Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08602 Vaccinium macrocarpon HOM05D005866 ORTHO05D007078 3.3e-115 418.7 260 100.0
Dinv35509 Davidia involucrata HOM05D005866 ORTHO05D007078 6.7e-68 261.5 252 69.4
Dinv14530 Davidia involucrata HOM05D005866 ORTHO05D007078 1.5e-67 260.4 252 69.0
CSS0007949 Camellia sinensis var. sinensis HOM05D005866 ORTHO05D007078 1.9e-67 260.0 264 71.2
CSS0025068 Camellia sinensis var. sinensis HOM05D005866 ORTHO05D007078 1.9e-67 260.0 264 71.2
Potri.006G096700 Populus trichocarpa HOM05D005866 ORTHO05D007078 2.2e-63 246.5 257 52.5
Sabra06G0074300 Salix brachista HOM05D005866 ORTHO05D007078 5.5e-62 241.9 258 62.4
Duzib128G1899 Durio zibethinus HOM05D005866 ORTHO05D007078 3.0e-60 236.1 260 65.8
CiPaw.09G206400 Carya illinoinensis HOM05D005866 ORTHO05D007078 2.6e-59 233.0 249 59.4
GSVIVG01034004001 Vitis vinifera HOM05D000012 ORTHO05D000567 2.6e-59 233.0 259 64.1
TAR623G0986 Trochodendron aralioides HOM05D005866 ORTHO05D007078 4.4e-59 232.3 252 61.9
ECA247G0127 Erigeron canadensis HOM05D005866 ORTHO05D007078 5.7e-59 231.9 268 52.2
Ciclev10012537m.g Citrus clementina HOM05D005866 ORTHO05D007078 4.1e-57 225.7 252 63.9
Haze_20956 Corylus avellana HOM05D005866 ORTHO05D007078 9.1e-57 224.6 257 61.5
Thecc.05G021700 Theobroma cacao HOM05D005866 ORTHO05D007078 9.1e-57 224.6 259 61.4
Lj2C80T14 Lonicera japonica HOM05D005866 ORTHO05D007078 1.5e-56 223.8 263 52.9
Cpa.g.sc56.117 Carica papaya HOM05D005866 ORTHO05D007078 5.9e-56 221.9 259 61.8
Manes.09G102400 Manihot esculenta HOM05D005866 ORTHO05D007078 5.9e-56 221.9 255 62.7
Prupe.6G271100 Prunus persica HOM05D000012 ORTHO05D000567 1.0e-55 221.1 258 58.1
FvH4_6g11980 Fragaria vesca HOM05D005866 ORTHO05D007078 2.2e-55 219.9 259 57.9
FAN14G3397 Fragaria x ananassa HOM05D000012 ORTHO05D000567 2.9e-55 219.5 259 57.9
FAN14G3518 Fragaria x ananassa HOM05D005866 ORTHO05D007078 3.8e-55 219.2 260 52.7
Lsat_1_v5_gn_9_36061 Lactuca sativa HOM05D005866 ORTHO05D007078 1.1e-54 217.6 265 59.2
MD04G1147400 Malus domestica HOM05D005866 ORTHO05D007078 1.1e-54 217.6 258 51.6
FAN09G2814 Fragaria x ananassa HOM05D000012 ORTHO05D007078 3.2e-54 216.1 259 55.6
FAN05G0379 Fragaria x ananassa HOM05D000012 ORTHO05D000567 1.2e-53 214.2 259 61.4
FAN02G1355 Fragaria x ananassa HOM05D005866 ORTHO05D007078 2.1e-53 213.4 259 57.1
PGSC0003DMG400011090 Solanum tuberosum HOM05D005866 ORTHO05D007078 6.1e-53 211.8 258 58.5
TWI74G1551 Tripterygium wilfordii HOM05D005866 ORTHO05D007078 7.9e-53 211.5 260 61.2
AUR62042946 Chenopodium quinoa HOM05D005866 ORTHO05D007078 2.3e-52 209.9 262 47.7
Gohir.D01G215200 Gossypium hirsutum HOM05D005866 ORTHO05D007078 3.0e-52 209.5 256 50.8
unitig_578.g15896 Utricularia gibba HOM05D005866 ORTHO05D007078 3.9e-52 209.1 255 59.2
DCAR_015452 Daucus carota HOM05D005866 ORTHO05D007078 5.2e-52 208.8 262 60.7
Peaxi162Scf00141g00718 Petunia axillaris HOM05D005866 ORTHO05D007078 1.1e-51 207.6 258 58.9
