Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08382 Vaccinium macrocarpon HOM05D000522 ORTHO05D004380 7.0e-170 600.5 301 100.0
vmacro08116 Vaccinium macrocarpon HOM05D000522 ORTHO05D004380 5.3e-85 318.5 391 50.6
vmacro06197 Vaccinium macrocarpon HOM05D000522 ORTHO05D004380 7.1e-45 185.3 156 65.4
vmacro06199 Vaccinium macrocarpon HOM05D000522 ORTHO05D004380 8.1e-41 171.8 151 66.9
Rhsim03G0244700 Rhododendron simsii HOM05D000522 ORTHO05D004380 1.6e-33 147.5 138 63.0
Cfa003289 Carpinus fangiana HOM05D000522 ORTHO05D004380 2.2e-30 137.1 138 59.4
Actinidia07420 Actinidia chinensis HOM05D000522 ORTHO05D004380 3.8e-30 136.3 138 58.7
Dinv41579 Davidia involucrata HOM05D000993 ORTHO05D004380 3.8e-30 136.3 138 60.1
Haze_25684 Corylus avellana HOM05D000522 ORTHO05D004380 1.4e-29 134.4 138 58.0
CiPaw.04G167000 Carya illinoinensis HOM05D000522 ORTHO05D004380 3.2e-29 133.3 138 57.2
vmacro11394 Vaccinium macrocarpon HOM05D000522 ORTHO05D004380 4.2e-29 132.9 117 66.7
CSS0032661 Camellia sinensis var. sinensis HOM05D000522 ORTHO05D004380 1.2e-28 131.3 138 58.0
QL02p086017 Quercus lobata HOM05D000522 ORTHO05D004380 2.1e-28 130.6 138 56.5
Lj7A644G12 Lonicera japonica HOM05D000522 ORTHO05D004380 7.8e-28 128.6 138 55.8
Actinidia20339 Actinidia chinensis HOM05D000522 ORTHO05D004380 1.0e-27 128.3 138 57.2
CSS0022610 Camellia sinensis var. sinensis HOM05D000522 ORTHO05D004380 1.7e-27 127.5 138 56.5
COL.COLO4_34881 Corchorus olitorius HOM05D000522 ORTHO05D004380 2.3e-27 127.1 138 55.1
Duzib187G0776 Durio zibethinus HOM05D000522 ORTHO05D004380 5.1e-27 125.9 138 55.1
Lj4g0021382 Lotus japonicus HOM05D000522 ORTHO05D004380 8.7e-27 125.2 138 54.3
Gohir.D07G004100 Gossypium hirsutum HOM05D000522 ORTHO05D004380 1.5e-26 124.4 138 53.6
Gorai.001G003700 Gossypium raimondii HOM05D000522 ORTHO05D004380 1.5e-26 124.4 138 53.6
Glyma.05G232600 Glycine max HOM05D000522 ORTHO05D004380 1.9e-26 124.0 138 54.3
Gohir.A07G003600 Gossypium hirsutum HOM05D000522 ORTHO05D004380 1.9e-26 124.0 138 54.3
Glyma.08G040000 Glycine max HOM05D000522 ORTHO05D004380 2.5e-26 123.6 138 53.6
Gohir.D13G202100 Gossypium hirsutum HOM05D000522 ORTHO05D004380 3.3e-26 123.2 138 52.2
Gorai.013G231000 Gossypium raimondii HOM05D000522 ORTHO05D004380 3.3e-26 123.2 138 52.2
TWI63G0481 Tripterygium wilfordii HOM05D000522 ORTHO05D004380 3.3e-26 123.2 138 52.9
CsaV3_2G002430 Cucumis sativus L. HOM05D000522 ORTHO05D004380 4.3e-26 122.9 138 54.3
MELO3C004545.2 Cucumis melo HOM05D000522 ORTHO05D004380 5.6e-26 122.5 138 54.3
