Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08765 Vaccinium macrocarpon HOM05D006473 ORTHO05D008108 2.2e-83 312.4 173 100.0
Rhsim12G0015400 Rhododendron simsii HOM05D006473 ORTHO05D008108 4.3e-39 165.2 144 67.4
CSS0026100 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 8.8e-24 114.4 177 45.2
CSS0046570 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 8.8e-24 114.4 177 45.2
Actinidia12507 Actinidia chinensis HOM05D006473 ORTHO05D008108 9.7e-23 110.9 176 43.2
Peaxi162Scf00393g01011 Petunia axillaris HOM05D006473 ORTHO05D008108 2.8e-22 109.4 158 44.3
MELO3C026363.2 Cucumis melo HOM05D006473 ORTHO05D008108 4.1e-21 105.5 163 42.9
Sed0014549 Sechium edule HOM05D006473 ORTHO05D008108 4.1e-21 105.5 175 42.9
CAN.G529.20 Capsicum annuum HOM05D006473 ORTHO05D008108 5.3e-21 105.1 155 44.5
ClCG11G016910 Citrullus lanatus HOM05D006473 ORTHO05D008108 5.3e-21 105.1 166 45.2
CsaV3_4G032520 Cucumis sativus L. HOM05D006473 ORTHO05D008108 9.1e-21 104.4 168 43.5
Sed0027280 Sechium edule HOM05D006473 ORTHO05D008108 9.1e-21 104.4 164 42.7
Actinidia32074 Actinidia chinensis HOM05D006473 ORTHO05D008108 5.0e-19 98.6 189 38.1
MD09G1143500 Malus domestica HOM05D006473 ORTHO05D008108 1.5e-18 97.1 159 45.3
Nitab4.5_0002292g0030 Nicotiana tabacum HOM05D006473 ORTHO05D008108 2.5e-18 96.3 158 41.1
Solyc07g043070.3 Solanum lycopersicum HOM05D006473 ORTHO05D008108 4.2e-18 95.5 159 40.3
Sopen07g022630 Solanum pennellii HOM05D006473 ORTHO05D008108 4.2e-18 95.5 159 40.3
Thecc.01G174700 Theobroma cacao HOM05D006473 ORTHO05D008108 5.5e-18 95.1 158 43.7
Peaxi162Scf00322g00416 Petunia axillaris HOM05D006473 ORTHO05D008108 7.2e-18 94.7 180 38.3
Cc00_g04870 Coffea canephora HOM05D006473 ORTHO05D008108 1.6e-17 93.6 159 38.4
FAN05G1961 Fragaria x ananassa HOM05D006473 ORTHO05D008108 3.6e-17 92.4 175 41.7
RcHm_v2.0_Chr2g0153221 Rosa chinensis HOM05D006473 ORTHO05D008108 4.7e-17 92.0 175 41.1
Nitab4.5_0011512g0010 Nicotiana tabacum HOM05D006473 ORTHO05D008108 6.1e-17 91.7 164 37.8
CiPaw.04G072200 Carya illinoinensis HOM05D006473 ORTHO05D008108 8.0e-17 91.3 162 42.6
CiPaw.03G109100 Carya illinoinensis HOM05D006473 ORTHO05D008108 1.0e-16 90.9 155 40.0
PGSC0003DMG400013558 Solanum tuberosum HOM05D006473 ORTHO05D008108 1.0e-16 90.9 159 39.6
Haze_13544 Corylus avellana HOM05D006473 ORTHO05D008108 1.4e-16 90.5 166 40.4
Cfa023365 Carpinus fangiana HOM05D006473 ORTHO05D008108 2.3e-16 89.7 166 39.2
Prupe.3G184300 Prunus persica HOM05D006473 ORTHO05D008108 2.3e-16 89.7 158 42.4
TAR626G1390 Trochodendron aralioides HOM05D006473 ORTHO05D008108 2.3e-16 89.7 151 42.4
Nn7g38339 Nelumbo nucifera HOM05D006473 ORTHO05D008108 3.0e-16 89.4 157 41.4
COL.COLO4_19989 Corchorus olitorius HOM05D006473 ORTHO05D008108 6.8e-16 88.2 161 40.4
Lj6g0005292 Lotus japonicus HOM05D006473 ORTHO05D008108 8.8e-16 87.8 157 43.9
PGR031G0759 Punica granatum HOM05D006473 ORTHO05D008108 8.8e-16 87.8 156 41.0
TAR626G1015 Trochodendron aralioides HOM05D006473 ORTHO05D008108 8.8e-16 87.8 152 42.8
Duzib138G0874 Durio zibethinus HOM05D006473 ORTHO05D008108 1.2e-15 87.4 166 39.2
FvH4_6g39300 Fragaria vesca HOM05D006473 ORTHO05D008108 1.2e-15 87.4 175 42.3
Gorai.007G172600 Gossypium raimondii HOM05D006473 ORTHO05D008108 1.5e-15 87.0 176 37.5
