Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08762 Vaccinium macrocarpon HOM05D007889 ORTHO05D009987 1.3e-36 156.0 83 100.0
CSS0006316 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 1.2e-10 69.7 50 74.0
CSS0045661 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 1.2e-10 69.7 50 74.0
Cpa.g.sc55.18 Carica papaya HOM05D007889 ORTHO05D009987 1.6e-10 69.3 50 74.0
Manes.13G100900 Manihot esculenta HOM05D007889 ORTHO05D009987 1.6e-10 69.3 50 74.0
SalBow3G4637 Salvia bowleyana HOM05D007889 ORTHO05D009987 1.6e-10 69.3 50 70.0
TWI77G0910 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 2.0e-10 68.9 50 72.0
TWI74G1088 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 3.5e-10 68.2 50 72.0
Dinv36939 Davidia involucrata HOM05D007889 ORTHO05D009987 4.5e-10 67.8 50 74.0
THA.LOC109116914 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 4.5e-10 67.8 50 72.0
Atru.chr3.1237 Acer truncatum HOM05D007889 ORTHO05D009987 7.7e-10 67.0 50 72.0
Cc07_g14040 Coffea canephora HOM05D007889 ORTHO05D009987 1.0e-09 66.6 50 72.0
PGR102G1376 Punica granatum HOM05D007889 ORTHO05D009987 1.7e-09 65.9 49 73.5
Migut.K00803 Erythranthe guttata HOM05D007889 ORTHO05D009987 2.2e-09 65.5 50 68.0
MSTRG.15685 Avicennia marina HOM05D007889 ORTHO05D009987 2.9e-09 65.1 50 68.0
CANSAT01G1217 Cannabis sativa HOM05D007889 ORTHO05D009987 2.9e-09 65.1 50 70.0
Haze_03881 Corylus avellana HOM05D007889 ORTHO05D009987 2.9e-09 65.1 50 70.0
FAN26G2710 Fragaria x ananassa HOM05D007889 ORTHO05D009987 2.9e-09 65.1 76 50.0
FAN28G0932 Fragaria x ananassa HOM05D007889 ORTHO05D009987 2.9e-09 65.1 49 71.4
Actinidia25305 Actinidia chinensis HOM05D007889 ORTHO05D009987 3.8e-09 64.7 49 69.4
Manes.12G125800 Manihot esculenta HOM05D007889 ORTHO05D009987 3.8e-09 64.7 50 68.0
FAN23G2864 Fragaria x ananassa HOM05D007889 ORTHO05D009987 5.0e-09 64.3 49 69.4
Rhsim10G0173200 Rhododendron simsii HOM05D007889 ORTHO05D009987 5.0e-09 64.3 43 79.1
FvH4_1g19600 Fragaria vesca HOM05D007889 ORTHO05D009987 6.5e-09 63.9 49 69.4
FAN19G1328 Fragaria x ananassa HOM05D007889 ORTHO05D009987 6.5e-09 63.9 49 69.4
CiPaw.07G047100 Carya illinoinensis HOM05D007889 ORTHO05D009987 8.5e-09 63.5 50 70.0
Lsat_1_v5_gn_4_143420 Lactuca sativa HOM05D007889 ORTHO05D009987 8.5e-09 63.5 50 68.0
RcHm_v2.0_Chr2g0111151 Rosa chinensis HOM05D007889 ORTHO05D009987 8.5e-09 63.5 49 69.4
Aqoxy5G01377 Aquilegia oxysepala HOM05D007889 ORTHO05D009987 1.1e-08 63.2 49 71.4
QL06p035849 Quercus lobata HOM05D007889 ORTHO05D009987 1.1e-08 63.2 50 68.0
Gorai.003G037300 Gossypium raimondii HOM05D007889 ORTHO05D009987 1.5e-08 62.8 50 66.0
Peaxi162Scf00474g00715 Petunia axillaris HOM05D007889 ORTHO05D009987 1.5e-08 62.8 48 70.8
Duzib147G1657 Durio zibethinus HOM05D007889 ORTHO05D009987 1.9e-08 62.4 50 66.0
Gohir.A02G144900 Gossypium hirsutum HOM05D007889 ORTHO05D009987 1.9e-08 62.4 50 66.0
Gohir.D03G035700 Gossypium hirsutum HOM05D007889 ORTHO05D009987 1.9e-08 62.4 50 66.0
Oeu012264.1 Olea europaea HOM05D007889 ORTHO05D009987 1.9e-08 62.4 49 67.3
