Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08774 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 4.4e-107 391.3 202 100.0
vmacro04358 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 3.0e-63 245.7 172 79.1
vmacro18891 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 6.6e-63 244.6 172 77.9
Rhsim08G0097500 Rhododendron simsii HOM05D005516 ORTHO05D006713 2.1e-56 223.0 164 79.3
Dinv13791 Davidia involucrata HOM05D005516 ORTHO05D006713 3.4e-51 205.7 169 69.2
Actinidia06205 Actinidia chinensis HOM05D005516 ORTHO05D006713 2.3e-47 193.0 165 66.7
Hma1.2p1_0526F.1_g172910 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 4.0e-44 182.2 122 73.8
Duzib106G1703 Durio zibethinus HOM05D005516 ORTHO05D006713 2.2e-42 176.4 124 69.4
CSS0039228 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 8.7e-39 164.5 92 87.0
Cfa017721 Carpinus fangiana HOM05D005516 ORTHO05D006713 1.5e-38 163.7 148 62.2
CANSAT78G1214 Cannabis sativa HOM05D005516 ORTHO05D006713 3.3e-38 162.5 122 65.6
PGSC0003DMG400028211 Solanum tuberosum HOM05D005516 ORTHO05D006713 4.3e-38 162.2 129 67.4
CSS0003853 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 5.6e-38 161.8 89 86.5
Gorai.013G196100 Gossypium raimondii HOM05D005516 ORTHO05D006713 9.6e-38 161.0 88 85.2
Sopen10g031880 Solanum pennellii HOM05D005516 ORTHO05D006713 9.6e-38 161.0 128 68.8
PSO339G3932 Papaver somniferum HOM05D005516 ORTHO05D006713 1.6e-37 160.2 146 60.3
arahy.Tifrunner.gnm1.ann1.BMR428 Arachis hypogaea HOM05D005516 ORTHO05D006713 2.1e-37 159.8 110 70.9
COL.COLO4_20092 Corchorus olitorius HOM05D005516 ORTHO05D006713 2.8e-37 159.5 111 70.3
CiPaw.09G166400 Carya illinoinensis HOM05D005516 ORTHO05D006713 3.6e-37 159.1 121 64.5
Ca_08316_v3 Cicer arietinum L. HOM05D005516 ORTHO05D006713 4.8e-37 158.7 110 71.8
CAN.G128.137 Capsicum annuum HOM05D005516 ORTHO05D006713 6.2e-37 158.3 109 70.6
PSO384G4582 Papaver somniferum HOM05D005516 ORTHO05D006713 6.2e-37 158.3 146 59.6
Hma1.2p1_0526F.1_g172920 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 1.4e-36 157.1 88 86.4
Lalb_Chr14g0364851 Lupinus albus HOM05D005516 ORTHO05D006713 5.3e-36 155.2 153 55.6
Solyc10g081380.2 Solanum lycopersicum HOM05D005516 ORTHO05D006713 6.9e-36 154.8 113 66.4
CSS0031486 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 2.0e-35 153.3 86 86.0
Glyma.16G035800 Glycine max HOM05D005516 ORTHO05D006713 2.0e-35 153.3 128 57.8
Thecc.05G241500 Theobroma cacao HOM05D005516 ORTHO05D006713 2.6e-35 152.9 113 68.1
GSVIVG01029962001 Vitis vinifera HOM05D005516 ORTHO05D006713 2.6e-35 152.9 144 59.7
Haze_20402 Corylus avellana HOM05D005516 ORTHO05D006713 3.4e-35 152.5 144 60.4
Oeu044207.1 Olea europaea HOM05D005516 ORTHO05D006713 3.4e-35 152.5 141 60.3
ClCG04G004680 Citrullus lanatus HOM05D005516 ORTHO05D006713 4.4e-35 152.1 86 83.7
