Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08530 Vaccinium macrocarpon HOM05D006230 ORTHO05D007598 5.9e-80 300.8 155 100.0
Actinidia35808 Actinidia chinensis HOM05D006230 ORTHO05D007598 1.2e-48 196.8 158 67.1
CSS0007771 Camellia sinensis var. sinensis HOM05D006230 ORTHO05D007598 6.0e-48 194.5 158 69.0
Actinidia20827 Actinidia chinensis HOM05D006230 ORTHO05D007598 7.8e-48 194.1 155 67.7
Dinv27088 Davidia involucrata HOM05D006230 ORTHO05D007598 7.3e-46 187.6 157 66.9
TAR636G3560 Trochodendron aralioides HOM05D006230 ORTHO05D007598 2.0e-43 179.5 154 64.3
Lsat_1_v5_gn_2_39681 Lactuca sativa HOM05D006230 ORTHO05D007598 5.8e-43 177.9 157 63.7
Hma1.2p1_0112F.1_g054490 Hydrangea macrophylla HOM05D006230 ORTHO05D007598 2.9e-42 175.6 159 62.9
Atru.chr4.1981 Acer truncatum HOM05D006230 ORTHO05D007598 3.8e-42 175.3 141 66.0
TWI73G0434 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 1.4e-41 173.3 128 69.5
HanXRQChr14g0434851 Helianthus annuus HOM05D006230 ORTHO05D007598 1.9e-41 172.9 119 73.9
PGSC0003DMG400017161 Solanum tuberosum HOM05D006230 ORTHO05D007598 4.2e-41 171.8 155 63.2
CAN.G220.45 Capsicum annuum HOM05D006230 ORTHO05D007598 9.3e-41 170.6 119 70.6
Thecc.04G260000 Theobroma cacao HOM05D006230 ORTHO05D007598 1.2e-40 170.2 142 66.2
PSO063G4949 Papaver somniferum HOM05D006230 ORTHO05D007598 2.7e-40 169.1 153 62.1
Eucgr.H02995 Eucalyptus grandis HOM05D006230 ORTHO05D007598 3.5e-40 168.7 154 63.0
Solyc09g090410.3 Solanum lycopersicum HOM05D006230 ORTHO05D007598 3.5e-40 168.7 155 61.3
Sopen09g033320 Solanum pennellii HOM05D006230 ORTHO05D007598 3.5e-40 168.7 155 61.3
TWI53G0221 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 4.6e-40 168.3 128 68.8
Cfa014753 Carpinus fangiana HOM05D006230 ORTHO05D007598 7.8e-40 167.5 151 62.3
Duzib212G0996 Durio zibethinus HOM05D006230 ORTHO05D007598 7.8e-40 167.5 143 63.6
PSO017G6779 Papaver somniferum HOM05D006230 ORTHO05D007598 1.0e-39 167.2 153 62.1
Cpa.g.sc44.25 Carica papaya HOM05D006230 ORTHO05D007598 1.3e-39 166.8 121 71.9
Potri.010G068500 Populus trichocarpa HOM05D006230 ORTHO05D007598 1.3e-39 166.8 117 76.9
Gohir.A02G041200 Gossypium hirsutum HOM05D006230 ORTHO05D007598 1.7e-39 166.4 143 65.7
Duzib151G0304 Durio zibethinus HOM05D006230 ORTHO05D007598 3.0e-39 165.6 143 63.6
Oeu023312.1 Olea europaea HOM05D006230 ORTHO05D007598 3.0e-39 165.6 133 67.7
Gorai.005G052000 Gossypium raimondii HOM05D006230 ORTHO05D007598 3.9e-39 165.2 143 65.7
PGR004G2031 Punica granatum HOM05D006230 ORTHO05D007598 3.9e-39 165.2 152 61.2
Sed0003219 Sechium edule HOM05D006230 ORTHO05D007598 3.9e-39 165.2 131 68.7
GSVIVG01027870001 Vitis vinifera HOM05D006230 ORTHO05D007598 3.9e-39 165.2 119 70.6
Haze_11428 Corylus avellana HOM05D006230 ORTHO05D007598 5.1e-39 164.9 151 60.9
