Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08628 Vaccinium macrocarpon HOM05D007094 ORTHO05D008264 4.7e-126 454.5 225 100.0
Rhsim13G0205900 Rhododendron simsii HOM05D007094 ORTHO05D008264 6.7e-32 141.7 86 76.7
Dinv22210 Davidia involucrata HOM05D007094 ORTHO05D008264 7.4e-23 111.7 77 67.5
Actinidia06990 Actinidia chinensis HOM05D007094 ORTHO05D008264 2.4e-21 106.7 78 69.2
CiPaw.14G110600 Carya illinoinensis HOM05D007094 ORTHO05D008264 6.5e-19 98.6 77 59.7
Prupe.6G146500 Prunus persica HOM05D007094 ORTHO05D008264 2.1e-17 93.6 78 55.1
Duzib170G0850 Durio zibethinus HOM05D007094 ORTHO05D008264 2.7e-17 93.2 78 57.7
TAR633G0748 Trochodendron aralioides HOM05D007094 ORTHO05D008264 2.7e-17 93.2 82 52.4
Gohir.A09G108300 Gossypium hirsutum HOM05D007094 ORTHO05D008264 4.7e-17 92.4 82 54.9
Glyma.02G277800 Glycine max HOM05D007094 ORTHO05D008264 6.1e-17 92.0 82 54.9
Manes.01G177900 Manihot esculenta HOM05D007094 ORTHO05D008264 1.0e-16 91.3 85 56.5
QL01p016497 Quercus lobata HOM05D007094 ORTHO05D008264 1.0e-16 91.3 84 56.0
QL01p024141 Quercus lobata HOM05D007094 ORTHO05D008264 1.0e-16 91.3 84 56.0
Thecc.09G254700 Theobroma cacao HOM05D007094 ORTHO05D008264 1.0e-16 91.3 83 55.4
Glyma.14G036700 Glycine max HOM05D007094 ORTHO05D008264 1.4e-16 90.9 82 53.7
Cfa003293 Carpinus fangiana HOM05D007094 ORTHO05D008264 1.8e-16 90.5 83 51.8
Aqoxy2G00509 Aquilegia oxysepala HOM05D007094 ORTHO05D008264 3.0e-16 89.7 82 52.4
MSTRG.21339 Avicennia marina HOM05D007094 ORTHO05D008264 3.9e-16 89.4 78 59.0
Duzib168G1032 Durio zibethinus HOM05D007094 ORTHO05D008264 5.1e-16 89.0 83 53.0
RcHm_v2.0_Chr5g0048901 Rosa chinensis HOM05D007094 ORTHO05D008264 6.7e-16 88.6 83 51.8
FvH4_3g26230 Fragaria vesca HOM05D007094 ORTHO05D008264 1.1e-15 87.8 83 50.6
FAN11G3047 Fragaria x ananassa HOM05D007094 ORTHO05D008264 1.1e-15 87.8 83 50.6
Gohir.D09G105400 Gossypium hirsutum HOM05D007094 ORTHO05D008264 2.0e-15 87.0 83 54.2
Gorai.006G122200 Gossypium raimondii HOM05D007094 ORTHO05D008264 2.0e-15 87.0 83 54.2
MD11G1174500 Malus domestica HOM05D007094 ORTHO05D008264 2.0e-15 87.0 83 50.6
MELO3C014546.2 Cucumis melo HOM05D007094 ORTHO05D008264 2.6e-15 86.7 82 52.4
FAN25G3244 Fragaria x ananassa HOM05D007094 ORTHO05D008264 2.6e-15 86.7 78 51.3
GSVIVG01037355001 Vitis vinifera HOM05D007094 ORTHO05D008264 4.4e-15 85.9 82 54.9
Cpa.g.sc743.4 Carica papaya HOM05D007094 ORTHO05D008264 5.7e-15 85.5 78 57.7
FAN21G1281 Fragaria x ananassa HOM05D007094 ORTHO05D008264 5.7e-15 85.5 78 51.3
Phvul.008G203100 Phaseolus vulgaris HOM05D007094 ORTHO05D008264 7.4e-15 85.1 92 50.0
Haze_23270 Corylus avellana HOM05D007094 ORTHO05D008264 9.7e-15 84.7 83 49.4
CANSAT54G2518 Cannabis sativa HOM05D007094 ORTHO05D008264 1.3e-14 84.3 95 47.4
