Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08888 Vaccinium macrocarpon HOM05D000154 ORTHO05D426775 2.0e-71 272.3 134 100.0
vmacro09040 Vaccinium macrocarpon HOM05D000154 ORTHO05D000092 2.7e-20 102.4 61 83.6
vmacro16263 Vaccinium macrocarpon HOM05D000154 ORTHO05D000092 6.0e-20 101.3 61 82.0
Rhsim12G0121700 Rhododendron simsii HOM05D000154 ORTHO05D000092 6.6e-19 97.8 60 81.7
QL03p061779 Quercus lobata HOM05D000154 ORTHO05D000092 1.2e-17 93.6 60 75.0
QL07p005625 Quercus lobata HOM05D000154 ORTHO05D000092 1.2e-17 93.6 60 75.0
Cpa.g.sc69.9 Carica papaya HOM05D000154 ORTHO05D000092 2.8e-17 92.4 60 70.0
Thecc.02G245500 Theobroma cacao HOM05D000154 ORTHO05D000092 2.8e-17 92.4 60 73.3
Sabra10G0066800 Salix brachista HOM05D000154 ORTHO05D000092 3.6e-17 92.0 69 65.2
Potri.010G094400 Populus trichocarpa HOM05D000154 ORTHO05D000092 1.4e-16 90.1 60 70.0
Actinidia32583 Actinidia chinensis HOM05D000154 ORTHO05D000092 2.3e-16 89.4 61 72.1
Manes.13G031700 Manihot esculenta HOM05D000154 ORTHO05D000092 3.1e-16 89.0 60 68.3
Haze_12146 Corylus avellana HOM05D000154 ORTHO05D000092 4.0e-16 88.6 60 70.0
Cfa009108 Carpinus fangiana HOM05D000154 ORTHO05D000092 5.2e-16 88.2 60 68.3
Lj6C803T16 Lonicera japonica HOM05D000154 ORTHO05D000092 5.2e-16 88.2 60 70.0
Oeu025433.1 Olea europaea HOM05D000154 ORTHO05D000092 6.8e-16 87.8 60 70.0
Hma1.2p1_0867F.1_g230330 Hydrangea macrophylla HOM05D000154 ORTHO05D000092 8.9e-16 87.4 61 73.8
Gohir.D05G320000 Gossypium hirsutum HOM05D000154 ORTHO05D000092 1.2e-15 87.0 60 70.0
Gorai.009G343300 Gossypium raimondii HOM05D000154 ORTHO05D000092 1.2e-15 87.0 60 70.0
CANSAT01G0342 Cannabis sativa HOM05D000154 ORTHO05D000092 1.5e-15 86.7 60 65.0
SGA_v2.0_scaffold8G04232 Striga asiatica HOM05D000154 ORTHO05D000092 1.5e-15 86.7 61 65.6
Gohir.A05G318000 Gossypium hirsutum HOM05D000154 ORTHO05D000092 2.0e-15 86.3 60 68.3
Potri.008G147300 Populus trichocarpa HOM05D000154 ORTHO05D000092 2.0e-15 86.3 60 66.7
TWI18G0237 Tripterygium wilfordii HOM05D000154 ORTHO05D000092 2.0e-15 86.3 60 68.3
CiPaw.05G146900 Carya illinoinensis HOM05D000154 ORTHO05D000092 4.4e-15 85.1 60 70.0
Eucgr.B03948 Eucalyptus grandis HOM05D000154 ORTHO05D000092 4.4e-15 85.1 62 66.1
HanXRQChr15g0476691 Helianthus annuus HOM05D000154 ORTHO05D000092 4.4e-15 85.1 61 68.9
Lsat_1_v5_gn_3_48061 Lactuca sativa HOM05D000154 ORTHO05D000092 4.4e-15 85.1 61 67.2
Duzib268G1423 Durio zibethinus HOM05D000154 ORTHO05D000092 9.9e-15 84.0 61 70.5
CSS0033698 Camellia sinensis var. sinensis HOM05D000154 ORTHO05D000092 1.3e-14 83.6 63 68.3
SalBow2G2182 Salvia bowleyana HOM05D000154 ORTHO05D000092 1.7e-14 83.2 69 59.4
Migut.L01397 Erythranthe guttata HOM05D000154 ORTHO05D000092 2.9e-14 82.4 62 66.1