Sabra10G0038500 Salix brachista HOM05D006230 ORTHO05D007598 6.6e-39 164.5 154 63.6
COL.COLO4_15930 Corchorus olitorius HOM05D006230 ORTHO05D007598 1.5e-38 163.3 143 63.6
Nitab4.5_0001425g0090 Nicotiana tabacum HOM05D006230 ORTHO05D007598 1.5e-38 163.3 156 60.3
Sed0015876 Sechium edule HOM05D006230 ORTHO05D007598 1.5e-38 163.3 122 69.7
AUR62015538 Chenopodium quinoa HOM05D006230 ORTHO05D007598 1.9e-38 162.9 116 71.6
Gorai.011G177300 Gossypium raimondii HOM05D006230 ORTHO05D007598 1.9e-38 162.9 142 64.8
EL10Ac3g04971 Beta vulgaris HOM05D006230 ORTHO05D007598 2.5e-38 162.5 119 71.4
Gohir.D02G047000 Gossypium hirsutum HOM05D006230 ORTHO05D007598 3.3e-38 162.2 143 65.0
Manes.15G043800 Manihot esculenta HOM05D006230 ORTHO05D007598 3.3e-38 162.2 153 59.5
Potri.008G169800 Populus trichocarpa HOM05D006230 ORTHO05D007598 3.3e-38 162.2 135 66.7
Rhsim04G0174900 Rhododendron simsii HOM05D006230 ORTHO05D007598 4.3e-38 161.8 155 62.6
Gohir.D10G157800 Gossypium hirsutum HOM05D006230 ORTHO05D007598 5.6e-38 161.4 142 64.1
Ciclev10006136m.g Citrus clementina HOM05D006230 ORTHO05D007598 9.6e-38 160.6 157 59.2
Lalb_Chr01g0020881 Lupinus albus HOM05D006230 ORTHO05D007598 9.6e-38 160.6 116 71.6
Peaxi162Scf00602g00421 Petunia axillaris HOM05D006230 ORTHO05D007598 9.6e-38 160.6 155 60.6
CiPaw.02G108600 Carya illinoinensis HOM05D006230 ORTHO05D007598 1.3e-37 160.2 160 60.0
MELO3C006400.2 Cucumis melo HOM05D006230 ORTHO05D007598 1.3e-37 160.2 153 60.8
AT2G33450 Arabidopsis thaliana HOM05D006230 ORTHO05D007598 1.6e-37 159.8 116 74.1
ClCG05G004160 Citrullus lanatus HOM05D006230 ORTHO05D007598 1.6e-37 159.8 123 69.1
CsaV3_3G011880 Cucumis sativus L. HOM05D006230 ORTHO05D007598 2.1e-37 159.5 123 70.7
Nitab4.5_0006936g0040 Nicotiana tabacum HOM05D006230 ORTHO05D007598 2.1e-37 159.5 156 60.3
Medtr1g041320 Medicago truncatula HOM05D006230 ORTHO05D007598 2.8e-37 159.1 121 71.1
Sc13g0005900 Simmondsia chinensis HOM05D006230 ORTHO05D007598 2.8e-37 159.1 117 70.1
THA.LOC104801077 Tarenaya hassleriana HOM05D006230 ORTHO05D007598 2.8e-37 159.1 134 67.9
Carub.0001s0365 Capsella rubella HOM05D006230 ORTHO05D007598 3.6e-37 158.7 140 65.7
AL4G29120 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 4.8e-37 158.3 133 67.7
Carub.0004s1508 Capsella rubella HOM05D006230 ORTHO05D007598 4.8e-37 158.3 130 68.5
Psat6g103800 Pisum sativum HOM05D006230 ORTHO05D007598 4.8e-37 158.3 121 70.2
CARHR127460 Cardamine hirsuta HOM05D006230 ORTHO05D007598 8.1e-37 157.5 130 68.5
Ca_05177_v3 Cicer arietinum L. HOM05D006230 ORTHO05D007598 8.1e-37 157.5 141 63.1
Migut.G00496 Erythranthe guttata HOM05D006230 ORTHO05D007598 1.1e-36 157.1 131 64.9
Sp1g03290 Schrenkiella parvula HOM05D006230 ORTHO05D007598 1.1e-36 157.1 157 61.1
