Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 2.3e-251 871.7 421 100.0
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 6.1e-220 767.3 419 87.8
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 2.7e-191 672.2 413 78.7
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 2.2e-185 652.5 423 76.6
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 9.9e-170 600.5 430 68.1
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 6.4e-169 597.8 415 70.1
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 8.3e-169 597.4 432 68.5
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 5.4e-168 594.7 423 67.8
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 1.7e-166 589.7 433 66.1
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 8.6e-166 587.4 426 68.8
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 8.6e-166 587.4 426 68.8
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 1.1e-165 587.0 424 68.2
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 1.9e-165 586.3 428 67.8
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 3.3e-165 585.5 431 66.1
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 5.6e-165 584.7 424 66.3
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 3.6e-164 582.0 428 67.5
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 4.7e-164 581.6 430 66.5
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 1.1e-163 580.5 423 66.9
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 1.1e-163 580.5 435 64.4
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 2.6e-162 575.9 433 66.7
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 1.3e-161 573.5 410 67.1
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 1.4e-160 570.1 434 63.6
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 1.4e-160 570.1 432 65.3
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 3.2e-160 568.9 424 66.0
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 3.2e-160 568.9 424 65.8
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 1.6e-159 566.6 433 63.7
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 2.7e-159 565.8 415 67.2
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 4.6e-159 565.1 446 64.6
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 4.6e-159 565.1 425 63.1
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 3.0e-158 562.4 422 63.7
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 3.9e-158 562.0 422 63.7
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 7.3e-157 557.8 425 65.2
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 9.6e-157 557.4 418 63.2
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 6.9e-155 551.2 383 70.2
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 6.9e-155 551.2 415 65.3
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 2.0e-154 549.7 431 64.3
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 1.7e-153 546.6 423 63.8
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 6.4e-153 544.7 520 56.0
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 1.1e-152 543.9 415 64.1
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 2.4e-152 542.7 431 63.6
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 3.2e-152 542.3 436 65.4
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 4.2e-152 542.0 432 61.3
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 9.3e-152 540.8 431 63.6
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 1.6e-151 540.0 435 63.2
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 3.5e-151 538.9 448 62.1
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 4.6e-151 538.5 435 62.3
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 6.0e-151 538.1 432 61.6
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 7.8e-151 537.7 387 65.9
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 2.3e-150 536.2 434 62.4
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 4.3e-149 531.9 432 60.4
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 5.6e-149 531.6 414 64.0
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 3.6e-148 528.9 432 60.0
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 8.1e-148 527.7 425 60.7
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 3.1e-147 525.8 385 67.5
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 5.3e-147 525.0 417 62.6
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 5.3e-147 525.0 417 62.6
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 1.5e-146 523.5 414 62.8
Eucgr.H00127 Eucalyptus grandis HOM05D006857 ORTHO05D008679 2.2e-145 519.6 391 66.5
Lj6g0000537 Lotus japonicus HOM05D006857 ORTHO05D008679 4.9e-145 518.5 432 60.0
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla HOM05D006857 ORTHO05D008679 6.4e-145 518.1 355 72.4