Sopen10g034540 Solanum pennellii HOM05D005866 ORTHO05D007078 1.3e-50 204.1 258 57.0
Gohir.A01G225500 Gossypium hirsutum HOM05D005866 ORTHO05D007078 3.7e-50 202.6 256 59.8
Ah.12g060060 Amaranthus hybridus HOM05D005866 ORTHO05D007078 6.3e-50 201.8 256 58.6
Aqoxy1G00701 Aquilegia oxysepala HOM05D005866 ORTHO05D007078 6.3e-50 201.8 257 49.4
Cc06_g01630 Coffea canephora HOM05D005866 ORTHO05D007078 6.3e-50 201.8 259 59.5
CAN.G1297.4 Capsicum annuum HOM05D005866 ORTHO05D007078 1.2e-48 197.6 254 57.9
Sc01g0006840 Simmondsia chinensis HOM05D005866 ORTHO05D007078 1.6e-48 197.2 259 57.9
AUR62025814 Chenopodium quinoa HOM05D005866 ORTHO05D007078 4.5e-48 195.7 262 46.2
Lj3g0009346 Lotus japonicus HOM05D005866 ORTHO05D007078 5.9e-48 195.3 240 48.8
Phvul.008G107300 Phaseolus vulgaris HOM05D005866 ORTHO05D007078 5.9e-48 195.3 261 51.3
Glyma.18G197300 Glycine max HOM05D005866 ORTHO05D007078 1.3e-47 194.1 244 48.8
Nitab4.5_0004912g0060 Nicotiana tabacum HOM05D005866 ORTHO05D007078 1.3e-47 194.1 222 61.7
VMungo1383G0141 Vigna mungo HOM05D005866 ORTHO05D007078 1.3e-47 194.1 261 49.0
Carub.0003s0821 Capsella rubella HOM05D005866 ORTHO05D007078 3.8e-47 192.6 264 55.3
Nn2g11373 Nelumbo nucifera HOM05D005866 ORTHO05D007078 6.5e-47 191.8 276 55.1
Atru.chr8.2203 Acer truncatum HOM05D005866 ORTHO05D007078 8.5e-47 191.4 264 46.6
AT3G09050 Arabidopsis thaliana HOM05D005866 ORTHO05D007078 1.5e-46 190.7 261 55.2
PGR031G2542 Punica granatum HOM05D005866 ORTHO05D007078 1.5e-46 190.7 266 57.9
Glyma.07G145800 Glycine max HOM05D005866 ORTHO05D007078 1.9e-46 190.3 261 46.0
Solyc10g085080.3 Solanum lycopersicum HOM05D005866 ORTHO05D007078 3.2e-46 189.5 274 53.6
TPR.G1580 Trifolium pratense HOM05D005866 ORTHO05D007078 9.4e-46 188.0 258 45.0
Sed0005881 Sechium edule HOM05D005866 ORTHO05D007078 2.1e-45 186.8 258 52.3
BcaC05g29639 Brassica carinata HOM05D005866 ORTHO05D007078 2.7e-45 186.4 251 56.2
CsaV3_4G026010 Cucumis sativus L. HOM05D005866 ORTHO05D007078 2.7e-45 186.4 261 46.4
COL.COLO4_14593 Corchorus olitorius HOM05D005866 ORTHO05D007078 3.6e-45 186.0 258 59.3
Aa31LG3G1580 Aethionema arabicum HOM05D005866 ORTHO05D007078 4.7e-45 185.7 259 45.6
Thhalv10021354m.g Eutrema salsugineum HOM05D005866 ORTHO05D007078 4.7e-45 185.7 257 55.6
Lj1g0011685 Lotus japonicus HOM05D005866 ORTHO05D007078 4.7e-45 185.7 261 45.2
AL3G20110 Arabidopsis lyrata HOM05D005866 ORTHO05D007078 8.0e-45 184.9 255 55.7
Sopen09g007090 Solanum pennellii HOM05D005866 ORTHO05D007078 8.0e-45 184.9 255 55.3
PSO384G0902 Papaver somniferum HOM05D005866 ORTHO05D007078 1.0e-44 184.5 253 55.3
A05p39790 Brassica napus HOM05D005866 ORTHO05D007078 1.4e-44 184.1 251 55.8
BraA05t22763Z Brassica rapa HOM05D005866 ORTHO05D007078 1.4e-44 184.1 251 55.8
Nitab4.5_0001837g0050 Nicotiana tabacum HOM05D005866 ORTHO05D007078 1.8e-44 183.7 261 54.0
CANSAT35G0638 Cannabis sativa HOM05D005866 ORTHO05D007078 2.3e-44 183.3 257 54.9
Sp3g07500 Schrenkiella parvula HOM05D005866 ORTHO05D007078 2.3e-44 183.3 253 56.1
