Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08789 Vaccinium macrocarpon HOM05D000751 ORTHO05D005618 0.0e+00 2054.6 1046 100.0
Actinidia06357 Actinidia chinensis HOM05D000751 ORTHO05D005618 8.1e-290 1000.7 1056 55.8
CSS0048015 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D005618 9.9e-288 993.8 1063 55.4
Rhsim01G0197100 Rhododendron simsii HOM05D000751 ORTHO05D005618 3.3e-259 899.0 1068 53.1
TAR636G3589 Trochodendron aralioides HOM05D000751 ORTHO05D005618 9.4e-254 880.9 1051 50.9
Hma1.2p1_0207F.1_g087810 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 4.7e-253 878.6 1061 51.5
GSVIVG01010908001 Vitis vinifera HOM05D000751 ORTHO05D005618 2.6e-251 872.8 995 51.4
Ciclev10030781m.g Citrus clementina HOM05D000751 ORTHO05D005618 7.7e-224 781.6 994 47.4
Aqoxy2G02196 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 8.0e-221 771.5 1071 45.8
Lsat_1_v5_gn_7_56501 Lactuca sativa HOM05D000751 ORTHO05D005618 8.9e-220 768.1 1054 45.7
CiPaw.14G110300 Carya illinoinensis HOM05D000751 ORTHO05D005618 8.3e-218 761.5 1052 46.3
Eucgr.A01411 Eucalyptus grandis HOM05D000751 ORTHO05D005618 1.6e-216 757.3 1056 45.0
Cc06_g22130 Coffea canephora HOM05D000751 ORTHO05D005618 2.0e-216 756.9 976 48.1
Nitab4.5_0000074g0030 Nicotiana tabacum HOM05D000751 ORTHO05D005618 1.5e-214 750.7 1066 45.9
ECA240G3678 Erigeron canadensis HOM05D000751 ORTHO05D005618 2.5e-214 750.0 1071 45.1
Cfa016755 Carpinus fangiana HOM05D000751 ORTHO05D005618 8.0e-213 745.0 1006 46.2
TWI38G2172 Tripterygium wilfordii HOM05D000751 ORTHO05D005618 1.9e-209 733.8 1071 44.6
Thecc.09G180200 Theobroma cacao HOM05D000751 ORTHO05D005618 2.4e-209 733.4 1050 46.3
Duzib168G1036 Durio zibethinus HOM05D000751 ORTHO05D005618 2.7e-208 729.9 1059 46.4
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 4.6e-208 729.2 994 46.9
Prupe.1G079600 Prunus persica HOM05D000751 ORTHO05D005618 1.1e-206 724.5 1066 43.4
Nn8g40996 Nelumbo nucifera HOM05D000751 ORTHO05D005618 2.6e-203 713.4 1013 44.3
Hund24686 Selenicereus undatus HOM05D000751 ORTHO05D005618 5.8e-203 712.2 1017 43.3
Atru.chr11.2504 Acer truncatum HOM05D000751 ORTHO05D005618 9.8e-203 711.4 1049 43.1
Manes.17G002500 Manihot esculenta HOM05D000751 ORTHO05D005618 3.2e-201 706.4 993 43.8
MSTRG.26530 Avicennia marina HOM05D000751 ORTHO05D005618 2.7e-200 703.4 1045 42.7
Gorai.009G003500 Gossypium raimondii HOM05D000751 ORTHO05D005618 2.7e-200 703.4 906 46.7
Cpa.g.sc86.27 Carica papaya HOM05D000751 ORTHO05D005618 3.5e-200 703.0 931 45.3
MELO3C017440.2 Cucumis melo HOM05D000751 ORTHO05D005618 1.0e-199 701.4 958 44.5
CsaV3_1G031770 Cucumis sativus L. HOM05D000751 ORTHO05D005618 3.0e-199 699.9 1001 43.7
Gohir.D05G003900 Gossypium hirsutum HOM05D000751 ORTHO05D005618 8.6e-199 698.4 906 46.9