TAR622G0627 Trochodendron aralioides HOM05D000154 ORTHO05D000092 2.9e-14 82.4 60 63.3
MELO3C026470.2 Cucumis melo HOM05D000154 ORTHO05D000092 1.4e-13 80.1 60 63.3
CiPaw.06G074100 Carya illinoinensis HOM05D000154 ORTHO05D000092 3.2e-13 79.0 60 61.7
MSTRG.7886 Avicennia marina HOM05D000154 ORTHO05D000092 5.4e-13 78.2 60 61.7
Glyma.08G288400 Glycine max HOM05D000154 ORTHO05D000092 5.4e-13 78.2 61 65.6
DCAR_007095 Daucus carota HOM05D000154 ORTHO05D000092 7.1e-13 77.8 62 64.5
CAN.G60.12 Capsicum annuum HOM05D000154 ORTHO05D000092 9.2e-13 77.4 60 61.7
Prupe.1G256000 Prunus persica HOM05D000154 ORTHO05D000092 9.2e-13 77.4 60 63.3
Nn3g16921 Nelumbo nucifera HOM05D000154 ORTHO05D000092 2.7e-12 75.9 60 65.0
Oeu001745.1 Olea europaea HOM05D000154 ORTHO05D000092 2.7e-12 75.9 61 63.9
ATR1149G137 Amborella trichopoda HOM05D000154 ORTHO05D000092 4.6e-12 75.1 60 58.3
unitig_27.g25197 Utricularia gibba HOM05D000154 ORTHO05D000092 6.0e-12 74.7 60 63.3
Nitab4.5_0000034g0240 Nicotiana tabacum HOM05D000154 ORTHO05D000092 1.7e-11 73.2 61 63.9
Rhsim13G0121700 Rhododendron simsii HOM05D003220 ORTHO05D003944 1.7e-11 73.2 68 61.8
arahy.Tifrunner.gnm1.ann1.43ZW0S Arachis hypogaea HOM05D000154 ORTHO05D000092 2.3e-11 72.8 65 60.0
arahy.Tifrunner.gnm1.ann1.GBJ0AR Arachis hypogaea HOM05D000154 ORTHO05D000092 2.3e-11 72.8 65 60.0
EL10Ac6g13652 Beta vulgaris HOM05D000154 ORTHO05D000092 3.0e-11 72.4 65 58.5
Ciclev10030704m.g Citrus clementina HOM05D000154 ORTHO05D000092 3.0e-11 72.4 60 63.3
Nitab4.5_0005509g0010 Nicotiana tabacum HOM05D000154 ORTHO05D000092 3.0e-11 72.4 61 62.3
Sc14g0008590 Simmondsia chinensis HOM05D000154 ORTHO05D000092 3.0e-11 72.4 61 60.7
Lj4g0005927 Lotus japonicus HOM05D000154 ORTHO05D000092 3.9e-11 72.0 60 61.7
MD16G1090100 Malus domestica HOM05D000154 ORTHO05D000092 3.9e-11 72.0 65 61.5
PSO832G0790 Papaver somniferum HOM05D000154 ORTHO05D000092 3.9e-11 72.0 60 61.7
Solyc04g025990.3 Solanum lycopersicum HOM05D000154 ORTHO05D000092 5.1e-11 71.6 62 61.3
Sopen04g013700 Solanum pennellii HOM05D000154 ORTHO05D000092 5.1e-11 71.6 62 61.3
ECA246G4275 Erigeron canadensis HOM05D000154 ORTHO05D000092 6.6e-11 71.2 60 61.7
VMungo0251G3452 Vigna mungo HOM05D000154 ORTHO05D000092 8.6e-11 70.9 63 58.7
AL2G16490 Arabidopsis lyrata HOM05D000154 ORTHO05D000092 1.1e-10 70.5 60 60.0
AT1G60160 Arabidopsis thaliana HOM05D000154 ORTHO05D000092 1.1e-10 70.5 60 60.0
Aa31LG2G10140 Aethionema arabicum HOM05D000154 ORTHO05D000092 1.5e-10 70.1 61 59.0
TPR.G29248 Trifolium pratense HOM05D000154 ORTHO05D000092 1.5e-10 70.1 63 63.5
MD13G1089800 Malus domestica HOM05D000154 ORTHO05D000092 1.9e-10 69.7 64 62.5
PSO063G5189 Papaver somniferum HOM05D000154 ORTHO05D000092 1.9e-10 69.7 60 60.0
RcHm_v2.0_Chr4g0444121 Rosa chinensis HOM05D000154 ORTHO05D000092 1.9e-10 69.7 60 61.7
