Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08659 Vaccinium macrocarpon HOM05D005213 ORTHO05D006229 4.5e-176 621.3 354 100.0
Rhsim04G0156600 Rhododendron simsii HOM05D005213 ORTHO05D006229 1.8e-87 327.0 370 57.6
Gorai.009G039700 Gossypium raimondii HOM05D005213 ORTHO05D006229 1.4e-52 211.1 361 45.4
Gohir.D05G039200 Gossypium hirsutum HOM05D005213 ORTHO05D006229 2.4e-52 210.3 363 44.6
COL.COLO4_21169 Corchorus olitorius HOM05D005213 ORTHO05D006229 2.3e-50 203.8 324 55.6
Dinv41845 Davidia involucrata HOM05D005213 ORTHO05D006229 5.6e-49 199.1 370 51.1
Duzib187G1454 Durio zibethinus HOM05D005213 ORTHO05D006229 7.3e-49 198.7 356 46.9
Prupe.1G401300 Prunus persica HOM05D005213 ORTHO05D006229 1.0e-47 194.9 377 47.5
TWI34G0479 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 4.0e-47 193.0 351 42.5
Ciclev10008490m.g Citrus clementina HOM05D005213 ORTHO05D006229 6.8e-47 192.2 353 44.5
Duzib150G1003 Durio zibethinus HOM05D005213 ORTHO05D006229 8.9e-47 191.8 371 46.4
TAR624G0676 Trochodendron aralioides HOM05D005213 ORTHO05D006229 8.9e-47 191.8 335 46.0
Thecc.09G066400 Theobroma cacao HOM05D005213 ORTHO05D006229 3.4e-46 189.9 361 49.9
Cc08_g07800 Coffea canephora HOM05D005213 ORTHO05D006229 5.8e-46 189.1 365 47.4
Lj7P206T8 Lonicera japonica HOM05D005213 ORTHO05D006229 1.7e-45 187.6 326 44.8
Potri.006G217900 Populus trichocarpa HOM05D005213 ORTHO05D006229 2.4e-44 183.7 361 48.2
Manes.03G055700 Manihot esculenta HOM05D005213 ORTHO05D006229 3.2e-44 183.3 331 44.4
Migut.A00332 Erythranthe guttata HOM05D005213 ORTHO05D006229 4.1e-44 183.0 340 43.2
Cpa.g.sc82.19 Carica papaya HOM05D005213 ORTHO05D006229 1.2e-43 181.4 358 44.1
Manes.16G087800 Manihot esculenta HOM05D005213 ORTHO05D006229 1.2e-43 181.4 367 43.3
VMungo1309G2063 Vigna mungo HOM05D005213 ORTHO05D006229 1.2e-43 181.4 338 46.4
FAN20G0215 Fragaria x ananassa HOM05D005213 ORTHO05D006229 1.6e-43 181.0 359 45.7
MD08G1046900 Malus domestica HOM05D005213 ORTHO05D006229 6.0e-43 179.1 360 46.4
Nitab4.5_0000508g0090 Nicotiana tabacum HOM05D005213 ORTHO05D006229 1.7e-42 177.6 347 42.4
CiPaw.16G068600 Carya illinoinensis HOM05D005213 ORTHO05D006229 3.0e-42 176.8 356 44.4
MD15G1047100 Malus domestica HOM05D005213 ORTHO05D006229 6.6e-42 175.6 345 42.9
Cfa023359 Carpinus fangiana HOM05D005213 ORTHO05D006229 8.6e-42 175.3 355 43.7
FAN15G1397 Fragaria x ananassa HOM05D005213 ORTHO05D006229 3.3e-41 173.3 350 45.7
Lj1g0011388 Lotus japonicus HOM05D005213 ORTHO05D006229 5.6e-41 172.6 349 42.7
FvH4_2g37040 Fragaria vesca HOM05D005213 ORTHO05D006229 7.3e-41 172.2 352 45.7
Phvul.009G084600 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 9.5e-41 171.8 327 48.9
FAN27G3126 Fragaria x ananassa HOM05D005213 ORTHO05D006229 1.1e-39 168.3 351 45.3
RcHm_v2.0_Chr6g0304741 Rosa chinensis HOM05D005213 ORTHO05D006229 1.1e-39 168.3 360 46.4
Glyma.04G057900 Glycine max HOM05D005213 ORTHO05D006229 1.4e-39 167.9 358 43.9