Peaxi162Scf00324g00731 Petunia axillaris HOM05D000751 ORTHO05D005618 8.6e-199 698.4 1036 43.7
Sed0012322 Sechium edule HOM05D000751 ORTHO05D005618 1.2e-197 694.5 1000 43.5
ClCG06G013510 Citrullus lanatus HOM05D000751 ORTHO05D005618 4.7e-197 692.6 1033 44.4
EL10Ac2g02594 Beta vulgaris HOM05D000751 ORTHO05D005618 6.2e-197 692.2 986 43.6
RcHm_v2.0_Chr4g0400251 Rosa chinensis HOM05D000751 ORTHO05D005618 8.1e-197 691.8 1004 43.3
Nitab4.5_0008918g0010 Nicotiana tabacum HOM05D000751 ORTHO05D005618 2.3e-196 690.3 1064 43.6
DCAR_007397 Daucus carota HOM05D000751 ORTHO05D005618 8.9e-196 688.3 1050 43.5
Gohir.A05G003500 Gossypium hirsutum HOM05D000751 ORTHO05D005618 8.9e-196 688.3 906 46.0
PSO478G0715 Papaver somniferum HOM05D000751 ORTHO05D005618 8.9e-196 688.3 1049 41.9
THA.LOC104813512 Tarenaya hassleriana HOM05D000751 ORTHO05D005618 3.7e-194 682.9 1042 41.9
Sc06g0007900 Simmondsia chinensis HOM05D000751 ORTHO05D005618 3.2e-193 679.9 837 46.8
Carub.0001s1742 Capsella rubella HOM05D000751 ORTHO05D005618 4.1e-193 679.5 1056 41.3
CANSAT11G2085 Cannabis sativa HOM05D000751 ORTHO05D005618 5.4e-193 679.1 1054 42.2
EL10As14g24084 Beta vulgaris HOM05D000751 ORTHO05D005618 7.1e-193 678.7 1041 42.0
Migut.L01901 Erythranthe guttata HOM05D000751 ORTHO05D005618 1.3e-191 674.5 884 44.2
FvH4_4g07640 Fragaria vesca HOM05D000751 ORTHO05D005618 4.3e-190 669.5 1064 41.4
Aa31LG7G2520 Aethionema arabicum HOM05D000751 ORTHO05D005618 7.3e-190 668.7 1015 41.3
A08p30790 Brassica napus HOM05D000751 ORTHO05D005618 1.1e-188 664.8 1051 40.7
Potri.003G010000 Populus trichocarpa HOM05D000751 ORTHO05D005618 1.8e-188 664.1 974 42.5
PSO017G1776 Papaver somniferum HOM05D000751 ORTHO05D005618 8.9e-188 661.8 1055 40.7
HanXRQChr03g0068331 Helianthus annuus HOM05D000751 ORTHO05D005618 1.2e-187 661.4 1028 42.1
AL1G30040 Arabidopsis lyrata HOM05D000751 ORTHO05D005618 2.2e-186 657.1 1047 40.4
AT1G17690 Arabidopsis thaliana HOM05D000751 ORTHO05D005618 2.2e-186 657.1 1051 40.5
Thhalv10006892m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 2.4e-185 653.7 1047 40.1
BolC8t49447H Brassica oleracea HOM05D000751 ORTHO05D005618 3.5e-184 649.8 1052 40.1
Glyma.09G057700 Glycine max HOM05D000751 ORTHO05D005618 6.0e-184 649.0 963 42.1
Phvul.009G238100 Phaseolus vulgaris HOM05D000751 ORTHO05D005618 7.8e-184 648.7 966 42.3
Lalb_Chr02g0148081 Lupinus albus HOM05D000751 ORTHO05D005618 3.0e-183 646.7 932 43.0
CARHR018290 Cardamine hirsuta HOM05D000751 ORTHO05D005618 3.3e-182 643.3 1047 40.0
C08p18130 Brassica napus HOM05D000751 ORTHO05D005618 4.3e-182 642.9 1050 39.5
VMungo1309G0231 Vigna mungo HOM05D000751 ORTHO05D005618 1.6e-181 641.0 979 41.3