AUR62011027 Chenopodium quinoa HOM05D000522 ORTHO05D004380 7.3e-26 122.1 138 51.4
GSVIVG01015428001 Vitis vinifera HOM05D000522 ORTHO05D004380 7.3e-26 122.1 138 55.8
Medtr8g103840 Medicago truncatula HOM05D000522 ORTHO05D004380 9.6e-26 121.7 138 53.6
Phvul.002G314900 Phaseolus vulgaris HOM05D000522 ORTHO05D004380 9.6e-26 121.7 138 53.6
Gohir.A13G196800 Gossypium hirsutum HOM05D000522 ORTHO05D004380 1.3e-25 121.3 138 51.4
Thecc.09G114500 Theobroma cacao HOM05D000522 ORTHO05D004380 1.3e-25 121.3 138 53.6
TPR.G21700 Trifolium pratense HOM05D000522 ORTHO05D004380 2.1e-25 120.6 138 52.2
Duzib150G0749 Durio zibethinus HOM05D000522 ORTHO05D004380 2.8e-25 120.2 138 52.2
ECA236G2754 Erigeron canadensis HOM05D000522 ORTHO05D004380 2.8e-25 120.2 138 52.2
arahy.Tifrunner.gnm1.ann1.E6IMKI Arachis hypogaea HOM05D000522 ORTHO05D004380 3.6e-25 119.8 139 51.8
arahy.Tifrunner.gnm1.ann1.R702JB Arachis hypogaea HOM05D000522 ORTHO05D004380 3.6e-25 119.8 139 51.8
Hund09185 Selenicereus undatus HOM05D000522 ORTHO05D004380 3.6e-25 119.8 138 53.6
Potri.006G155700 Populus trichocarpa HOM05D000522 ORTHO05D004380 8.1e-25 118.6 138 51.4
Potri.006G156350 Populus trichocarpa HOM05D000522 ORTHO05D004380 8.1e-25 118.6 138 51.4
SalBow1G3152 Salvia bowleyana HOM05D000522 ORTHO05D004380 8.1e-25 118.6 138 52.2
Sed0002571 Sechium edule HOM05D000522 ORTHO05D004380 8.1e-25 118.6 139 51.1
CANSAT56G3220 Cannabis sativa HOM05D000522 ORTHO05D004380 1.1e-24 118.2 138 51.4
CANSAT56G3667 Cannabis sativa HOM05D000522 ORTHO05D004380 1.1e-24 118.2 138 51.4
Duzib168G0832 Durio zibethinus HOM05D000522 ORTHO05D004380 1.1e-24 118.2 138 52.2
VMungo0251G1337 Vigna mungo HOM05D000522 ORTHO05D004380 1.1e-24 118.2 138 51.4
ClCG11G002610 Citrullus lanatus HOM05D000522 ORTHO05D004380 1.4e-24 117.9 138 51.4
ECA234G1779 Erigeron canadensis HOM05D000522 ORTHO05D004380 1.4e-24 117.9 138 52.2
Cpa.g.sc23.137 Carica papaya HOM05D000522 ORTHO05D004380 1.8e-24 117.5 138 50.7
Lsat_1_v5_gn_5_100220 Lactuca sativa HOM05D000522 ORTHO05D004380 1.8e-24 117.5 138 52.2
HanXRQChr05g0138321 Helianthus annuus HOM05D000522 ORTHO05D004380 2.4e-24 117.1 138 50.7
Psat7g014120 Pisum sativum HOM05D000522 ORTHO05D004380 2.4e-24 117.1 138 51.4
AUR62033399 Chenopodium quinoa HOM05D000522 ORTHO05D004380 3.1e-24 116.7 157 48.4
Ca_17345_v3 Cicer arietinum L. HOM05D000522 ORTHO05D004380 3.1e-24 116.7 137 52.6
HanXRQChr10g0317741 Helianthus annuus HOM05D000522 ORTHO05D004380 3.1e-24 116.7 138 52.2
Lalb_Chr05g0222651 Lupinus albus HOM05D000522 ORTHO05D004380 3.1e-24 116.7 138 50.7