CSS0041342 Camellia sinensis var. sinensis HOM05D005213 ORTHO05D006229 1.8e-39 167.5 378 42.3
Nn8g38551 Nelumbo nucifera HOM05D005213 ORTHO05D006229 1.8e-39 167.5 344 48.8
Duzib168G1397 Durio zibethinus HOM05D005213 ORTHO05D006229 3.1e-39 166.8 347 40.3
Ca_15799_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 6.8e-39 165.6 356 43.8
Peaxi162Scf00922g00016 Petunia axillaris HOM05D005213 ORTHO05D006229 8.9e-39 165.2 375 39.7
Nitab4.5_0007212g0010 Nicotiana tabacum HOM05D005213 ORTHO05D006229 2.6e-38 163.7 328 45.4
DCAR_001248 Daucus carota HOM05D005213 ORTHO05D006229 3.4e-38 163.3 330 42.4
TPR.G21422 Trifolium pratense HOM05D005213 ORTHO05D006229 4.4e-38 162.9 345 43.8
Haze_13552 Corylus avellana HOM05D005213 ORTHO05D006229 5.8e-38 162.5 357 42.3
Glyma.06G058600 Glycine max HOM05D005213 ORTHO05D006229 1.7e-37 161.0 350 44.9
CAN.G1059.3 Capsicum annuum HOM05D005213 ORTHO05D006229 2.2e-37 160.6 361 43.2
MBI19_g18107_MAGBIO Magnolia biondii HOM05D004195 ORTHO05D005309 4.9e-37 159.5 329 46.8
Lalb_Chr11g0063421 Lupinus albus HOM05D005213 ORTHO05D006229 8.3e-37 158.7 339 40.7
Medtr3g105580 Medicago truncatula HOM05D005213 ORTHO05D006229 3.2e-36 156.8 339 45.4
Psat5g033280 Pisum sativum HOM05D005213 ORTHO05D006229 3.2e-36 156.8 326 51.8
Lalb_Chr22g0349651 Lupinus albus HOM05D005213 ORTHO05D006229 5.4e-36 156.0 333 46.8
EL10Ac5g11257 Beta vulgaris HOM05D005213 ORTHO05D006229 2.1e-35 154.1 337 40.9
Eucgr.C00749 Eucalyptus grandis HOM05D005213 ORTHO05D006229 6.0e-35 152.5 363 47.1
Gorai.010G094100 Gossypium raimondii HOM05D005213 ORTHO05D006229 1.0e-34 151.8 335 38.5
Aqoxy7G04081 Aquilegia oxysepala HOM05D005213 ORTHO05D006229 1.3e-34 151.4 356 44.4
Gohir.D06G080700 Gossypium hirsutum HOM05D005213 ORTHO05D006229 1.3e-34 151.4 335 38.5
TPR.G38861 Trifolium pratense HOM05D005213 ORTHO05D006229 5.1e-34 149.4 347 43.8
PSO386G0069 Papaver somniferum HOM05D005213 ORTHO05D006229 1.1e-33 148.3 339 43.7
Hund02523 Selenicereus undatus HOM05D005213 ORTHO05D006229 1.9e-33 147.5 344 35.5
Nn6g35650 Nelumbo nucifera HOM05D005213 ORTHO05D006229 2.5e-33 147.1 343 44.6
Oeu020105.1 Olea europaea HOM05D005213 ORTHO05D006229 2.5e-33 147.1 328 41.5
TWI32G0481 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 7.3e-33 145.6 352 37.8
Gohir.A06G081000 Gossypium hirsutum HOM05D005213 ORTHO05D006229 6.2e-32 142.5 347 37.5
GSVIVG01035506001 Vitis vinifera HOM05D005213 ORTHO05D006229 2.3e-31 140.6 330 37.6
ClCG08G009670 Citrullus lanatus HOM05D005213 ORTHO05D006229 6.8e-31 139.0 356 37.9
HanXRQChr08g0228011 Helianthus annuus HOM05D005213 ORTHO05D006229 1.5e-30 137.9 336 43.8
SGA_v2.0_scaffold22G09922 Striga asiatica HOM05D005213 ORTHO05D006229 1.5e-30 137.9 328 35.4
HanXRQChr03g0067421 Helianthus annuus HOM05D005213 ORTHO05D006229 9.9e-30 135.2 329 40.1
MELO3C026560.2 Cucumis melo HOM05D005213 ORTHO05D006229 9.2e-28 128.6 345 33.9
