Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08689 Vaccinium macrocarpon HOM05D007104 ORTHO05D008851 0.0e+00 1312.0 812 100.0
CSS0009185 Camellia sinensis var. sinensis HOM05D007104 ORTHO05D008851 4.0e-236 822.0 804 70.8
Actinidia05278 Actinidia chinensis HOM05D007104 ORTHO05D008851 2.2e-226 789.6 854 65.2
Dinv35696 Davidia involucrata HOM05D007104 ORTHO05D008851 3.5e-208 729.2 838 63.8
Hma1.2p1_0111F.1_g053700 Hydrangea macrophylla HOM05D007104 ORTHO05D008851 7.2e-201 704.9 798 64.4
GSVIVG01025541001 Vitis vinifera HOM05D007104 ORTHO05D008851 4.3e-198 695.7 801 63.0
CiPaw.09G181900 Carya illinoinensis HOM05D007104 ORTHO05D008851 4.8e-189 665.6 864 58.1
Duzib128G0648 Durio zibethinus HOM05D007104 ORTHO05D008851 4.7e-184 649.0 857 57.9
TAR633G1446 Trochodendron aralioides HOM05D007104 ORTHO05D008851 3.0e-183 646.4 860 57.2
Thecc.05G052200 Theobroma cacao HOM05D007104 ORTHO05D008851 5.2e-183 645.6 797 61.1
QL07p045556 Quercus lobata HOM05D007104 ORTHO05D008851 6.3e-181 638.6 795 60.3
Gorai.009G420800 Gossypium raimondii HOM05D007104 ORTHO05D008851 7.0e-180 635.2 870 57.4
Gohir.A04G077100 Gossypium hirsutum HOM05D007104 ORTHO05D008851 3.5e-179 632.9 869 57.4
Peaxi162Scf00005g05111 Petunia axillaris HOM05D007104 ORTHO05D008851 1.7e-178 630.6 813 58.8
Cfa017487 Carpinus fangiana HOM05D007104 ORTHO05D008851 8.5e-178 628.2 793 60.3
Nitab4.5_0006316g0040 Nicotiana tabacum HOM05D007104 ORTHO05D008851 8.0e-176 621.7 871 56.9
MD12G1126500 Malus domestica HOM05D007104 ORTHO05D008851 1.2e-174 617.8 794 58.7
RcHm_v2.0_Chr3g0468421 Rosa chinensis HOM05D007104 ORTHO05D008851 1.7e-173 614.0 780 59.7
FAN14G4814 Fragaria x ananassa HOM05D007104 ORTHO05D008851 6.3e-173 612.1 859 56.2
FAN05G0960 Fragaria x ananassa HOM05D007104 ORTHO05D008851 7.0e-172 608.6 800 58.4
FvH4_6g15120 Fragaria vesca HOM05D007104 ORTHO05D008851 5.9e-171 605.5 800 58.1
Nitab4.5_0000848g0180 Nicotiana tabacum HOM05D007104 ORTHO05D008851 5.0e-170 602.4 872 50.3
Haze_20670 Corylus avellana HOM05D007104 ORTHO05D008851 1.5e-169 600.9 814 58.0
Manes.08G001800 Manihot esculenta HOM05D007104 ORTHO05D008851 3.2e-169 599.7 863 55.4
Solyc09g007200.4 Solanum lycopersicum HOM05D007104 ORTHO05D008851 5.5e-169 599.0 869 55.2
Sopen09g002070 Solanum pennellii HOM05D007104 ORTHO05D008851 3.6e-168 596.3 866 55.3
Nn2g12960 Nelumbo nucifera HOM05D007104 ORTHO05D008851 4.7e-168 595.9 782 57.9
Sabra06G0104200 Salix brachista HOM05D007104 ORTHO05D008851 6.1e-168 595.5 864 54.5
