1.2e-06 56.2 37 67.6
Thecc.05G006800 Theobroma cacao HOM05D001655 ORTHO05D001567 1.2e-06 56.2 37 67.6
BcaB01g06111 Brassica carinata HOM05D001655 ORTHO05D001567 1.6e-06 55.8 37 64.9
BolC3t12597H Brassica oleracea HOM05D001655 ORTHO05D001567 1.6e-06 55.8 37 64.9
CsaV3_4G026750 Cucumis sativus L. HOM05D000490 ORTHO05D001398 1.6e-06 55.8 37 67.6
Thhalv10015051m.g Eutrema salsugineum HOM05D001655 ORTHO05D001567 1.6e-06 55.8 37 64.9
FAN09G4853 Fragaria x ananassa HOM05D001655 ORTHO05D001567 1.6e-06 55.8 37 67.6
RcHm_v2.0_Chr3g0461621 Rosa chinensis HOM05D001655 ORTHO05D001567 1.6e-06 55.8 37 67.6
THA.LOC104827060 Tarenaya hassleriana HOM05D001655 ORTHO05D001567 2.1e-06 55.5 37 67.6
Actinidia11550 Actinidia chinensis HOM05D001655 ORTHO05D001567 2.8e-06 55.1 37 67.6
Ah.12g059080 Amaranthus hybridus HOM05D001655 ORTHO05D001567 2.8e-06 55.1 37 64.9
Aqoxy2G00774 Aquilegia oxysepala HOM05D001655 ORTHO05D001567 2.8e-06 55.1 37 64.9
BcaB01g06244 Brassica carinata HOM05D001655 ORTHO05D001567 2.8e-06 55.1 37 64.9
CDE07G1674 Ceratophyllum demersum HOM05D001655 ORTHO05D001567 2.8e-06 55.1 37 62.2
AUR62030760 Chenopodium quinoa HOM05D001655 ORTHO05D001567 2.8e-06 55.1 37 64.9
Cc06_g00750 Coffea canephora HOM05D001655 ORTHO05D001567 2.8e-06 55.1 37 64.9
Hund14930 Selenicereus undatus HOM05D001655 ORTHO05D001567 2.8e-06 55.1 37 64.9
vmacro20326 Vaccinium macrocarpon HOM05D001655 ORTHO05D001567 2.8e-06 55.1 37 67.6
CARHR212010 Cardamine hirsuta HOM05D001655 ORTHO05D001567 3.6e-06 54.7 37 64.9
CDE04G2421 Ceratophyllum demersum HOM05D001655 ORTHO05D001567 3.6e-06 54.7 37 62.2
MELO3C026027.2 Cucumis melo HOM05D001655 ORTHO05D001567 3.6e-06 54.7 37 64.9
Lj1g0013561 Lotus japonicus HOM05D001655 ORTHO05D001567 3.6e-06 54.7 37 64.9
Lalb_Chr03g0043491 Lupinus albus HOM05D001655 ORTHO05D001567 3.6e-06 54.7 37 64.9
Lalb_Chr12g0207291 Lupinus albus HOM05D001655 ORTHO05D001567 3.6e-06 54.7 37 64.9
Atru.chr8.2335 Acer truncatum HOM05D001655 ORTHO05D001567 4.7e-06 54.3 37 64.9
ClCG04G006670 Citrullus lanatus HOM05D001655 ORTHO05D001567 4.7e-06 54.3 37 64.9
Duzib106G0889 Durio zibethinus HOM05D001655 ORTHO05D001567 4.7e-06 54.3 37 62.2
Sp6g40910 Schrenkiella parvula HOM05D001655 ORTHO05D001567 4.7e-06 54.3 37 64.9
VMungo1383G1192 Vigna mungo HOM05D001655 ORTHO05D001567 4.7e-06 54.3 37 64.9
Ca_13500_v3 Cicer arietinum L. HOM05D001655 ORTHO05D001567 6.2e-06 53.9 37 64.9
Dinv12167 Davidia involucrata HOM05D001655 ORTHO05D001567 6.2e-06 53.9 37 64.9
FvH4_6g10620 Fragaria vesca HOM05D001655 ORTHO05D001567 6.2e-06 53.9 37 64.9
FAN02G2625 Fragaria x ananassa HOM05D001655 ORTHO05D001567 6.2e-06 53.9 37 64.9
FAN05G0167 Fragaria x ananassa HOM05D001655 ORTHO05D001567 6.2e-06 53.9 37 64.9
FAN05G1553 Fragaria x ananassa HOM05D001655 ORTHO05D001567 6.2e-06 53.9 37 64.9
FAN14G5047 Fragaria x ananassa HOM05D001655 ORTHO05D001567 6.2e-06 53.9 37 64.9
MD04G1166600 Malus domestica HOM05D001655 ORTHO05D001567 6.2e-06 53.9 37 64.9
Rhsim05G0225700 Rhododendron simsii HOM05D001655 ORTHO05D001567 6.2e-06 53.9 63 42.9
HPP92_001130 Vanilla planifolia HOM05D001655 ORTHO05D001567 6.2e-06 53.9 37 62.2
Aa31LG1G23270 Aethionema arabicum HOM05D001655 ORTHO05D001567 8.1e-06 53.5 37 64.9
CSS0037641 Camellia sinensis var. sinensis HOM05D001655 ORTHO05D001567 8.1e-06 53.5 37 64.9
AUR62030535 Chenopodium quinoa HOM05D001655 ORTHO05D001567 8.1e-06 53.5 85 36.5
Cc11_g05490 Coffea canephora HOM05D001655 ORTHO05D001567 8.1e-06 53.5 37 62.2
PSO384G1035 Papaver somniferum HOM05D001655 ORTHO05D001567 8.1e-06 53.5 37 62.2
TPR.G5213 Trifolium pratense HOM05D001655 ORTHO05D001567 8.1e-06 53.5 37 62.2
GSVIVG01030269001 Vitis vinifera HOM05D001655 ORTHO05D001567 8.1e-06 53.5 37 64.9


User provided reference genes

Program Settings