Manes.03G069100 Manihot esculenta HOM05D000522 ORTHO05D004380 3.1e-24 116.7 138 52.2
Sc08g0007180 Simmondsia chinensis HOM05D000522 ORTHO05D004380 3.1e-24 116.7 138 50.7
vmacro06198 Vaccinium macrocarpon HOM05D000522 ORTHO05D004380 3.1e-24 116.7 122 58.2
Thhalv10025298m.g Eutrema salsugineum HOM05D000522 ORTHO05D004380 4.0e-24 116.3 138 52.9
Sed0015283 Sechium edule HOM05D000522 ORTHO05D004380 5.3e-24 115.9 138 52.2
Ciclev10008327m.g Citrus clementina HOM05D000522 ORTHO05D004380 6.9e-24 115.5 138 52.2
Migut.K00465 Erythranthe guttata HOM05D000522 ORTHO05D004380 6.9e-24 115.5 136 50.7
Ah.09g227710 Amaranthus hybridus HOM05D000522 ORTHO05D004380 9.0e-24 115.2 138 50.0
Cc06_g09360 Coffea canephora HOM05D000522 ORTHO05D004380 9.0e-24 115.2 138 51.4
Lalb_Chr16g0387971 Lupinus albus HOM05D000522 ORTHO05D004380 9.0e-24 115.2 138 50.0
Atru.chr7.1299 Acer truncatum HOM05D000522 ORTHO05D004380 1.2e-23 114.8 138 51.4
Sabra06G0123500 Salix brachista HOM05D000522 ORTHO05D004380 1.2e-23 114.8 138 50.0
PGR102G1361 Punica granatum HOM05D000522 ORTHO05D004380 1.5e-23 114.4 140 51.4
EL10Ac8g18536 Beta vulgaris HOM05D000522 ORTHO05D004380 2.0e-23 114.0 138 49.3
Aqoxy7G01827 Aquilegia oxysepala HOM05D000522 ORTHO05D004380 2.6e-23 113.6 138 48.6
DCAR_012089 Daucus carota HOM05D000522 ORTHO05D004380 2.6e-23 113.6 138 48.6
AT4G13360 Arabidopsis thaliana HOM05D000522 ORTHO05D004380 3.4e-23 113.2 138 50.7
MSTRG.26353 Avicennia marina HOM05D000522 ORTHO05D004380 5.8e-23 112.5 138 48.6
Eucgr.C01076 Eucalyptus grandis HOM05D000522 ORTHO05D004380 5.8e-23 112.5 138 50.7
A03p43630 Brassica napus HOM05D000522 ORTHO05D004380 7.6e-23 112.1 138 47.8
Carub.0007s2921 Capsella rubella HOM05D000522 ORTHO05D004380 7.6e-23 112.1 138 51.4
FAN23G2543 Fragaria x ananassa HOM05D005850 ORTHO05D007405 7.6e-23 112.1 138 50.0
FAN28G2217 Fragaria x ananassa HOM05D000522 ORTHO05D004380 7.6e-23 112.1 138 50.0
ATR0037G022 Amborella trichopoda HOM05D000522 ORTHO05D004380 9.9e-23 111.7 138 49.3
FAN26G0510 Fragaria x ananassa HOM05D005850 ORTHO05D007405 9.9e-23 111.7 138 49.3
FAN26G3074 Fragaria x ananassa HOM05D005850 ORTHO05D007405 9.9e-23 111.7 138 49.3
BcaB03g16093 Brassica carinata HOM05D000522 ORTHO05D004380 1.3e-22 111.3 138 50.7
CARHR218930 Cardamine hirsuta HOM05D000522 ORTHO05D004380 1.3e-22 111.3 138 49.3
MBI04_g25412_MAGBIO Magnolia biondii HOM05D000522 ORTHO05D004380 1.3e-22 111.3 138 50.7
Psat7g012360 Pisum sativum HOM05D000522 ORTHO05D004380 1.3e-22 111.3 138 49.3