MSTRG.5595 Avicennia marina HOM05D005866 ORTHO05D007078 4.0e-44 182.6 262 56.5
BcaC09g48050 Brassica carinata HOM05D005866 ORTHO05D007078 6.7e-44 181.8 250 56.4
Phvul.010G008600 Phaseolus vulgaris HOM05D005866 ORTHO05D007078 6.7e-44 181.8 243 56.8
C05p58830 Brassica napus HOM05D005866 ORTHO05D007078 8.8e-44 181.4 251 55.8
BcaC09g48005 Brassica carinata HOM05D005866 ORTHO05D007078 1.2e-43 181.0 207 61.4
BolC5t34535H Brassica oleracea HOM05D005866 ORTHO05D007078 1.2e-43 181.0 251 55.8
VMungo0331G1214 Vigna mungo HOM05D005866 ORTHO05D007078 1.2e-43 181.0 240 57.1
Gorai.002G261300 Gossypium raimondii HOM05D005866 ORTHO05D007078 2.6e-43 179.9 256 57.4
Nitab4.5_0000652g0170 Nicotiana tabacum HOM05D005866 ORTHO05D007078 7.5e-43 178.3 229 59.4
arahy.Tifrunner.gnm1.ann1.Q1H550 Arachis hypogaea HOM05D005866 ORTHO05D007078 9.7e-43 177.9 257 44.0
Nitab4.5_0000008g0810 Nicotiana tabacum HOM05D005866 ORTHO05D007078 9.7e-43 177.9 259 52.9
BraA01t04319Z Brassica rapa HOM05D005866 ORTHO05D007078 1.3e-42 177.6 217 49.3
CARHR083410 Cardamine hirsuta HOM05D005866 ORTHO05D007078 1.7e-42 177.2 261 53.6
CAN.G338.58 Capsicum annuum HOM05D005866 ORTHO05D007078 2.8e-42 176.4 263 52.9
ClCG04G007220 Citrullus lanatus HOM05D005866 ORTHO05D007078 4.8e-42 175.6 217 56.2
Medtr7g067000 Medicago truncatula HOM05D005866 ORTHO05D007078 6.3e-42 175.3 257 42.8
Eucgr.B02792 Eucalyptus grandis HOM05D005866 ORTHO05D007078 8.2e-42 174.9 267 52.1
PGSC0003DMG400020319 Solanum tuberosum HOM05D005866 ORTHO05D007078 1.4e-41 174.1 263 52.1
THA.LOC104816219 Tarenaya hassleriana HOM05D005866 ORTHO05D007078 1.4e-41 174.1 260 56.2
BolC1t05477H Brassica oleracea HOM05D005866 ORTHO05D007078 5.3e-41 172.2 249 54.6
Psat3g131120 Pisum sativum HOM05D005866 ORTHO05D007078 7.0e-41 171.8 257 40.5
ECA247G1841 Erigeron canadensis HOM05D005866 ORTHO05D007078 2.7e-40 169.9 213 50.2
MELO3C003227.2 Cucumis melo HOM05D005866 ORTHO05D007078 4.5e-40 169.1 247 50.6
CDE03G0505 Ceratophyllum demersum HOM05D005866 ORTHO05D007078 3.8e-39 166.0 257 52.5
Ca_07614_v3 Cicer arietinum L. HOM05D005866 ORTHO05D007078 5.0e-39 165.6 237 41.8
arahy.Tifrunner.gnm1.ann1.LP8IIZ Arachis hypogaea HOM05D005866 ORTHO05D007078 1.1e-38 164.5 258 42.2
SGA_v2.0_scaffold85G26760 Striga asiatica HOM05D005866 ORTHO05D007078 3.2e-38 162.9 142 62.0
Psat7g247600 Pisum sativum HOM05D005866 ORTHO05D007078 4.2e-38 162.5 251 43.0
Solyc09g014215.2 Solanum lycopersicum HOM05D005866 ORTHO05D007078 4.2e-38 162.5 266 50.4
Lj2P1203T18 Lonicera japonica HOM05D005866 ORTHO05D007078 7.2e-38 161.8 150 62.0
RcHm_v2.0_Chr3g0463811 Rosa chinensis HOM05D005866 ORTHO05D007078 2.7e-37 159.8 146 62.3
Migut.J00221 Erythranthe guttata HOM05D005866 ORTHO05D007078 4.7e-37 159.1 263 53.2
Lalb_Chr07g0193301 Lupinus albus HOM05D005866 ORTHO05D007078 4.7e-37 159.1 241 41.1
Medtr4g015010 Medicago truncatula HOM05D005866 ORTHO05D007078 4.7e-37 159.1 252 50.4