Sp2g28580 Schrenkiella parvula HOM05D007889 ORTHO05D009987 1.9e-08 62.4 50 64.0
Thecc.01G089900 Theobroma cacao HOM05D007889 ORTHO05D009987 1.9e-08 62.4 50 66.0
Thhalv10005325m.g Eutrema salsugineum HOM05D007889 ORTHO05D009987 2.5e-08 62.0 50 64.0
Solyc11g010680.4 Solanum lycopersicum HOM05D007889 ORTHO05D009987 2.5e-08 62.0 50 66.0
Sopen11g005480 Solanum pennellii HOM05D007889 ORTHO05D009987 2.5e-08 62.0 50 66.0
PGSC0003DMG402016199 Solanum tuberosum HOM05D007889 ORTHO05D009987 2.5e-08 62.0 50 66.0
unitig_32.g11801 Utricularia gibba HOM05D007889 ORTHO05D009987 2.5e-08 62.0 57 59.6
AL8G43080 Arabidopsis lyrata HOM05D007889 ORTHO05D009987 3.2e-08 61.6 50 64.0
Nitab4.5_0006217g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 4.2e-08 61.2 50 66.0
AT5G65495 Arabidopsis thaliana HOM05D007889 ORTHO05D009987 5.5e-08 60.8 50 64.0
Carub.0008s2635 Capsella rubella HOM05D007889 ORTHO05D009987 5.5e-08 60.8 50 64.0
COL.COLO4_27358 Corchorus olitorius HOM05D007889 ORTHO05D009987 7.2e-08 60.5 50 64.0
ECA232G4810 Erigeron canadensis HOM05D007889 ORTHO05D009987 9.4e-08 60.1 50 62.0
Nitab4.5_0006221g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 9.4e-08 60.1 50 62.0
BcaC01g02781 Brassica carinata HOM05D007889 ORTHO05D009987 1.2e-07 59.7 50 62.0
C03p60490 Brassica napus HOM05D007889 ORTHO05D009987 1.2e-07 59.7 50 62.0
BolC3t18310H Brassica oleracea HOM05D007889 ORTHO05D009987 1.2e-07 59.7 50 62.0
BraA06t26160Z Brassica rapa HOM05D007889 ORTHO05D009987 1.2e-07 59.7 50 62.0
THA.LOC109116122 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 1.2e-07 59.7 50 64.0
Aa31LG1G16500 Aethionema arabicum HOM05D007889 ORTHO05D009987 2.7e-07 58.5 50 62.0
Ah.02g123520 Amaranthus hybridus HOM05D007889 ORTHO05D009987 3.6e-07 58.2 50 62.0
EL10Ac6g15200 Beta vulgaris HOM05D007889 ORTHO05D009987 4.7e-07 57.8 50 64.0
Prupe.6G202300 Prunus persica HOM05D007889 ORTHO05D009987 4.7e-07 57.8 50 64.0
SGA_v2.0_scaffold195G40857 Striga asiatica HOM05D007889 ORTHO05D009987 4.7e-07 57.8 51 60.8
MELO3C032898.2 Cucumis melo HOM05D007889 ORTHO05D009987 6.1e-07 57.4 57 56.1
CsaV3_6G044960 Cucumis sativus L. HOM05D007889 ORTHO05D009987 6.1e-07 57.4 57 56.1
Lj4g0025467 Lotus japonicus HOM05D007889 ORTHO05D009987 6.1e-07 57.4 49 63.3
Medtr8g068560 Medicago truncatula HOM05D007889 ORTHO05D009987 6.1e-07 57.4 50 64.0
Psat4g119800 Pisum sativum HOM05D007889 ORTHO05D009987 6.1e-07 57.4 50 62.0
Ca_22615_v3 Cicer arietinum L. HOM05D007889 ORTHO05D009987 8.0e-07 57.0 50 62.0
Nitab4.5_0007872g0020 Nicotiana tabacum HOM05D007889 ORTHO05D009987 8.0e-07 57.0 49 59.2
Eucgr.L00470 Eucalyptus grandis HOM05D007889 ORTHO05D009987 1.4e-06 56.2 50 60.0
Nitab4.5_0000902g0320 Nicotiana tabacum HOM05D007889 ORTHO05D009987 2.3e-06 55.5 50 56.0
Ciclev10026840m.g Citrus clementina HOM05D007889 ORTHO05D009987 3.0e-06 55.1 50 62.0
AUR62003668 Chenopodium quinoa HOM05D007889 ORTHO05D009987 8.8e-06 53.5 50 56.0
Lalb_Chr05g0228531 Lupinus albus HOM05D007889 ORTHO05D009987 8.8e-06 53.5 49 59.2


User provided reference genes

Program Settings