Potri.019G040400 Populus trichocarpa HOM05D005516 ORTHO05D006713 1.3e-34 150.6 150 56.0
Duzib128G1828 Durio zibethinus HOM05D005516 ORTHO05D006713 1.7e-34 150.2 113 67.3
Manes.08G152800 Manihot esculenta HOM05D005516 ORTHO05D006713 1.7e-34 150.2 144 57.6
FAN19G1175 Fragaria x ananassa HOM05D005516 ORTHO05D006713 3.8e-34 149.1 112 65.2
Sabra13G0057700 Salix brachista HOM05D005516 ORTHO05D006713 4.9e-34 148.7 148 59.5
FAN26G2397 Fragaria x ananassa HOM05D005516 ORTHO05D006713 8.4e-34 147.9 111 65.8
Aa31LG11G11740 Aethionema arabicum HOM05D005516 ORTHO05D006713 1.1e-33 147.5 99 75.8
FAN23G0165 Fragaria x ananassa HOM05D005516 ORTHO05D006713 1.1e-33 147.5 111 64.9
MBI05_g16554_MAGBIO Magnolia biondii HOM05D005516 ORTHO05D006713 1.1e-33 147.5 114 64.0
Nitab4.5_0000613g0140 Nicotiana tabacum HOM05D005516 ORTHO05D006713 1.4e-33 147.1 106 68.9
FvH4_1g29880 Fragaria vesca HOM05D005516 ORTHO05D006713 1.9e-33 146.7 111 64.9
MSTRG.6254 Avicennia marina HOM05D005516 ORTHO05D006713 2.4e-33 146.4 101 70.3
THA.LOC104820795 Tarenaya hassleriana HOM05D005516 ORTHO05D006713 2.4e-33 146.4 86 80.2
Atru.chr2.1522 Acer truncatum HOM05D005516 ORTHO05D006713 3.2e-33 146.0 82 85.4
Actinidia07963 Actinidia chinensis HOM05D005516 ORTHO05D006713 3.2e-33 146.0 123 65.9
Phvul.001G105600 Phaseolus vulgaris HOM05D005516 ORTHO05D006713 3.2e-33 146.0 119 60.5
Duzib177G0157 Durio zibethinus HOM05D005516 ORTHO05D006713 4.2e-33 145.6 144 56.9
Psat3g086560 Pisum sativum HOM05D005516 ORTHO05D006713 4.2e-33 145.6 105 67.6
MELO3C008865.2 Cucumis melo HOM05D005516 ORTHO05D006713 7.1e-33 144.8 82 82.9
CsaV3_4G031610 Cucumis sativus L. HOM05D005516 ORTHO05D006713 7.1e-33 144.8 82 82.9
Potri.013G066000 Populus trichocarpa HOM05D005516 ORTHO05D006713 7.1e-33 144.8 144 56.9
Prupe.7G015800 Prunus persica HOM05D005516 ORTHO05D006713 7.1e-33 144.8 112 63.4
Hma1.2p1_0106F.1_g051205 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 9.3e-33 144.4 87 77.0
AL6G28930 Arabidopsis lyrata HOM05D005516 ORTHO05D006713 1.6e-32 143.7 115 61.7
Sed0005064 Sechium edule HOM05D005516 ORTHO05D006713 1.6e-32 143.7 92 76.1
CDE07G0498 Ceratophyllum demersum HOM05D005516 ORTHO05D006713 2.1e-32 143.3 109 66.1
DCAR_020653 Daucus carota HOM05D005516 ORTHO05D006713 2.1e-32 143.3 132 59.8
BcaB01g04919 Brassica carinata HOM05D005516 ORTHO05D006713 2.7e-32 142.9 160 54.4
Nitab4.5_0000811g0010 Nicotiana tabacum HOM05D005516 ORTHO05D006713 2.7e-32 142.9 104 68.3
RcHm_v2.0_Chr3g0496031 Rosa chinensis HOM05D005516 ORTHO05D006713 3.5e-32 142.5 149 57.0
Ciclev10022543m.g Citrus clementina HOM05D005516 ORTHO05D006713 4.6e-32 142.1 102 69.6
Eucgr.K01534 Eucalyptus grandis HOM05D005516 ORTHO05D006713 4.6e-32 142.1 149 55.0
Peaxi162Scf00575g00619 Petunia axillaris HOM05D005516 ORTHO05D006713 4.6e-32 142.1 106 66.0
Glyma.19G117300 Glycine max HOM05D005516 ORTHO05D006713 7.8e-32 141.4 142 52.8
