Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08687 Vaccinium macrocarpon HOM05D000030 ORTHO05D000009 8.9e-60 233.4 118 100.0
Rhsim09G0036100 Rhododendron simsii HOM05D000447 ORTHO05D000009 2.8e-13 79.0 56 73.2
Rhsim05G0096800 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.8e-12 76.3 56 69.6
HanXRQChr09g0242491 Helianthus annuus HOM05D000030 ORTHO05D000009 1.5e-11 73.2 55 61.8
HanXRQChr04g0107561 Helianthus annuus HOM05D000030 ORTHO05D000009 2.6e-11 72.4 55 61.8
SHI17057 Sapria himalayana HOM05D000030 ORTHO05D000009 1.1e-09 67.0 55 52.7
CiPaw.03G216300 Carya illinoinensis HOM05D000030 ORTHO05D000009 1.6e-08 63.2 72 37.5
Rhsim05G0098200 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.6e-08 63.2 85 47.1
SHI24940 Sapria himalayana HOM05D000030 ORTHO05D000009 1.6e-08 63.2 55 50.9
Aqoxy5G02948 Aquilegia oxysepala HOM05D030710 ORTHO05D000009 6.0e-08 61.2 57 49.1
SHI16775 Sapria himalayana HOM05D000030 ORTHO05D000009 1.0e-07 60.5 54 50.0
Hund18167 Selenicereus undatus HOM05D015999 ORTHO05D000031 1.0e-07 60.5 54 48.1
Thecc.08G159500 Theobroma cacao HOM05D000030 ORTHO05D000009 1.0e-07 60.5 97 35.1
PGR119G1248 Punica granatum HOM05D000030 ORTHO05D000009 1.8e-07 59.7 55 50.9
Atru.chr6.1428 Acer truncatum HOM05D000030 ORTHO05D000009 2.3e-07 59.3 55 47.3
QL02p074905 Quercus lobata HOM05D000030 ORTHO05D000009 2.3e-07 59.3 53 50.9
QL03p018711 Quercus lobata HOM05D000030 ORTHO05D000009 2.3e-07 59.3 53 50.9
QL03p065377 Quercus lobata HOM05D000030 ORTHO05D000009 2.3e-07 59.3 53 50.9
Thecc.03G058900 Theobroma cacao HOM05D000030 ORTHO05D000009 2.3e-07 59.3 97 35.1
COL.COLO4_07717 Corchorus olitorius HOM05D000030 ORTHO05D000009 3.0e-07 58.9 55 43.6
COL.COLO4_19994 Corchorus olitorius HOM05D000030 ORTHO05D000009 3.0e-07 58.9 55 43.6
PGR083G0765 Punica granatum HOM05D000030 ORTHO05D000009 3.0e-07 58.9 55 49.1
PGR102G1721 Punica granatum HOM05D000030 ORTHO05D000009 3.0e-07 58.9 55 49.1
AUR62019692 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.9e-07 58.5 55 45.5
COL.COLO4_19547 Corchorus olitorius HOM05D000030 ORTHO05D000009 3.9e-07 58.5 55 43.6
PGR142G2060 Punica granatum HOM05D000030 ORTHO05D000009 3.9e-07 58.5 63 47.6
Thecc.06G002000 Theobroma cacao HOM05D000030 ORTHO05D000009 3.9e-07 58.5 68 42.6
Atru.chr3.3246 Acer truncatum HOM05D000030 ORTHO05D000009 8.7e-07 57.4 55 45.5
CiPaw.08G142600 Carya illinoinensis HOM05D000030 ORTHO05D000009 1.5e-06 56.6 55 40.0
CiPaw.03G210400 Carya illinoinensis HOM05D000030 ORTHO05D000009 1.9e-06 56.2 59 42.4
AUR62039043 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.5e-06 55.8 55 41.8
EL10Ac4g08877 Beta vulgaris HOM05D000030 ORTHO05D000031 3.3e-06 55.5 54 46.3
AUR62040058 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.3e-06 55.5 55 41.8
EL10Ac4g08641 Beta vulgaris HOM05D000030 ORTHO05D000031 4.3e-06 55.1 52 46.2
SHI03259 Sapria himalayana HOM05D000030 ORTHO05D000009 4.3e-06 55.1 46 50.0
HPP92_023536 Vanilla planifolia HOM05D000030 ORTHO05D000009 4.3e-06 55.1 58 44.8
PGR064G0018 Punica granatum HOM05D000030 ORTHO05D000009 5.6e-06 54.7 63 44.4
PGR119G1072 Punica granatum HOM05D000030 ORTHO05D000009 5.6e-06 54.7 63 44.4
EL10Ac3g05892 Beta vulgaris HOM05D000030 ORTHO05D000031 7.4e-06 54.3 55 41.8
Atru.chr6.724 Acer truncatum HOM05D000030 ORTHO05D000009 9.6e-06 53.9 66 42.4
EL10Ac8g20256 Beta vulgaris HOM05D000030 ORTHO05D000009 9.6e-06 53.9 56 46.4
AUR62009913 Chenopodium quinoa HOM05D000030 ORTHO05D001296 9.6e-06 53.9 55 41.8
AUR62017515 Chenopodium quinoa HOM05D000030 ORTHO05D000009 9.6e-06 53.9 55 41.8
AUR62034972 Chenopodium quinoa HOM05D000030 ORTHO05D000009 9.6e-06 53.9 55 41.8


User provided reference genes

Program Settings