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 1.4e-144 516.9 427 61.4
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 2.4e-144 516.2 413 64.2
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 4.2e-144 515.4 419 60.6
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 2.7e-143 512.7 429 59.2
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 4.6e-143 511.9 411 63.7
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 3.9e-142 508.8 413 63.4
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 6.7e-142 508.1 429 59.4
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 1.3e-140 503.8 412 62.6
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 4.0e-139 498.8 422 60.4
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 2.2e-137 493.0 409 59.7
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 6.7e-134 481.5 422 57.1
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 5.6e-133 478.4 419 56.6
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 5.6e-133 478.4 412 59.2
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 7.4e-133 478.0 419 59.7
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 5.3e-131 471.9 415 57.3
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 2.6e-130 469.5 356 64.6
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 7.6e-130 468.0 406 58.1
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 1.1e-128 464.2 642 42.8
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 4.2e-128 462.2 377 61.8
MSTRG.4172 Avicennia marina HOM05D006857 ORTHO05D008679 3.9e-126 455.7 369 62.6
Phvul.007G231500 Phaseolus vulgaris HOM05D006857 ORTHO05D008679 6.7e-126 454.9 350 64.0
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 1.1e-125 454.1 403 58.3
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 9.7e-125 451.1 418 56.5
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 2.4e-123 446.4 406 56.4
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 2.4e-123 446.4 406 56.4
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 2.4e-123 446.4 406 55.9
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 3.1e-123 446.0 402 56.7
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 1.2e-122 444.1 423 54.6
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 1.0e-121 441.0 405 55.8
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 1.3e-121 440.7 406 55.4
Zm00001eb077400 Zea mays HOM05D006857 ORTHO05D008679 1.3e-121 440.7 402 54.7
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 3.8e-121 439.1 405 55.6
Dinv27112 Davidia involucrata HOM05D006857 ORTHO05D008679 1.7e-116 423.7 306 69.9
CDE02G1483 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 1.7e-113 413.7 421 50.8
TPR.G11804 Trifolium pratense HOM05D006857 ORTHO05D008679 1.4e-104 384.0 303 64.0
MBI10_g35430_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 8.0e-87 325.1 291 59.1
Pp3c15_24290 Physcomitrium patens HOM05D006857 ORTHO05D008679 1.8e-78 297.4 458 38.6
Mapoly0127s0023 Marchantia polymorpha HOM05D006857 ORTHO05D008679 3.1e-75 286.6 446 39.9
MBI10_g35433_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 9.5e-72 275.0 236 61.0
SHI00774 Sapria himalayana HOM05D006857 ORTHO05D008679 1.7e-65 254.2 274 51.5
BcaC08g44309 Brassica carinata HOM05D006857 ORTHO05D008679 3.1e-62 243.4 188 61.7
unitig_748.g8297 Utricularia gibba HOM05D006857 ORTHO05D008679 2.1e-55 220.7 198 54.5
unitig_748.g8298 Utricularia gibba HOM05D006857 ORTHO05D008679 3.4e-53 213.4 208 52.4
BcaC08g44310 Brassica carinata HOM05D006857 ORTHO05D008679 4.3e-48 196.4 208 51.4
CDE08G1596 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 3.6e-47 193.4 178 56.7
MBI10_g35434_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 1.4e-46 191.4 146 62.3
AagrBONN_evm.TU.Sc2ySwM_117.1189 Anthoceros agrestis HOM05D006857 ORTHO05D008679 3.9e-41 173.3 293 37.5
FvH4_5g26950 Fragaria vesca HOM05D006857 ORTHO05D008679 9.3e-35 152.1 113 66.4
FAN13G3085 Fragaria x ananassa HOM05D006857 ORTHO05D008679 2.7e-34 150.6 123 61.8
TPR.G25294 Trifolium pratense HOM05D006857 ORTHO05D008679 2.2e-28 131.0 110 61.8
SEGI_21065 Sequoiadendron giganteum HOM05D006857 ORTHO05D008679 3.0e-17 94.0 97 51.5
SHI00775 Sapria himalayana HOM05D000105 ORTHO05D000023 1.3e-15 88.6 103 42.7
MBI10_g35432_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 1.7e-12 78.2 73 53.4
MD13G1221100 Malus domestica HOM05D006857 ORTHO05D008679 3.8e-12 77.0 97 48.5
MCO09G143 Micromonas commoda HOM05D006857 ORTHO05D008679 7.9e-10 69.3 200 29.5
MCO07G483 Micromonas commoda HOM05D006857 ORTHO05D008679 3.3e-08 63.9 235 27.7
HanXRQChr11g0332551 Helianthus annuus HOM05D006857 ORTHO05D008679 6.3e-07 59.7 50 62.0
ATR0787G039 Amborella trichopoda HOM05D006857 ORTHO05D008679 4.1e-06 57.0 44 59.1


User provided reference genes

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