Medtr1g014750 Medicago truncatula HOM05D005213 ORTHO05D006229 2.1e-27 127.5 304 40.8
ECA234G4818 Erigeron canadensis HOM05D005213 ORTHO05D006229 4.6e-27 126.3 306 42.2
ATR0681G043 Amborella trichopoda HOM05D005213 ORTHO05D006229 6.0e-27 125.9 329 36.2
AUR62032196 Chenopodium quinoa HOM05D005213 ORTHO05D006229 1.0e-26 125.2 347 31.1
Hma1.2p1_0920F.1_g236590 Hydrangea macrophylla HOM05D005213 ORTHO05D006229 5.1e-26 122.9 336 37.8
CsaV3_6G031800 Cucumis sativus L. HOM05D005213 ORTHO05D006229 8.6e-26 122.1 322 32.9
Cfa017841 Carpinus fangiana HOM05D005213 ORTHO05D006229 1.9e-25 120.9 325 37.5
PSO223G0037 Papaver somniferum HOM05D005213 ORTHO05D006229 7.3e-25 119.0 344 38.4
PGR142G1942 Punica granatum HOM05D005213 ORTHO05D006229 3.6e-24 116.7 321 42.7
HanXRQChr10g0309951 Helianthus annuus HOM05D005213 ORTHO05D006229 1.8e-23 114.4 298 39.9
Ca_13089_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 5.2e-23 112.8 306 37.3
ECA240G0440 Erigeron canadensis HOM05D005213 ORTHO05D006229 8.9e-23 112.1 361 33.8
CDE05G3316 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 2.6e-22 110.5 334 33.8
Haze_18367 Corylus avellana HOM05D005213 ORTHO05D006229 2.6e-22 110.5 324 38.0
Gohir.A05G037666 Gossypium hirsutum HOM05D005213 ORTHO05D006229 4.4e-22 109.8 166 44.6
CANSAT25G2504 Cannabis sativa HOM05D005213 ORTHO05D006229 5.8e-22 109.4 328 33.2
Sc10g0009530 Simmondsia chinensis HOM05D005213 ORTHO05D006229 6.4e-21 105.9 325 31.7
THA.LOC104810950 Tarenaya hassleriana HOM05D005213 ORTHO05D006229 2.4e-20 104.0 315 44.1
Oeu022129.1 Olea europaea HOM05D005213 ORTHO05D006229 7.1e-20 102.4 310 34.5
Sed0001538 Sechium edule HOM05D005213 ORTHO05D006229 1.7e-18 97.8 314 31.2
Oeu030214.1 Olea europaea HOM05D005213 ORTHO05D006229 2.3e-18 97.4 317 37.5
MSTRG.11768 Avicennia marina HOM05D005213 ORTHO05D006229 3.0e-18 97.1 290 36.9
Solyc08g067270.3 Solanum lycopersicum HOM05D005213 ORTHO05D006229 3.9e-18 96.7 222 38.3
unitig_32.g10930 Utricularia gibba HOM05D005213 ORTHO05D006229 3.9e-18 96.7 324 32.7
Psat6g023400 Pisum sativum HOM05D005213 ORTHO05D006229 1.1e-17 95.1 322 35.1
Zm00001eb019450 Zea mays HOM05D005213 ORTHO05D006229 3.3e-17 93.6 314 37.6
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 3.6e-16 90.1 270 35.2
AUR62036963 Chenopodium quinoa HOM05D005213 ORTHO05D006229 1.1e-15 88.6 350 26.9
Sopen08g021200 Solanum pennellii HOM05D005213 ORTHO05D006229 1.4e-15 88.2 95 54.7
Actinidia27819 Actinidia chinensis HOM05D005213 ORTHO05D006229 2.0e-14 84.3 70 70.0
CDE05G3450 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 2.0e-14 84.3 316 31.0
Actinidia26432 Actinidia chinensis HOM05D005213 ORTHO05D006229 5.8e-14 82.8 109 52.3
Aa31LG1G13440 Aethionema arabicum HOM05D005213 ORTHO05D006229 7.6e-14 82.4 157 43.3
Sp6g23210 Schrenkiella parvula HOM05D005213 ORTHO05D006229 9.9e-14 82.0 53 84.9