Gohir.D11G162300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 2.0e-15 86.7 176 37.5
MD17G1129800 Malus domestica HOM05D006473 ORTHO05D008108 2.6e-15 86.3 164 42.7
VMungo0540G0033 Vigna mungo HOM05D006473 ORTHO05D008108 3.4e-15 85.9 153 39.9
Ciclev10012907m.g Citrus clementina HOM05D006473 ORTHO05D008108 5.7e-15 85.1 171 39.2
Migut.H01260 Erythranthe guttata HOM05D006473 ORTHO05D008108 5.7e-15 85.1 164 37.2
Phvul.007G120134 Phaseolus vulgaris HOM05D006473 ORTHO05D008108 5.7e-15 85.1 153 41.2
Sabra06G0006200 Salix brachista HOM05D006473 ORTHO05D008108 7.5e-15 84.7 173 37.6
Aqoxy5G02466 Aquilegia oxysepala HOM05D006473 ORTHO05D008108 9.8e-15 84.3 153 36.6
BcaC07g37876 Brassica carinata HOM05D006473 ORTHO05D008108 9.8e-15 84.3 162 39.5
A08p11670 Brassica napus HOM05D006473 ORTHO05D008108 9.8e-15 84.3 162 39.5
BolC8t48269H Brassica oleracea HOM05D006473 ORTHO05D008108 9.8e-15 84.3 162 39.5
BraA08t33161Z Brassica rapa HOM05D006473 ORTHO05D008108 9.8e-15 84.3 162 39.5
Gohir.A11G155300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 9.8e-15 84.3 177 37.3
EL10Ac6g15336 Beta vulgaris HOM05D006473 ORTHO05D008108 1.3e-14 84.0 145 36.6
CANSAT64G1482 Cannabis sativa HOM05D006473 ORTHO05D008108 2.2e-14 83.2 159 42.8
FAN09G0937 Fragaria x ananassa HOM05D006473 ORTHO05D008108 2.8e-14 82.8 184 39.1
FAN14G2613 Fragaria x ananassa HOM05D006473 ORTHO05D008108 2.8e-14 82.8 184 39.1
Glyma.13G004200 Glycine max HOM05D006473 ORTHO05D008108 2.8e-14 82.8 156 39.1
TWI34G1686 Tripterygium wilfordii HOM05D006473 ORTHO05D008108 2.8e-14 82.8 166 39.2
COL.COLO4_18222 Corchorus olitorius HOM05D006473 ORTHO05D008108 4.8e-14 82.0 163 38.7
Manes.08G068100 Manihot esculenta HOM05D006473 ORTHO05D008108 1.1e-13 80.9 167 38.3
Potri.006G008000 Populus trichocarpa HOM05D006473 ORTHO05D008108 1.1e-13 80.9 156 39.7
Sp7g13370 Schrenkiella parvula HOM05D006473 ORTHO05D008108 1.8e-13 80.1 157 39.5
TPR.G17559 Trifolium pratense HOM05D006473 ORTHO05D008108 2.4e-13 79.7 156 39.1
BcaB04g18284 Brassica carinata HOM05D006473 ORTHO05D008108 4.1e-13 79.0 164 39.0
PSO675G8005 Papaver somniferum HOM05D006473 ORTHO05D008108 4.1e-13 79.0 173 35.8
Nitab4.5_0000170g0320 Nicotiana tabacum HOM05D006473 ORTHO05D008108 5.4e-13 78.6 134 39.6
Glyma.20G063000 Glycine max HOM05D006473 ORTHO05D008108 1.6e-12 77.0 155 36.8
AT4G15140 Arabidopsis thaliana HOM05D006473 ORTHO05D008108 2.0e-12 76.6 161 39.8
BraA05t20604Z Brassica rapa HOM05D006473 ORTHO05D008108 2.0e-12 76.6 164 37.2
BcaB02g07838 Brassica carinata HOM05D006473 ORTHO05D008108 2.7e-12 76.3 154 36.4
Sc07g0001930 Simmondsia chinensis HOM05D006473 ORTHO05D008108 4.5e-12 75.5 147 39.5
Lsat_1_v5_gn_1_29560 Lactuca sativa HOM05D006473 ORTHO05D008108 5.9e-12 75.1 174 34.5
CARHR221880 Cardamine hirsuta HOM05D006473 ORTHO05D008108 7.7e-12 74.7 160 37.5
A05p16970 Brassica napus HOM05D006473 ORTHO05D008108 1.0e-11 74.3 164 36.6
Psat5g106240 Pisum sativum HOM05D006473 ORTHO05D008108 1.0e-11 74.3 157 37.6
QL07p025679 Quercus lobata HOM05D006473 ORTHO05D008108 1.0e-11 74.3 176 36.9
ECA247G3587 Erigeron canadensis HOM05D006473 ORTHO05D008108 1.7e-11 73.6 179 34.6
Carub.0007s2685 Capsella rubella HOM05D006473 ORTHO05D008108 2.2e-11 73.2 161 38.5
MBI02_g01129_MAGBIO Magnolia biondii HOM05D006464 ORTHO05D007923 2.2e-11 73.2 135 37.8