MD12G1011900 Malus domestica HOM05D005516 ORTHO05D006713 7.8e-32 141.4 99 70.7
VMungo1383G1686 Vigna mungo HOM05D005516 ORTHO05D006713 1.0e-31 141.0 114 61.4
MD14G1009500 Malus domestica HOM05D005516 ORTHO05D006713 1.7e-31 140.2 99 67.7
QL07p017420 Quercus lobata HOM05D005516 ORTHO05D006713 1.7e-31 140.2 101 70.3
TPR.G34794 Trifolium pratense HOM05D005516 ORTHO05D006713 1.7e-31 140.2 82 80.5
Sc07g0007460 Simmondsia chinensis HOM05D005516 ORTHO05D006713 2.3e-31 139.8 115 61.7
TWI60G0181 Tripterygium wilfordii HOM05D005516 ORTHO05D006713 2.3e-31 139.8 142 55.6
Gorai.004G252300 Gossypium raimondii HOM05D005516 ORTHO05D006713 6.6e-31 138.3 106 65.1
TWI32G0326 Tripterygium wilfordii HOM05D005516 ORTHO05D006713 8.7e-31 137.9 144 55.6
DCAR_016961 Daucus carota HOM05D005516 ORTHO05D006713 1.9e-30 136.7 84 72.6
Sp6g26410 Schrenkiella parvula HOM05D005516 ORTHO05D006713 3.3e-30 136.0 98 68.4
Cc06_g21500 Coffea canephora HOM05D005516 ORTHO05D006713 4.3e-30 135.6 81 76.5
Gohir.A08G219566 Gossypium hirsutum HOM05D005516 ORTHO05D006713 5.6e-30 135.2 105 64.8
Lj1g0004780 Lotus japonicus HOM05D005516 ORTHO05D006713 7.3e-30 134.8 96 69.8
Hund20711 Selenicereus undatus HOM05D005516 ORTHO05D006713 7.3e-30 134.8 75 82.7
HPP92_000977 Vanilla planifolia HOM05D005516 ORTHO05D006713 7.3e-30 134.8 114 57.9
Zm00001eb052720 Zea mays HOM05D005516 ORTHO05D006713 9.6e-30 134.4 114 57.9
CARHR195330 Cardamine hirsuta HOM05D005516 ORTHO05D006713 1.6e-29 133.7 88 72.7
ECA248G2342 Erigeron canadensis HOM05D005516 ORTHO05D006713 1.6e-29 133.7 101 65.3
HPP92_001001 Vanilla planifolia HOM05D005516 ORTHO05D006713 1.6e-29 133.7 114 57.0
arahy.Tifrunner.gnm1.ann1.253MNK Arachis hypogaea HOM05D005516 ORTHO05D006713 6.2e-29 131.7 100 67.0
MSTRG.26204 Avicennia marina HOM05D005516 ORTHO05D006713 6.2e-29 131.7 116 60.3
Medtr7g086700 Medicago truncatula HOM05D005516 ORTHO05D006713 6.2e-29 131.7 74 85.1
Gohir.A13G161100 Gossypium hirsutum HOM05D005516 ORTHO05D006713 8.1e-29 131.3 114 60.5
Lsat_1_v5_gn_5_154420 Lactuca sativa HOM05D005516 ORTHO05D006713 8.1e-29 131.3 99 66.7
C02p25840 Brassica napus HOM05D005516 ORTHO05D006713 2.4e-28 129.8 90 71.1
Thhalv10014907m.g Eutrema salsugineum HOM05D005516 ORTHO05D006713 2.4e-28 129.8 86 73.3
AT5G17840 Arabidopsis thaliana HOM05D005516 ORTHO05D006713 3.1e-28 129.4 86 73.3
HanXRQChr13g0406451 Helianthus annuus HOM05D005516 ORTHO05D006713 4.0e-28 129.0 144 51.4
SGA_v2.0_scaffold69G23215 Striga asiatica HOM05D000039 ORTHO05D000370 4.0e-28 129.0 91 69.2
SGA_v2.0_scaffold66G22373 Striga asiatica HOM05D005516 ORTHO05D006713 6.9e-28 128.3 103 63.1
Nitab4.5_0000404g0040 Nicotiana tabacum HOM05D005516 ORTHO05D006713 9.0e-28 127.9 82 74.4
Hund20712 Selenicereus undatus HOM05D005516 ORTHO05D006713 1.2e-27 127.5 74 81.1
Carub.0006s1607 Capsella rubella HOM05D005516 ORTHO05D006713 2.0e-27 126.7 78 74.4