Atru.chr7.1814 Acer truncatum HOM05D005213 ORTHO05D006229 1.3e-13 81.6 44 93.2
AL6G32940 Arabidopsis lyrata HOM05D005213 ORTHO05D006229 1.7e-13 81.3 50 88.0
BcaB01g04752 Brassica carinata HOM05D005213 ORTHO05D006229 1.7e-13 81.3 50 86.0
BcaB08g36461 Brassica carinata HOM05D005213 ORTHO05D006229 2.2e-13 80.9 50 86.0
BcaC01g06616 Brassica carinata HOM05D005213 ORTHO05D006229 2.2e-13 80.9 50 86.0
BcaC03g13850 Brassica carinata HOM05D005213 ORTHO05D006229 2.2e-13 80.9 47 89.4
A03p10500 Brassica napus HOM05D005213 ORTHO05D006229 2.2e-13 80.9 50 86.0
C03p12080 Brassica napus HOM05D005213 ORTHO05D006229 2.2e-13 80.9 50 86.0
BolC2t07127H Brassica oleracea HOM05D005213 ORTHO05D006229 2.2e-13 80.9 47 89.4
BolC3t13679H Brassica oleracea HOM05D005213 ORTHO05D006229 2.2e-13 80.9 50 86.0
BraA03t10362Z Brassica rapa HOM05D005213 ORTHO05D006229 2.2e-13 80.9 50 86.0
AT5G21280 Arabidopsis thaliana HOM05D005213 ORTHO05D006229 2.9e-13 80.5 47 89.4
A10p18740 Brassica napus HOM05D005213 ORTHO05D006229 4.9e-13 79.7 50 84.0
BraA10t43954Z Brassica rapa HOM05D005213 ORTHO05D006229 4.9e-13 79.7 50 84.0
BraA03t10361Z Brassica rapa HOM05D005213 ORTHO05D006229 6.4e-13 79.3 50 84.0
CARHR191550 Cardamine hirsuta HOM05D005213 ORTHO05D006229 6.4e-13 79.3 50 86.0
SalBow8G0306 Salvia bowleyana HOM05D005213 ORTHO05D006229 6.4e-13 79.3 153 44.4
BNapus_Darmor_BZH_scaffold_38p00940 Brassica napus HOM05D005213 ORTHO05D006229 8.4e-13 79.0 47 87.2
C09p54690 Brassica napus HOM05D005213 ORTHO05D006229 8.4e-13 79.0 50 84.0
BolC9t58333H Brassica oleracea HOM05D005213 ORTHO05D006229 8.4e-13 79.0 50 84.0
BraA02t05631Z Brassica rapa HOM05D005213 ORTHO05D006229 8.4e-13 79.0 47 87.2
Carub.0006s1962 Capsella rubella HOM05D005213 ORTHO05D006229 8.4e-13 79.0 47 87.2
BcaB05g22758 Brassica carinata HOM05D005213 ORTHO05D006229 1.1e-12 78.6 47 87.2
BcaC04g19528 Brassica carinata HOM05D005213 ORTHO05D006229 1.4e-12 78.2 50 84.0
Thhalv10014216m.g Eutrema salsugineum HOM05D005213 ORTHO05D006229 1.9e-12 77.8 43 93.0
CDE11G0900 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 2.1e-11 74.3 205 36.1
HanXRQChr09g0261901 Helianthus annuus HOM05D005213 ORTHO05D006229 2.3e-10 70.9 164 34.8
Phvul.001G044200 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 2.3e-10 70.9 306 30.4
VMungo0477G0001 Vigna mungo HOM05D005213 ORTHO05D006229 1.5e-09 68.2 196 35.2
Lalb_Chr08g0244621 Lupinus albus HOM05D005213 ORTHO05D006229 1.6e-08 64.7 92 42.4
HPP92_013274 Vanilla planifolia HOM05D005213 ORTHO05D006229 1.1e-07 62.0 319 23.5
Zm00001eb109280 Zea mays HOM05D005213 ORTHO05D006229 1.4e-07 61.6 67 59.7
Phvul.001G044300 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 4.0e-07 60.1 183 34.4
Phvul.001G044400 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 2.6e-06 57.4 373 26.5
ClCG05G015950 Citrullus lanatus HOM05D005213 ORTHO05D006229 3.4e-06 57.0 139 36.7


User provided reference genes

Program Settings