CANSAT78G0232 Cannabis sativa HOM05D006230 ORTHO05D007598 1.4e-36 156.8 139 64.0
Glyma.10G002600 Glycine max HOM05D006230 ORTHO05D007598 1.4e-36 156.8 117 70.9
ATR0736G074 Amborella trichopoda HOM05D006230 ORTHO05D007598 2.4e-36 156.0 138 64.5
CANSAT78G0887 Cannabis sativa HOM05D006230 ORTHO05D007598 2.4e-36 156.0 136 64.7
Gohir.A10G109400 Gossypium hirsutum HOM05D006230 ORTHO05D007598 2.4e-36 156.0 142 62.7
Cc03_g05900 Coffea canephora HOM05D006230 ORTHO05D007598 3.1e-36 155.6 158 57.6
QL06p019992 Quercus lobata HOM05D006230 ORTHO05D007598 4.0e-36 155.2 126 69.8
DCAR_002306 Daucus carota HOM05D006230 ORTHO05D007598 5.3e-36 154.8 156 59.0
Aqoxy2G03714 Aquilegia oxysepala HOM05D006230 ORTHO05D007598 6.9e-36 154.5 157 61.8
Lj6g0026311 Lotus japonicus HOM05D006230 ORTHO05D007598 6.9e-36 154.5 127 68.5
Lalb_Chr03g0037521 Lupinus albus HOM05D006230 ORTHO05D007598 6.9e-36 154.5 118 69.5
Aa31LG5G3840 Aethionema arabicum HOM05D006230 ORTHO05D007598 9.0e-36 154.1 133 66.9
Thhalv10017390m.g Eutrema salsugineum HOM05D006230 ORTHO05D007598 1.2e-35 153.7 119 71.4
Prupe.1G045100 Prunus persica HOM05D006230 ORTHO05D007598 1.2e-35 153.7 155 58.1
BolC4t27775H Brassica oleracea HOM05D006230 ORTHO05D007598 1.5e-35 153.3 123 71.5
BraA04t18078Z Brassica rapa HOM05D006230 ORTHO05D007598 1.5e-35 153.3 123 71.5
FAN12G2171 Fragaria x ananassa HOM05D006230 ORTHO05D007598 1.5e-35 153.3 139 63.3
Sp4g15790 Schrenkiella parvula HOM05D006230 ORTHO05D007598 1.5e-35 153.3 137 66.4
BcaB06g28689 Brassica carinata HOM05D006230 ORTHO05D007598 2.0e-35 152.9 123 71.5
Phvul.007G278700 Phaseolus vulgaris HOM05D006230 ORTHO05D007598 2.0e-35 152.9 132 66.7
ECA234G3973 Erigeron canadensis HOM05D006230 ORTHO05D007598 3.4e-35 152.1 154 59.1
AL1G14110 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 4.5e-35 151.8 122 70.5
BcaC02g07821 Brassica carinata HOM05D006230 ORTHO05D007598 4.5e-35 151.8 120 71.7
RcHm_v2.0_Chr4g0394691 Rosa chinensis HOM05D006230 ORTHO05D007598 5.8e-35 151.4 121 65.3
TPR.G32792 Trifolium pratense HOM05D006230 ORTHO05D007598 5.8e-35 151.4 122 68.0
A04p25750 Brassica napus HOM05D006230 ORTHO05D007598 7.6e-35 151.0 123 70.7
C04p62980 Brassica napus HOM05D006230 ORTHO05D007598 1.3e-34 150.2 120 71.7
FvH4_4g04200 Fragaria vesca HOM05D006230 ORTHO05D007598 1.7e-34 149.8 121 64.5
MD16G1223800 Malus domestica HOM05D006230 ORTHO05D007598 2.9e-34 149.1 152 57.2
Os05g0101400 Oryza sativa ssp. japonica HOM05D006230 ORTHO05D007598 2.9e-34 149.1 133 62.4
Oeu059405.1 Olea europaea HOM05D006230 ORTHO05D007598 3.8e-34 148.7 169 53.3
SGA_v2.0_scaffold67G22731 Striga asiatica HOM05D006230 ORTHO05D007598 8.4e-34 147.5 117 66.7
