Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08543 Vaccinium macrocarpon HOM05D001518 ORTHO05D427078 5.1e-121 438.0 256 100.0
Duzib150G1195 Durio zibethinus HOM05D000059 ORTHO05D000528 1.0e-07 61.6 77 46.8
Rhsim01G0192100 Rhododendron simsii HOM05D000059 ORTHO05D000528 1.7e-07 60.8 77 48.1
Hund22026 Selenicereus undatus HOM05D000059 ORTHO05D000528 2.9e-07 60.1 83 41.0
Rhsim13G0220600 Rhododendron simsii HOM05D004275 ORTHO05D005720 5.0e-07 59.3 77 45.5
Gohir.A09G114000 Gossypium hirsutum HOM05D000059 ORTHO05D000528 6.5e-07 58.9 76 44.7
Peaxi162Scf00004g02626 Petunia axillaris HOM05D000059 ORTHO05D000528 6.5e-07 58.9 81 42.0
Thecc.09G234700 Theobroma cacao HOM05D000059 ORTHO05D000528 8.5e-07 58.5 77 44.2
DCAR_002075 Daucus carota HOM05D000059 ORTHO05D000528 1.1e-06 58.2 77 45.5
MSTRG.12466 Avicennia marina HOM05D000059 ORTHO05D000528 2.5e-06 57.0 77 45.5
COL.COLO4_06116 Corchorus olitorius HOM05D000059 ORTHO05D000528 2.5e-06 57.0 77 41.6
Oeu016679.1 Olea europaea HOM05D000059 ORTHO05D000528 2.5e-06 57.0 77 44.2
vmacro04151 Vaccinium macrocarpon HOM05D000059 ORTHO05D000528 2.5e-06 57.0 77 46.8
Ah.06g194100 Amaranthus hybridus HOM05D000059 ORTHO05D000528 3.2e-06 56.6 80 40.0
DCAR_024418 Daucus carota HOM05D000059 ORTHO05D000528 3.2e-06 56.6 77 44.2
Manes.14G003300 Manihot esculenta HOM05D000059 ORTHO05D000528 3.2e-06 56.6 77 44.2
Nitab4.5_0000023g0680 Nicotiana tabacum HOM05D000059 ORTHO05D000528 3.2e-06 56.6 77 44.2
Nitab4.5_0002786g0110 Nicotiana tabacum HOM05D000059 ORTHO05D000528 3.2e-06 56.6 77 44.2
CSS0019514 Camellia sinensis var. sinensis HOM05D001518 ORTHO05D002719 4.2e-06 56.2 47 68.1
CSS0031136 Camellia sinensis var. sinensis HOM05D001518 ORTHO05D002719 4.2e-06 56.2 47 68.1
ClCG03G013200 Citrullus lanatus HOM05D000059 ORTHO05D000528 4.2e-06 56.2 77 42.9
MELO3C015189.2 Cucumis melo HOM05D000059 ORTHO05D000528 4.2e-06 56.2 77 42.9
DCAR_029952 Daucus carota HOM05D000059 ORTHO05D000528 4.2e-06 56.2 77 42.9
Potri.009G052700 Populus trichocarpa HOM05D000059 ORTHO05D000528 4.2e-06 56.2 77 42.9
Sabra16G0155600 Salix brachista HOM05D000059 ORTHO05D000528 4.2e-06 56.2 77 42.9
Ciclev10014873m.g Citrus clementina HOM05D000059 ORTHO05D000528 5.5e-06 55.8 77 42.9
Haze_23144 Corylus avellana HOM05D000059 ORTHO05D000528 5.5e-06 55.8 82 40.2
CsaV3_1G042850 Cucumis sativus L. HOM05D000059 ORTHO05D000528 5.5e-06 55.8 77 41.6
Potri.001G257100 Populus trichocarpa HOM05D000059 ORTHO05D000528 5.5e-06 55.8 77 41.6
Sabra09G0038400 Salix brachista HOM05D000059 ORTHO05D000528 5.5e-06 55.8 77 41.6
CSS0007306 Camellia sinensis var. sinensis HOM05D000059 ORTHO05D000528 7.2e-06 55.5 77 42.9
Gohir.A09G113200 Gossypium hirsutum HOM05D001518 ORTHO05D002719 7.2e-06 55.5 47 63.8
Gohir.D09G109733 Gossypium hirsutum HOM05D001518 ORTHO05D002719 7.2e-06 55.5 47 63.8
Gohir.D09G109800 Gossypium hirsutum HOM05D001518 ORTHO05D002719 7.2e-06 55.5 47 63.8
Gorai.006G127400 Gossypium raimondii HOM05D001518 ORTHO05D002719 7.2e-06 55.5 47 63.8
Peaxi162Scf00032g00214 Petunia axillaris HOM05D000059 ORTHO05D000528 7.2e-06 55.5 77 42.9
Actinidia11674 Actinidia chinensis HOM05D001518 ORTHO05D002719 9.4e-06 55.1 47 66.0
Actinidia23977 Actinidia chinensis HOM05D001518 ORTHO05D002719 9.4e-06 55.1 47 66.0
Ciclev10010257m.g Citrus clementina HOM05D000059 ORTHO05D152342 9.4e-06 55.1 79 44.3
PGSC0003DMG400010704 Solanum tuberosum HOM05D000059 ORTHO05D000528 9.4e-06 55.1 77 42.9
unitig_62.g23878 Utricularia gibba HOM05D000059 ORTHO05D000528 9.4e-06 55.1 77 42.9


User provided reference genes

Program Settings