Actinidia05342 Actinidia chinensis HOM05D005866 ORTHO05D007078 2.3e-36 156.8 197 57.4
arahy.Tifrunner.gnm1.ann1.QNAF0W Arachis hypogaea HOM05D005866 ORTHO05D007078 2.3e-36 156.8 257 42.0
Zm00001eb367320 Zea mays HOM05D005866 ORTHO05D007078 2.3e-36 156.8 260 45.4
arahy.Tifrunner.gnm1.ann1.T33YJ3 Arachis hypogaea HOM05D005866 ORTHO05D007078 4.0e-36 156.0 250 42.4
TPR.G5230 Trifolium pratense HOM05D005866 ORTHO05D007078 4.0e-36 156.0 252 49.6
arahy.Tifrunner.gnm1.ann1.F83RTD Arachis hypogaea HOM05D005866 ORTHO05D007078 1.5e-35 154.1 250 42.0
Glyma.03G077300 Glycine max HOM05D005866 ORTHO05D007078 2.6e-35 153.3 245 51.8
BcaC09g48006 Brassica carinata HOM05D005866 ORTHO05D007078 7.5e-35 151.8 207 44.0
Hund02698 Selenicereus undatus HOM05D005866 ORTHO05D007078 9.8e-35 151.4 278 37.1
Peaxi162Scf00009g01923 Petunia axillaris HOM05D005866 ORTHO05D007078 5.4e-33 145.6 250 45.6
Os01g0853000 Oryza sativa ssp. japonica HOM05D005866 ORTHO05D007078 1.6e-32 144.1 254 45.7
TAR633G2503 Trochodendron aralioides HOM05D005866 ORTHO05D007078 1.6e-32 144.1 130 60.0
arahy.Tifrunner.gnm1.ann1.6JA19R Arachis hypogaea HOM05D005866 ORTHO05D007078 3.3e-30 136.3 216 40.3
PSO339G5866 Papaver somniferum HOM05D005866 ORTHO05D007078 1.6e-29 134.0 190 55.3
EL10Ac6g13875 Beta vulgaris HOM05D005866 ORTHO05D007078 2.8e-26 123.2 131 52.7
Actinidia01119 Actinidia chinensis HOM05D005866 ORTHO05D007078 5.4e-25 119.0 83 72.3
Actinidia01118 Actinidia chinensis HOM05D005866 ORTHO05D007078 1.1e-22 111.3 83 72.3
ATR0618G104 Amborella trichopoda HOM05D005866 ORTHO05D007078 8.0e-21 105.1 145 42.1
Pp3c5_19930 Physcomitrium patens HOM05D005866 ORTHO05D007078 8.3e-18 95.1 209 31.1
AagrBONN_evm.TU.Sc2ySwM_117.2545 Anthoceros agrestis HOM05D005866 ORTHO05D007078 9.2e-17 91.7 234 29.5
Mapoly0004s0086 Marchantia polymorpha HOM05D005866 ORTHO05D007078 1.6e-16 90.9 205 30.7
Dinv37082 Davidia involucrata HOM05D005866 ORTHO05D007078 3.5e-16 89.7 99 51.5
SEGI_33363 Sequoiadendron giganteum HOM05D005866 ORTHO05D007078 8.6e-15 85.1 202 28.2
HanXRQChr10g0287001 Helianthus annuus HOM05D005866 ORTHO05D007078 3.3e-14 83.2 83 54.2
SEGI_17473 Sequoiadendron giganteum HOM05D005866 ORTHO05D007078 2.6e-11 73.6 181 26.5
Lalb_Chr03g0043011 Lupinus albus HOM05D005866 ORTHO05D007078 5.8e-11 72.4 83 49.4
Mapoly0010s0127 Marchantia polymorpha HOM05D005866 ORTHO05D007078 7.5e-11 72.0 244 25.8
SMO143G0029 Selaginella moellendorffii HOM05D001879 ORTHO05D007648 1.7e-10 70.9 205 25.4
SGA_v2.0_scaffold1443G53951 Striga asiatica HOM05D005866 ORTHO05D007078 2.2e-10 70.5 83 53.0
ATR0618G115 Amborella trichopoda HOM05D005866 ORTHO05D007078 8.3e-10 68.6 73 47.9
Pp3c20_9600 Physcomitrium patens HOM05D005866 ORTHO05D007078 1.7e-07 60.8 216 25.0
Pp3c23_6870 Physcomitrium patens HOM05D005866 ORTHO05D007078 3.3e-06 56.6 227 24.2
Ah.07g199780 Amaranthus hybridus HOM05D005866 ORTHO05D007078 4.3e-06 56.2 115 40.0


User provided reference genes

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