SGA_v2.0_scaffold29G12215 Striga asiatica HOM05D007094 ORTHO05D008264 1.3e-14 84.3 77 54.5
Hma1.2p1_0460F.1_g157640 Hydrangea macrophylla HOM05D007094 ORTHO05D008264 1.7e-14 84.0 102 52.0
LjContig00564g0008375 Lotus japonicus HOM05D007094 ORTHO05D008264 2.8e-14 83.2 83 51.8
Nn7g36894 Nelumbo nucifera HOM05D007094 ORTHO05D008264 6.3e-14 82.0 78 52.6
Lalb_Chr17g0347841 Lupinus albus HOM05D007094 ORTHO05D008264 8.2e-14 81.6 86 50.0
PSO339G5619 Papaver somniferum HOM05D007094 ORTHO05D008264 1.1e-13 81.3 79 50.6
Migut.D00679 Erythranthe guttata HOM05D007094 ORTHO05D008264 1.8e-13 80.5 77 49.4
Nitab4.5_0000390g0140 Nicotiana tabacum HOM05D021104 ORTHO05D008264 1.8e-13 80.5 122 40.2
PSO384G3224 Papaver somniferum HOM05D007094 ORTHO05D008264 1.8e-13 80.5 79 49.4
Sc16g0010910 Simmondsia chinensis HOM05D007094 ORTHO05D008264 1.8e-13 80.5 82 51.2
TPR.G16423 Trifolium pratense HOM05D007094 ORTHO05D008264 1.8e-13 80.5 86 50.0
VMungo0647G0750 Vigna mungo HOM05D007094 ORTHO05D008264 1.8e-13 80.5 109 43.1
ATR0307G079 Amborella trichopoda HOM05D007094 ORTHO05D008264 2.4e-13 80.1 77 48.1
Medtr5g089030 Medicago truncatula HOM05D007094 ORTHO05D008264 2.4e-13 80.1 89 51.7
TWI31G1326 Tripterygium wilfordii HOM05D007094 ORTHO05D008264 2.4e-13 80.1 84 51.2
Psat0s2305g0120 Pisum sativum HOM05D007094 ORTHO05D008264 3.1e-13 79.7 86 48.8
Duzib150G1213 Durio zibethinus HOM05D007094 ORTHO05D008264 4.1e-13 79.3 83 48.2
Peaxi162Scf00032g02018 Petunia axillaris HOM05D021104 ORTHO05D008264 5.3e-13 79.0 141 39.0
MSTRG.21340 Avicennia marina HOM05D007094 ORTHO05D008264 1.2e-12 77.8 77 55.8
Lalb_Chr04g0249301 Lupinus albus HOM05D007094 ORTHO05D008264 1.6e-12 77.4 84 48.8
Nitab4.5_0006052g0020 Nicotiana tabacum HOM05D021104 ORTHO05D008264 2.0e-12 77.0 78 50.0
PGR119G0280 Punica granatum HOM05D007094 ORTHO05D008264 7.7e-12 75.1 93 47.3
Atru.chr3.2855 Acer truncatum HOM05D007094 ORTHO05D008264 2.9e-11 73.2 82 48.8
Atru.chr3.2857 Acer truncatum HOM05D007094 ORTHO05D008264 2.9e-11 73.2 82 48.8
HanXRQChr12g0381391 Helianthus annuus HOM05D007094 ORTHO05D008264 3.8e-11 72.8 77 51.9
Hund21962 Selenicereus undatus HOM05D007094 ORTHO05D008264 3.8e-11 72.8 95 46.3
Ciclev10017201m.g Citrus clementina HOM05D007094 ORTHO05D008264 5.0e-11 72.4 83 47.0
Sed0011068 Sechium edule HOM05D007094 ORTHO05D008264 5.0e-11 72.4 83 51.8
DCAR_029979 Daucus carota HOM05D007094 ORTHO05D008264 6.5e-11 72.0 64 53.1
Lsat_1_v5_gn_2_26200 Lactuca sativa HOM05D007094 ORTHO05D008264 8.5e-11 71.6 77 50.6
arahy.Tifrunner.gnm1.ann1.MLT6HR Arachis hypogaea HOM05D007094 ORTHO05D008264 1.5e-10 70.9 82 50.0
COL.COLO4_24933 Corchorus olitorius HOM05D007094 ORTHO05D008264 1.9e-10 70.5 78 48.7
MBI13_g09208_MAGBIO Magnolia biondii HOM05D007094 ORTHO05D008264 1.9e-10 70.5 77 44.2