Cc06_g03420 Coffea canephora HOM05D007104 ORTHO05D008851 8.0e-168 595.1 862 55.3
Potri.006G132700 Populus trichocarpa HOM05D007104 ORTHO05D008851 1.0e-167 594.7 858 55.2
MSTRG.19128 Avicennia marina HOM05D007104 ORTHO05D008851 1.4e-167 594.3 769 59.2
Ciclev10011055m.g Citrus clementina HOM05D007104 ORTHO05D008851 5.2e-167 592.4 781 58.1
PGR004G2266 Punica granatum HOM05D007104 ORTHO05D008851 1.5e-166 590.9 797 56.2
Migut.J00404 Erythranthe guttata HOM05D007104 ORTHO05D008851 3.4e-166 589.7 777 57.9
HanXRQChr05g0129241 Helianthus annuus HOM05D007104 ORTHO05D008851 7.5e-166 588.6 800 55.5
Sc01g0003660 Simmondsia chinensis HOM05D007104 ORTHO05D008851 4.8e-165 585.9 746 58.0
EL10Ac7g17325 Beta vulgaris HOM05D007104 ORTHO05D008851 8.3e-165 585.1 798 50.5
Lsat_1_v5_gn_2_109900 Lactuca sativa HOM05D007104 ORTHO05D008851 4.1e-164 582.8 807 55.9
Gohir.D04G116200 Gossypium hirsutum HOM05D007104 ORTHO05D008851 8.5e-162 575.1 757 59.8
CAN.G350.45 Capsicum annuum HOM05D007104 ORTHO05D008851 3.2e-161 573.2 763 58.1
C09p73820 Brassica napus HOM05D007104 ORTHO05D008851 2.7e-160 570.1 790 54.3
BolC9t60116H Brassica oleracea HOM05D007104 ORTHO05D008851 2.7e-160 570.1 790 54.3
Lj3C977G16 Lonicera japonica HOM05D007104 ORTHO05D008851 1.0e-159 568.2 811 54.3
DCAR_017721 Daucus carota HOM05D007104 ORTHO05D008851 1.8e-159 567.4 800 55.5
SGA_v2.0_scaffold126G33879 Striga asiatica HOM05D007104 ORTHO05D008851 4.0e-159 566.2 729 59.0
A10p32890 Brassica napus HOM05D007104 ORTHO05D008851 5.2e-159 565.8 786 55.3
BraA10t45326Z Brassica rapa HOM05D007104 ORTHO05D008851 5.2e-159 565.8 786 55.3
Thhalv10012661m.g Eutrema salsugineum HOM05D007104 ORTHO05D008851 5.2e-159 565.8 875 46.7
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 6.8e-159 565.5 808 51.4
Prupe.6G243100 Prunus persica HOM05D007104 ORTHO05D008851 2.0e-158 563.9 856 53.9
BcaC06g32013 Brassica carinata HOM05D007104 ORTHO05D008851 9.8e-158 561.6 788 54.4
Lj1g0014647 Lotus japonicus HOM05D007104 ORTHO05D008851 1.4e-156 557.8 793 55.4
AUR62040527 Chenopodium quinoa HOM05D007104 ORTHO05D008851 1.8e-156 557.4 784 51.7
FAN09G1206 Fragaria x ananassa HOM05D007104 ORTHO05D008851 1.8e-156 557.4 859 53.3
SalBow3G1198 Salvia bowleyana HOM05D007104 ORTHO05D008851 7.0e-156 555.4 790 50.6
Sp6g39750 Schrenkiella parvula HOM05D007104 ORTHO05D008851 1.2e-155 554.7 869 51.4
AT5G02830 Arabidopsis thaliana HOM05D007104 ORTHO05D008851 1.6e-155 554.3 797 53.6
AL6G12100 Arabidopsis lyrata HOM05D007104 ORTHO05D008851 2.0e-155 553.9 783 54.8