Cc06_g21130 Coffea canephora HOM05D000751 ORTHO05D005618 2.1e-181 640.6 832 47.7
BraA08t35010Z Brassica rapa HOM05D000751 ORTHO05D005618 7.6e-179 632.1 1046 39.6
FAN07G1720 Fragaria x ananassa HOM05D000751 ORTHO05D005618 4.9e-178 629.4 1126 39.3
Lj6g0015551 Lotus japonicus HOM05D000751 ORTHO05D005618 4.9e-178 629.4 932 42.2
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 4.2e-177 626.3 878 42.5
SGA_v2.0_scaffold595G53113 Striga asiatica HOM05D000751 ORTHO05D005618 5.4e-177 625.9 930 41.1
TPR.G9024 Trifolium pratense HOM05D000751 ORTHO05D005618 2.1e-173 614.0 932 41.4
Sopen07g005110 Solanum pennellii HOM05D000751 ORTHO05D005618 5.5e-169 599.4 999 41.0
Oeu047314.3 Olea europaea HOM05D000751 ORTHO05D005618 2.7e-168 597.0 955 41.7
SalBow1G4534 Salvia bowleyana HOM05D000751 ORTHO05D005618 3.5e-168 596.7 889 40.6
FAN17G2112 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.8e-167 594.3 1086 38.9
SalBow6G0847 Salvia bowleyana HOM05D000751 ORTHO05D005618 1.1e-166 591.7 908 40.1
ATR0626G151 Amborella trichopoda HOM05D000751 ORTHO05D005618 8.1e-165 585.5 1018 37.9
arahy.Tifrunner.gnm1.ann1.QPM7FK Arachis hypogaea HOM05D000751 ORTHO05D005618 2.0e-163 580.9 994 38.9
CDE06G1960 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 2.9e-162 577.0 994 39.3
Medtr2g036890 Medicago truncatula HOM05D000751 ORTHO05D005618 1.4e-161 574.7 978 39.2
Aqoxy2G02322 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.6e-160 571.2 961 40.3
Thhalv10023137m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 3.5e-160 570.1 985 37.8
FAN12G3496 Fragaria x ananassa HOM05D000751 ORTHO05D005618 2.8e-157 560.5 1064 37.7
Medtr2g012650 Medicago truncatula HOM05D000751 ORTHO05D005618 3.7e-157 560.1 1016 37.8
CDE02G3188 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 9.3e-153 545.4 440 63.4
unitig_8.g3549 Utricularia gibba HOM05D000751 ORTHO05D005618 1.3e-149 535.0 979 36.8
AUR62014975 Chenopodium quinoa HOM05D000751 ORTHO05D005618 2.4e-148 530.8 964 38.8
MD13G1251200 Malus domestica HOM05D000751 ORTHO05D005618 3.3e-142 510.4 435 61.1
SalBow6G2294 Salvia bowleyana HOM05D000751 ORTHO05D005618 2.8e-141 507.3 1111 35.2
arahy.Tifrunner.gnm1.ann1.4Y102Q Arachis hypogaea HOM05D000751 ORTHO05D005618 1.1e-140 505.4 897 37.9
Os05g0295100 Oryza sativa ssp. japonica HOM05D000751 ORTHO05D005618 3.8e-138 496.9 923 35.6
Carub.0003s1065 Capsella rubella HOM05D000751 ORTHO05D005618 8.5e-138 495.7 1005 35.6
Zm00001eb406370 Zea mays HOM05D000751 ORTHO05D005618 1.1e-134 485.3 963 33.9
DCAR_007396 Daucus carota HOM05D000751 ORTHO05D005618 5.3e-132 476.5 883 37.6
AagrBONN_evm.TU.Sc2ySwM_369.592 Anthoceros agrestis HOM05D000751 ORTHO05D005618 1.1e-129 468.8 1085 32.9
MD03G1036400 Malus domestica HOM05D000751 ORTHO05D005618 1.5e-129 468.4 871 37.7