CDE05G3197 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 2.9e-11 72.8 159 35.2
Haze_13545 Corylus avellana HOM05D006473 ORTHO05D008108 3.8e-11 72.4 134 38.1
Os04g0504200 Oryza sativa ssp. japonica HOM05D006473 ORTHO05D008108 3.8e-11 72.4 164 37.2
DCAR_029496 Daucus carota HOM05D006473 ORTHO05D008108 5.0e-11 72.0 184 34.8
Medtr3g082070 Medicago truncatula HOM05D006473 ORTHO05D008108 6.5e-11 71.6 164 36.0
QL10p019398 Quercus lobata HOM05D006473 ORTHO05D008108 6.5e-11 71.6 163 36.8
arahy.Tifrunner.gnm1.ann1.ITU10B Arachis hypogaea HOM05D006473 ORTHO05D008108 1.1e-10 70.9 152 33.6
Lalb_Chr17g0337141 Lupinus albus HOM05D006473 ORTHO05D008108 1.1e-10 70.9 156 35.9
Hund23023 Selenicereus undatus HOM05D006473 ORTHO05D008108 1.5e-10 70.5 157 35.0
Cpa.g.sc8.265 Carica papaya HOM05D006473 ORTHO05D008108 2.5e-10 69.7 177 34.5
GSVIVG01015888001 Vitis vinifera HOM05D006473 ORTHO05D008108 2.5e-10 69.7 146 40.4
AL7G40560 Arabidopsis lyrata HOM05D006473 ORTHO05D008108 3.2e-10 69.3 161 35.4
arahy.Tifrunner.gnm1.ann1.UN21ID Arachis hypogaea HOM05D006473 ORTHO05D008108 3.2e-10 69.3 151 33.1
Eucgr.A00949 Eucalyptus grandis HOM05D006473 ORTHO05D008108 3.2e-10 69.3 151 35.1
C06p16570 Brassica napus HOM05D006473 ORTHO05D008108 5.5e-10 68.6 163 35.0
BolC6t36859H Brassica oleracea HOM05D006473 ORTHO05D008108 5.5e-10 68.6 163 35.0
QL04p064817 Quercus lobata HOM05D006473 ORTHO05D008108 5.5e-10 68.6 156 35.9
QL07p026949 Quercus lobata HOM05D006473 ORTHO05D008108 7.2e-10 68.2 167 35.9
BcaC08g44251 Brassica carinata HOM05D006473 ORTHO05D008108 9.4e-10 67.8 163 35.0
Thhalv10027487m.g Eutrema salsugineum HOM05D006473 ORTHO05D008108 2.1e-09 66.6 167 34.7
Atru.chr8.1011 Acer truncatum HOM05D006473 ORTHO05D008108 3.6e-09 65.9 148 36.5
QL07p027003 Quercus lobata HOM05D006473 ORTHO05D008108 6.1e-09 65.1 167 35.3
Zm00001eb078060 Zea mays HOM05D006473 ORTHO05D008108 8.0e-09 64.7 160 31.9
THA.LOC104808506 Tarenaya hassleriana HOM05D006473 ORTHO05D008108 1.0e-08 64.3 171 35.1
Aa31LG9G2250 Aethionema arabicum HOM05D006473 ORTHO05D008108 1.4e-08 63.9 158 34.2
CDE11G0296 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 3.0e-08 62.8 38 71.1
Oeu027256.1 Olea europaea HOM05D006473 ORTHO05D008108 3.0e-08 62.8 120 35.8
Sabra16G0000300 Salix brachista HOM05D006473 ORTHO05D008108 3.0e-08 62.8 159 35.2
QL09p045725 Quercus lobata HOM05D006473 ORTHO05D008108 6.8e-08 61.6 98 41.8
ATR0763G071 Amborella trichopoda HOM05D006473 ORTHO05D008108 1.2e-07 60.8 144 34.0
Ca_16320_v3 Cicer arietinum L. HOM05D006473 ORTHO05D008108 1.2e-07 60.8 146 34.2
Hund04387 Selenicereus undatus HOM05D006473 ORTHO05D008108 1.2e-07 60.8 163 27.6
QL07p026979 Quercus lobata HOM05D006473 ORTHO05D008108 2.0e-07 60.1 91 45.1
HanXRQChr02g0035171 Helianthus annuus HOM05D006473 ORTHO05D008108 2.6e-07 59.7 165 33.9
unitig_62.g23243 Utricularia gibba HOM05D006473 ORTHO05D008108 4.4e-07 58.9 159 30.8
HPP92_016064 Vanilla planifolia HOM05D006473 ORTHO05D008108 4.4e-07 58.9 142 30.3
QL04p064939 Quercus lobata HOM05D006473 ORTHO05D008108 9.8e-07 57.8 158 34.8
SGA_v2.0_scaffold49G18372 Striga asiatica HOM05D006473 ORTHO05D008108 8.3e-06 54.7 140 32.1


User provided reference genes

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