Carub.0006s0163 Capsella rubella HOM05D007104 ORTHO05D008851 1.3e-154 551.2 798 53.9
TWI18G0316 Tripterygium wilfordii HOM05D007104 ORTHO05D008851 5.0e-154 549.3 782 54.5
Sed0027238 Sechium edule HOM05D007104 ORTHO05D008851 1.5e-153 547.7 774 55.3
COL.COLO4_27102 Corchorus olitorius HOM05D007104 ORTHO05D008851 4.3e-153 546.2 712 59.3
arahy.Tifrunner.gnm1.ann1.UD3AFU Arachis hypogaea HOM05D007104 ORTHO05D008851 3.6e-152 543.1 779 48.0
arahy.Tifrunner.gnm1.ann1.Z3T1FA Arachis hypogaea HOM05D007104 ORTHO05D008851 1.0e-151 541.6 778 47.7
THA.LOC104826989 Tarenaya hassleriana HOM05D007104 ORTHO05D008851 1.8e-151 540.8 809 53.8
Glyma.19G177700 Glycine max HOM05D007104 ORTHO05D008851 8.9e-151 538.5 772 56.2
Aa31LG1G22070 Aethionema arabicum HOM05D007104 ORTHO05D008851 3.4e-150 536.6 820 46.2
Ca_08818_v3 Cicer arietinum L. HOM05D007104 ORTHO05D008851 3.7e-149 533.1 713 56.5
TPR.G36926 Trifolium pratense HOM05D007104 ORTHO05D008851 5.4e-148 529.3 759 54.4
Lalb_Chr20g0112911 Lupinus albus HOM05D007104 ORTHO05D008851 6.6e-146 522.3 692 58.7
CANSAT80G1630 Cannabis sativa HOM05D007104 ORTHO05D008851 1.1e-145 521.5 854 50.6
Medtr7g100550 Medicago truncatula HOM05D007104 ORTHO05D008851 5.6e-145 519.2 749 55.9
Phvul.001G174000 Phaseolus vulgaris HOM05D007104 ORTHO05D008851 7.3e-145 518.8 689 58.5
Psat3g045920 Pisum sativum HOM05D007104 ORTHO05D008851 4.7e-144 516.2 723 56.7
Hund12063 Selenicereus undatus HOM05D007104 ORTHO05D008851 6.8e-143 512.3 787 47.9
MBI05_g33311_MAGBIO Magnolia biondii HOM05D007104 ORTHO05D008851 1.9e-140 504.2 809 53.0
PSO339G1446 Papaver somniferum HOM05D007104 ORTHO05D008851 9.2e-140 501.9 803 52.9
CsaV3_4G024380 Cucumis sativus L. HOM05D007104 ORTHO05D008851 2.7e-139 500.4 857 50.6
PSO384G2670 Papaver somniferum HOM05D007104 ORTHO05D008851 3.5e-139 500.0 806 52.9
ATR0594G196 Amborella trichopoda HOM05D007104 ORTHO05D008851 6.0e-139 499.2 790 51.3
VMungo1383G0332 Vigna mungo HOM05D007104 ORTHO05D008851 3.9e-138 496.5 803 51.9
MELO3C003069.2 Cucumis melo HOM05D007104 ORTHO05D008851 4.7e-136 489.6 784 43.9
ClCG04G008780 Citrullus lanatus HOM05D007104 ORTHO05D008851 1.5e-134 484.6 844 49.6
AUR62042917 Chenopodium quinoa HOM05D007104 ORTHO05D008851 1.6e-131 474.6 777 39.9
HPP92_003603 Vanilla planifolia HOM05D007104 ORTHO05D008851 2.7e-115 420.6 727 49.4
Eucgr.K03203 Eucalyptus grandis HOM05D007104 ORTHO05D008851 1.1e-111 408.7 593 59.2
Os03g0284900 Oryza sativa ssp. japonica HOM05D007104 ORTHO05D008851 2.9e-109 400.6 778 40.4