Cc10_g11360 Coffea canephora HOM05D000751 ORTHO05D005618 6.1e-120 436.4 986 35.4
Mapoly0074s0025 Marchantia polymorpha HOM05D000751 ORTHO05D005618 1.4e-119 435.3 1089 31.0
CAN.G266.4 Capsicum annuum HOM05D000751 ORTHO05D005618 3.0e-119 434.1 364 61.3
SMO296G0020 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 1.3e-117 428.7 929 32.2
Pp3c10_17670 Physcomitrium patens HOM05D000751 ORTHO05D005618 1.8e-116 424.9 1046 32.1
SEGI_35111 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 1.2e-115 422.2 327 62.7
Aqoxy1G02673 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 2.8e-112 411.0 796 38.3
CBR_g38171 Chara braunii HOM05D000751 ORTHO05D005618 1.4e-103 382.1 481 42.2
Dinv26447 Davidia involucrata HOM05D000751 ORTHO05D005618 8.3e-101 372.9 683 40.1
Glyma.15G163800 Glycine max HOM05D000751 ORTHO05D005618 2.4e-100 371.3 685 36.5
SalBow6G6994 Salvia bowleyana HOM05D000751 ORTHO05D005618 6.2e-96 356.7 1010 30.9
HPP92_028564 Vanilla planifolia HOM05D000751 ORTHO05D005618 2.9e-93 347.8 334 55.4
CAN.G193.38 Capsicum annuum HOM05D000751 ORTHO05D005618 4.1e-92 344.0 592 38.9
AUR62030665 Chenopodium quinoa HOM05D000751 ORTHO05D005618 1.6e-88 332.0 582 37.1
Cre04.g218300 Chlamydomonas reinhardtii HOM05D000751 ORTHO05D005618 1.1e-87 329.3 479 38.0
SMO174G0270 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 7.3e-81 306.6 456 38.4
Hma1.2p1_0909F.1_g235820 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 6.2e-80 303.5 758 35.0
MCO16G456 Micromonas commoda HOM05D000751 ORTHO05D005618 1.3e-77 295.8 489 36.4
BolC2t08163H Brassica oleracea HOM05D000751 ORTHO05D005618 1.0e-74 286.2 365 44.9
Cc06_g21120 Coffea canephora HOM05D000751 ORTHO05D005618 3.2e-68 264.6 156 82.1
HPP92_003076 Vanilla planifolia HOM05D000751 ORTHO05D005618 1.6e-67 262.3 172 72.7
Nn2g10858 Nelumbo nucifera HOM05D000751 ORTHO05D005618 9.9e-62 243.0 188 64.4
Cfa022413 Carpinus fangiana HOM05D000751 ORTHO05D005618 3.8e-61 241.1 473 33.4
BcaB05g23995 Brassica carinata HOM05D000751 ORTHO05D005618 6.4e-61 240.4 812 26.5
SEGI_01124 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 2.3e-58 231.9 147 73.5
HPP92_028565 Vanilla planifolia HOM05D000751 ORTHO05D005618 3.3e-57 228.0 135 77.8
Medtr8g466490 Medicago truncatula HOM05D000751 ORTHO05D005618 1.3e-56 226.1 313 43.1
arahy.Tifrunner.gnm1.ann1.EK4LKE Arachis hypogaea HOM05D000751 ORTHO05D005618 2.8e-56 224.9 147 73.5
PRCOL_00003641 Prasinoderma coloniale HOM05D000751 ORTHO05D005618 2.0e-54 218.8 537 30.4
Psat4g182200 Pisum sativum HOM05D000751 ORTHO05D005618 7.6e-54 216.9 221 53.8
Solyc07g009350.4 Solanum lycopersicum HOM05D000751 ORTHO05D005618 1.7e-53 215.7 374 43.0