ECA238G4818 Erigeron canadensis HOM05D007094 ORTHO05D008264 3.2e-10 69.7 77 49.4
PGSC0003DMG400004429 Solanum tuberosum HOM05D021104 ORTHO05D008264 4.2e-10 69.3 78 43.6
ClCG02G022690 Citrullus lanatus HOM05D007094 ORTHO05D008264 5.5e-10 68.9 82 46.3
THA.LOC104811204 Tarenaya hassleriana HOM05D007094 ORTHO05D008264 5.5e-10 68.9 83 47.0
Ah.04g159660 Amaranthus hybridus HOM05D007094 ORTHO05D008264 2.1e-09 67.0 83 45.8
arahy.Tifrunner.gnm1.ann1.WS3KYJ Arachis hypogaea HOM05D007094 ORTHO05D008264 2.7e-09 66.6 80 48.8
Potri.009G069000 Populus trichocarpa HOM05D007094 ORTHO05D008264 4.7e-09 65.9 98 41.8
arahy.Tifrunner.gnm1.ann1.S7BBNZ Arachis hypogaea HOM05D007094 ORTHO05D008264 6.1e-09 65.5 80 48.8
Solyc01g008680.4 Solanum lycopersicum HOM05D021104 ORTHO05D008264 1.0e-08 64.7 78 43.6
Sopen01g004200 Solanum pennellii HOM05D021104 ORTHO05D008264 1.0e-08 64.7 140 33.6
Cc01_g06340 Coffea canephora HOM05D007094 ORTHO05D008264 2.3e-08 63.5 77 48.1
unitig_52.g16873 Utricularia gibba HOM05D007094 ORTHO05D008264 2.3e-08 63.5 77 42.9
DCAR_029904 Daucus carota HOM05D007094 ORTHO05D008264 3.0e-08 63.2 56 55.4
Oeu001497.1 Olea europaea HOM05D007094 ORTHO05D008264 4.0e-08 62.8 77 48.1
Carub.0006s1075 Capsella rubella HOM05D007094 ORTHO05D008264 1.1e-07 61.2 83 43.4
HPP92_015618 Vanilla planifolia HOM05D007094 ORTHO05D008264 1.1e-07 61.2 77 37.7
Solyc11g065080.2 Solanum lycopersicum HOM05D007094 ORTHO05D008264 1.5e-07 60.8 83 44.6
CDE04G2345 Ceratophyllum demersum HOM05D007094 ORTHO05D008264 2.6e-07 60.1 92 38.0
EL10Ac4g10089 Beta vulgaris HOM05D007094 ORTHO05D008264 3.3e-07 59.7 80 46.2
Potri.001G274400 Populus trichocarpa HOM05D007094 ORTHO05D008264 4.4e-07 59.3 82 41.5
Sopen11g024820 Solanum pennellii HOM05D007094 ORTHO05D008264 4.4e-07 59.3 86 41.9
PGSC0003DMG402031249 Solanum tuberosum HOM05D007094 ORTHO05D008264 4.4e-07 59.3 86 41.9
AT5G12240 Arabidopsis thaliana HOM05D007094 ORTHO05D008264 7.5e-07 58.5 78 42.3
A03p05490 Brassica napus HOM05D007094 ORTHO05D008264 7.5e-07 58.5 86 43.0
BraA03t09887Z Brassica rapa HOM05D007094 ORTHO05D008264 7.5e-07 58.5 86 43.0
C03p06400 Brassica napus HOM05D007094 ORTHO05D008264 9.7e-07 58.2 86 41.9
Sabra16G0168900 Salix brachista HOM05D007094 ORTHO05D008264 9.7e-07 58.2 99 39.4
CARHR200870 Cardamine hirsuta HOM05D007094 ORTHO05D008264 1.7e-06 57.4 83 39.8
BcaB01g05415 Brassica carinata HOM05D007094 ORTHO05D008264 2.2e-06 57.0 86 41.9
Lj1A303G25 Lonicera japonica HOM05D007094 ORTHO05D008264 3.7e-06 56.2 37 62.2
Haze_25678 Corylus avellana HOM05D007094 ORTHO05D008264 6.3e-06 55.5 62 45.2
SalBow6G5897 Salvia bowleyana HOM05D007094 ORTHO05D008264 8.2e-06 55.1 57 50.9


User provided reference genes

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