Glyma.03G177000 Glycine max HOM05D007104 ORTHO05D008851 4.5e-102 376.7 520 62.5
SEGI_02163 Sequoiadendron giganteum HOM05D007104 ORTHO05D008851 1.3e-101 375.2 797 44.4
Aqoxy2G01885 Aquilegia oxysepala HOM05D007104 ORTHO05D008851 9.7e-89 332.4 507 50.7
Oeu034822.1 Olea europaea HOM05D007104 ORTHO05D008851 9.7e-81 305.8 344 64.0
Atru.chr8.2537 Acer truncatum HOM05D007104 ORTHO05D008851 2.9e-77 294.3 407 62.2
Cpa.g.sc45.26 Carica papaya HOM05D007104 ORTHO05D008851 1.0e-74 285.8 530 54.9
Pp3c22_3070 Physcomitrium patens HOM05D007104 ORTHO05D008851 6.9e-71 273.1 787 41.2
Atru.chr8.2538 Acer truncatum HOM05D007104 ORTHO05D008851 2.7e-67 261.2 242 55.8
Mapoly0039s0098 Marchantia polymorpha HOM05D007104 ORTHO05D008851 1.8e-66 258.5 748 40.6
Zm00001eb397200 Zea mays HOM05D007104 ORTHO05D008851 2.3e-66 258.1 652 30.1
Pp3c21_12360 Physcomitrium patens HOM05D007104 ORTHO05D008851 1.7e-61 241.9 799 38.4
CARHR210500 Cardamine hirsuta HOM05D007104 ORTHO05D008851 1.6e-51 208.8 225 50.2
unitig_16.g32855 Utricularia gibba HOM05D007104 ORTHO05D008851 8.0e-51 206.5 224 52.2
CDE02G1389 Ceratophyllum demersum HOM05D007104 ORTHO05D008851 2.1e-43 181.8 310 51.6
SMO351G0222 Selaginella moellendorffii HOM05D007104 ORTHO05D008851 2.3e-37 161.8 498 33.1
Oeu027653.1 Olea europaea HOM05D007104 ORTHO05D008851 1.0e-29 136.3 144 52.8
Hma1.2p1_0111F.1_g053720 Hydrangea macrophylla HOM05D007104 ORTHO05D008851 8.9e-26 123.2 136 54.4
Rhsim04G0181000 Rhododendron simsii HOM05D007104 ORTHO05D008851 5.8e-25 120.6 58 91.4
Pp3c22_3080 Physcomitrium patens HOM05D007104 ORTHO05D008851 2.2e-24 118.6 165 42.4
RcHm_v2.0_Chr3g0468351 Rosa chinensis HOM05D007104 ORTHO05D008851 2.3e-18 98.6 74 60.8
CBR_g39241 Chara braunii HOM05D007104 ORTHO05D008851 6.2e-11 73.9 237 45.6
Nitab4.5_0005983g0010 Nicotiana tabacum HOM05D002453 ORTHO05D002107 1.9e-07 62.4 143 28.0
Nitab4.5_0000026g0050 Nicotiana tabacum HOM05D002453 ORTHO05D002107 1.6e-06 59.3 143 27.3
arahy.Tifrunner.gnm1.ann1.ZP1L4J Arachis hypogaea HOM05D001779 ORTHO05D001753 2.1e-06 58.9 134 34.3
Prupe.1G106700 Prunus persica HOM05D001779 ORTHO05D001753 2.1e-06 58.9 134 29.1
SGA_v2.0_scaffold123G33423 Striga asiatica HOM05D001779 ORTHO05D001753 2.7e-06 58.5 134 30.6
arahy.Tifrunner.gnm1.ann1.9BU3J2 Arachis hypogaea HOM05D000103 ORTHO05D000049 4.6e-06 57.8 134 32.1
Cfa019553 Carpinus fangiana HOM05D002453 ORTHO05D008746 6.0e-06 57.4 135 28.1


User provided reference genes

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