COL.COLO4_25458 Corchorus olitorius HOM05D000751 ORTHO05D005618 3.9e-50 204.5 764 29.3
AUR62024882 Chenopodium quinoa HOM05D000751 ORTHO05D005618 1.3e-48 199.5 233 46.8
Ca_05496_v3 Cicer arietinum L. HOM05D000751 ORTHO05D005618 2.1e-48 198.7 233 49.8
MD13G1251100 Malus domestica HOM05D000751 ORTHO05D005618 2.3e-42 178.7 369 37.9
CAN.G266.3 Capsicum annuum HOM05D000751 ORTHO05D005618 3.0e-42 178.3 294 42.2
COL.COLO4_25459 Corchorus olitorius HOM05D000751 ORTHO05D005618 1.4e-36 159.5 118 69.5
Psat4g047120 Pisum sativum HOM05D000751 ORTHO05D005618 7.2e-36 157.1 168 53.6
BcaC03g14585 Brassica carinata HOM05D000751 ORTHO05D005618 2.3e-34 152.1 222 43.7
Hma1.2p1_2432F.1_g322050 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 5.1e-34 151.0 261 44.1
Aqoxy3G01439 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.1e-33 149.8 92 77.2
Nn2g10857 Nelumbo nucifera HOM05D000751 ORTHO05D005618 2.2e-32 145.6 84 81.0
Sc06g0007910 Simmondsia chinensis HOM05D000751 ORTHO05D005618 2.2e-32 145.6 269 41.6
Sabra15G0073700 Salix brachista HOM05D000810 ORTHO05D005618 1.3e-29 136.3 139 52.5
Medtr4g415340 Medicago truncatula HOM05D000751 ORTHO05D005618 2.2e-29 135.6 280 37.9
SEGI_01614 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 3.2e-28 131.7 107 57.9
Psat4g182280 Pisum sativum HOM05D000751 ORTHO05D005618 4.2e-28 131.3 83 71.1
CAN.G101.3 Capsicum annuum HOM05D000751 ORTHO05D005618 3.9e-26 124.8 105 64.8
Sopen07g005100 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-23 116.3 70 82.9
SEGI_01043 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 2.4e-23 115.5 153 44.4
Gorai.003G081200 Gossypium raimondii HOM05D000751 ORTHO05D005618 5.3e-23 114.4 70 77.1
Hma1.2p1_2432F.1_g322060 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.7e-21 109.4 85 67.1
Haze_19748 Corylus avellana HOM05D000751 ORTHO05D005618 1.4e-20 106.3 227 35.2
Medtr8g466500 Medicago truncatula HOM05D000751 ORTHO05D005618 9.7e-17 93.6 109 45.0
Aqoxy125s004 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 2.2e-16 92.4 120 45.8
Aqoxy2G02180 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 3.6e-11 75.1 55 70.9
Hma1.2p1_2432F.1_g322070 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 4.7e-11 74.7 110 42.7
Aqoxy1G02674 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 8.8e-10 70.5 97 42.3
Rhsim04G0168400 Rhododendron simsii HOM05D000018 ORTHO05D008577 1.5e-09 69.7 52 73.1
HPP92_003077 Vanilla planifolia HOM05D000751 ORTHO05D005618 2.2e-08 65.9 101 39.6
Rhsim03G0091700 Rhododendron simsii HOM05D000751 ORTHO05D340051 1.1e-07 63.5 104 36.5
MD13G1245100 Malus domestica HOM05D000751 ORTHO05D005618 2.7e-06 58.9 43 62.8


User provided reference genes

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