BcaB02g10562 Brassica carinata HOM05D006230 ORTHO05D007598 1.9e-33 146.4 150 60.0
FAN17G1889 Fragaria x ananassa HOM05D006230 ORTHO05D007598 1.9e-33 146.4 155 55.5
BcaC02g11431 Brassica carinata HOM05D006230 ORTHO05D007598 2.4e-33 146.0 145 63.4
C04p15650 Brassica napus HOM05D006230 ORTHO05D007598 2.4e-33 146.0 145 63.4
unitig_32.g10851 Utricularia gibba HOM05D006230 ORTHO05D007598 2.4e-33 146.0 122 64.8
MD13G1218400 Malus domestica HOM05D006230 ORTHO05D007598 4.2e-33 145.2 124 63.7
Hund11917 Selenicereus undatus HOM05D006230 ORTHO05D007598 5.4e-33 144.8 149 53.0
CDE11G0022 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 7.1e-33 144.4 153 56.9
Zm00001eb222850 Zea mays HOM05D006230 ORTHO05D007598 9.3e-33 144.1 121 63.6
CDE05G0971 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 6.0e-32 141.4 82 86.6
HPP92_012809 Vanilla planifolia HOM05D006230 ORTHO05D007598 1.3e-31 140.2 131 58.8
SalBow3G4585 Salvia bowleyana HOM05D006230 ORTHO05D007598 8.7e-31 137.5 136 56.6
BolC4t23134H Brassica oleracea HOM05D006230 ORTHO05D007598 1.1e-30 137.1 146 61.6
Zm00001eb047510 Zea mays HOM05D006230 ORTHO05D007598 1.1e-30 137.1 122 63.1
arahy.Tifrunner.gnm1.ann1.ADZ0J4 Arachis hypogaea HOM05D006230 ORTHO05D007598 1.5e-30 136.7 78 85.9
Thecc.10G124200 Theobroma cacao HOM05D006230 ORTHO05D007598 1.1e-28 130.6 78 82.1
SEGI_13554 Sequoiadendron giganteum HOM05D006230 ORTHO05D007598 3.4e-27 125.6 78 79.5
RcHm_v2.0_Chr4g0394651 Rosa chinensis HOM05D006230 ORTHO05D007598 4.5e-27 125.2 152 51.3
MD00G1118000 Malus domestica HOM05D006230 ORTHO05D007598 3.8e-26 122.1 75 78.7
Prupe.8G083300 Prunus persica HOM05D006230 ORTHO05D007598 1.1e-25 120.6 78 76.9
Mapoly0087s0077 Marchantia polymorpha HOM05D006230 ORTHO05D007598 5.1e-23 111.7 120 54.2
AagrBONN_evm.TU.Sc2ySwM_228.3795 Anthoceros agrestis HOM05D006230 ORTHO05D007598 1.5e-22 110.2 107 53.3
Ah.04g155450 Amaranthus hybridus HOM05D000071 ORTHO05D007598 9.6e-22 107.5 87 66.7
Pp3c6_1140 Physcomitrium patens HOM05D006230 ORTHO05D007598 1.6e-21 106.7 125 52.8
Pp3c5_28500 Physcomitrium patens HOM05D006230 ORTHO05D007598 3.7e-21 105.5 125 52.0
Duzib052G0467 Durio zibethinus HOM05D006230 ORTHO05D007598 4.0e-20 102.1 115 50.4
SMO131G0001 Selaginella moellendorffii HOM05D006230 ORTHO05D007598 5.3e-20 101.7 75 62.7
CBR_g23072 Chara braunii HOM05D006230 ORTHO05D007598 2.0e-19 99.8 78 64.1
Cre06.g265800 Chlamydomonas reinhardtii HOM05D006230 ORTHO05D007598 1.4e-17 93.6 92 51.1
MCO07G061 Micromonas commoda HOM05D006230 ORTHO05D007598 3.5e-16 89.0 128 41.4
VMungo0684G0001 Vigna mungo HOM05D006230 ORTHO05D007598 1.9e-09 66.6 65 50.8
Nn3g19733 Nelumbo nucifera HOM05D006230 ORTHO05D007598 1.0e-07 60.8 35 88.6


User provided reference genes

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