BcaB05g23282 Brassica carinata HOM05D005516 ORTHO05D006713 4.5e-27 125.6 108 62.0
Gohir.D13G166400 Gossypium hirsutum HOM05D005516 ORTHO05D006713 4.5e-27 125.6 114 57.9
Cpa.g.sc161.38 Carica papaya HOM05D005516 ORTHO05D006713 1.3e-26 124.0 79 74.7
A03p08520 Brassica napus HOM05D005516 ORTHO05D006713 2.9e-26 122.9 121 54.5
BcaB01g05159 Brassica carinata HOM05D005516 ORTHO05D006713 3.8e-26 122.5 117 53.8
C03p09930 Brassica napus HOM05D005516 ORTHO05D006713 3.8e-26 122.5 117 53.8
BolC3t13481H Brassica oleracea HOM05D005516 ORTHO05D006713 3.8e-26 122.5 117 53.8
BraA03t10176Z Brassica rapa HOM05D005516 ORTHO05D006713 3.8e-26 122.5 117 53.8
Pp3c8_890 Physcomitrium patens HOM05D005516 ORTHO05D006713 1.4e-25 120.6 79 72.2
Ah.13g074870 Amaranthus hybridus HOM05D005516 ORTHO05D006713 2.4e-25 119.8 85 69.4
Os03g0656201 Oryza sativa ssp. japonica HOM05D005516 ORTHO05D006713 4.2e-25 119.0 78 70.5
AUR62018088 Chenopodium quinoa HOM05D005516 ORTHO05D006713 7.1e-25 118.2 83 68.7
EL10Ac3g06621 Beta vulgaris HOM05D005516 ORTHO05D006713 1.6e-24 117.1 80 73.8
Zm00001eb218270 Zea mays HOM05D005516 ORTHO05D006713 2.1e-24 116.7 81 65.4
AUR62032011 Chenopodium quinoa HOM05D005516 ORTHO05D006713 2.7e-24 116.3 74 71.6
SEGI_32239 Sequoiadendron giganteum HOM05D005516 ORTHO05D006713 2.7e-24 116.3 139 48.2
unitig_0.g583 Utricularia gibba HOM05D005516 ORTHO05D006713 3.5e-24 115.9 79 73.4
Lalb_Chr24g0401101 Lupinus albus HOM05D005516 ORTHO05D006713 9.6e-22 107.8 105 57.1
Aqoxy1G00508 Aquilegia oxysepala HOM05D005516 ORTHO05D006713 4.8e-21 105.5 73 72.6
Sed0000674 Sechium edule HOM05D005516 ORTHO05D006713 1.1e-20 104.4 87 62.1
Peaxi162Scf00575g00620 Petunia axillaris HOM05D005516 ORTHO05D006713 1.8e-20 103.6 133 45.9
Gohir.D02G044500 Gossypium hirsutum HOM05D005516 ORTHO05D006713 1.5e-19 100.5 66 66.7
Mapoly0020s0169 Marchantia polymorpha HOM05D005516 ORTHO05D006713 4.9e-18 95.5 84 54.8
Oeu029775.1 Olea europaea HOM05D005516 ORTHO05D006713 7.1e-17 91.7 84 59.5
SalBow6G3354 Salvia bowleyana HOM05D005516 ORTHO05D006713 1.6e-16 90.5 56 75.0
TAR633G1766 Trochodendron aralioides HOM05D005516 ORTHO05D006713 2.1e-16 90.1 114 49.1
Ciclev10013836m.g Citrus clementina HOM05D005516 ORTHO05D006713 7.9e-16 88.2 58 67.2
Gohir.A06G040900 Gossypium hirsutum HOM05D005516 ORTHO05D006713 1.1e-14 84.3 59 64.4
Gohir.D05G109301 Gossypium hirsutum HOM05D005516 ORTHO05D006713 1.1e-14 84.3 59 64.4
BcaC03g15036 Brassica carinata HOM05D005516 ORTHO05D006713 5.7e-14 82.0 63 65.1
BolC2t08658H Brassica oleracea HOM05D005516 ORTHO05D006713 5.7e-14 82.0 63 65.1
CBR_g28089 Chara braunii HOM05D005516 ORTHO05D006713 1.3e-13 80.9 52 67.3
Nn6g32378 Nelumbo nucifera HOM05D005516 ORTHO05D006713 3.4e-11 72.8 91 42.9
SMO367G1142 Selaginella moellendorffii HOM05D005516 ORTHO05D006713 1.1e-09 67.8 51 60.8


User provided reference genes

Program Settings