PGSC0003DMG400013821 Solanum tuberosum HOM05D000154 ORTHO05D000092 1.9e-10 69.7 62 61.3
Atru.chr11.2001 Acer truncatum HOM05D000154 ORTHO05D000092 2.5e-10 69.3 60 56.7
Carub.0002s0509 Capsella rubella HOM05D000154 ORTHO05D000092 2.5e-10 69.3 60 58.3
Psat4g124800 Pisum sativum HOM05D000154 ORTHO05D000092 2.5e-10 69.3 62 61.3
Aqoxy3G03032 Aquilegia oxysepala HOM05D000154 ORTHO05D000092 4.3e-10 68.6 67 58.2
Peaxi162Scf00806g00011 Petunia axillaris HOM05D000154 ORTHO05D000092 5.6e-10 68.2 62 59.7
SEGI_09394 Sequoiadendron giganteum HOM05D000154 ORTHO05D000092 5.6e-10 68.2 63 55.6
CARHR052770 Cardamine hirsuta HOM05D000154 ORTHO05D000092 2.1e-09 66.2 60 55.0
AUR62014007 Chenopodium quinoa HOM05D000154 ORTHO05D000092 2.1e-09 66.2 65 53.8
Medtr8g063840 Medicago truncatula HOM05D000154 ORTHO05D000092 2.1e-09 66.2 61 62.3
Phvul.003G052800 Phaseolus vulgaris HOM05D000154 ORTHO05D000092 2.1e-09 66.2 63 57.1
Ah.02g129850 Amaranthus hybridus HOM05D000154 ORTHO05D000092 2.8e-09 65.9 66 53.0
Lalb_Chr09g0326401 Lupinus albus HOM05D000154 ORTHO05D000092 4.7e-09 65.1 60 56.7
THA.LOC104816750 Tarenaya hassleriana HOM05D000154 ORTHO05D000092 6.2e-09 64.7 61 59.0
Hund05978 Selenicereus undatus HOM05D000154 ORTHO05D000092 8.1e-09 64.3 63 57.1
Thhalv10023273m.g Eutrema salsugineum HOM05D000154 ORTHO05D000092 1.1e-08 63.9 61 57.4
Nn4g22829 Nelumbo nucifera HOM05D000154 ORTHO05D000092 1.8e-08 63.2 58 48.3
PGR119G0301 Punica granatum HOM05D000154 ORTHO05D000092 1.8e-08 63.2 70 51.4
Zm00001eb311560 Zea mays HOM05D000154 ORTHO05D000092 1.8e-08 63.2 75 48.0
Ca_22746_v3 Cicer arietinum L. HOM05D000154 ORTHO05D000092 2.4e-08 62.8 67 53.7
Lalb_Chr16g0382331 Lupinus albus HOM05D000154 ORTHO05D000092 2.4e-08 62.8 60 58.3
Lalb_Chr09g0335041 Lupinus albus HOM05D000154 ORTHO05D000092 4.0e-08 62.0 61 57.4
FvH4_4g34780 Fragaria vesca HOM05D000154 ORTHO05D000092 6.8e-08 61.2 63 54.0
FAN17G1515 Fragaria x ananassa HOM05D000154 ORTHO05D000092 2.0e-07 59.7 62 54.8
BcaB04g20252 Brassica carinata HOM05D000154 ORTHO05D000092 4.4e-07 58.5 60 51.7
Sp2g04500 Schrenkiella parvula HOM05D000154 ORTHO05D000092 4.4e-07 58.5 60 51.7
BcaC09g49423 Brassica carinata HOM05D000154 ORTHO05D000092 9.9e-07 57.4 60 51.7
A01p29110 Brassica napus HOM05D000154 ORTHO05D000092 9.9e-07 57.4 60 51.7
C01p36850 Brassica napus HOM05D000154 ORTHO05D000092 9.9e-07 57.4 60 51.7
BolC1t03644H Brassica oleracea HOM05D000154 ORTHO05D000092 9.9e-07 57.4 60 51.7
BraA01t02984Z Brassica rapa HOM05D000154 ORTHO05D000092 9.9e-07 57.4 60 51.7
arahy.Tifrunner.gnm1.ann1.IMK8G3 Arachis hypogaea HOM05D000154 ORTHO05D000092 2.2e-06 56.2 61 52.5
Peaxi162Scf01070g00016 Petunia axillaris HOM05D000154 ORTHO05D000092 8.4e-06 54.3 61 52.5


User provided reference genes

Program Settings