Sp7g10940 Schrenkiella parvula HOM05D000522 ORTHO05D004380 1.3e-22 111.3 138 50.0
FvH4_1g05350 Fragaria vesca HOM05D000522 ORTHO05D004380 1.7e-22 110.9 138 50.0
FAN19G1578 Fragaria x ananassa HOM05D005850 ORTHO05D007405 1.7e-22 110.9 138 50.0
BraA03t13500Z Brassica rapa HOM05D000522 ORTHO05D004380 2.2e-22 110.5 138 47.8
Sp3g22170 Schrenkiella parvula HOM05D000522 ORTHO05D004380 2.2e-22 110.5 138 47.8
Nn8g39261 Nelumbo nucifera HOM05D000522 ORTHO05D004380 2.9e-22 110.2 138 48.6
Prupe.7G227300 Prunus persica HOM05D000522 ORTHO05D004380 2.9e-22 110.2 139 48.9
SGA_v2.0_scaffold183G39892 Striga asiatica HOM05D000522 ORTHO05D004380 2.9e-22 110.2 143 47.6
vmacro11392 Vaccinium macrocarpon HOM05D000522 ORTHO05D004380 2.9e-22 110.2 120 59.2
Nitab4.5_0002705g0010 Nicotiana tabacum HOM05D000522 ORTHO05D004380 3.8e-22 109.8 138 49.3
RcHm_v2.0_Chr2g0091031 Rosa chinensis HOM05D000522 ORTHO05D004380 3.8e-22 109.8 138 50.0
AL3G39830 Arabidopsis lyrata HOM05D000522 ORTHO05D004380 4.9e-22 109.4 138 47.1
AL9U10300 Arabidopsis lyrata HOM05D000522 ORTHO05D004380 4.9e-22 109.4 138 50.0
BcaC01g03316 Brassica carinata HOM05D000522 ORTHO05D004380 4.9e-22 109.4 138 46.4
CARHR100460 Cardamine hirsuta HOM05D000522 ORTHO05D004380 4.9e-22 109.4 138 48.6
AUR62011039 Chenopodium quinoa HOM05D000522 ORTHO05D004380 4.9e-22 109.4 138 48.6
MD15G1189500 Malus domestica HOM05D000522 ORTHO05D004380 4.9e-22 109.4 137 50.4
THA.LOC104808747 Tarenaya hassleriana HOM05D000522 ORTHO05D004380 4.9e-22 109.4 137 49.6
A04p08740 Brassica napus HOM05D000522 ORTHO05D004380 6.4e-22 109.0 138 50.0
BraA04t16571Z Brassica rapa HOM05D000522 ORTHO05D004380 6.4e-22 109.0 138 50.0
CAN.G32.1 Capsicum annuum HOM05D000522 ORTHO05D004380 6.4e-22 109.0 138 48.6
HanXRQChr13g0424731 Helianthus annuus HOM05D000522 ORTHO05D004380 6.4e-22 109.0 139 51.1
Nn2g11819 Nelumbo nucifera HOM05D000522 ORTHO05D004380 6.4e-22 109.0 138 48.6
AUR62033413 Chenopodium quinoa HOM05D000522 ORTHO05D004380 8.4e-22 108.6 138 47.8
Thhalv10002535m.g Eutrema salsugineum HOM05D000522 ORTHO05D004380 8.4e-22 108.6 138 48.6
Nitab4.5_0008625g0010 Nicotiana tabacum HOM05D000522 ORTHO05D004380 1.1e-21 108.2 138 49.3
Sopen05g015250 Solanum pennellii HOM05D000522 ORTHO05D004380 1.1e-21 108.2 138 48.6
C03p53740 Brassica napus HOM05D000522 ORTHO05D004380 1.4e-21 107.8 138 46.4
BolC3t17634H Brassica oleracea HOM05D000522 ORTHO05D004380 1.4e-21 107.8 138 46.4
Peaxi162Scf00552g00512 Petunia axillaris HOM05D000522 ORTHO05D004380 1.9e-21 107.5 138 46.4
Hund26120 Selenicereus undatus HOM05D000522 ORTHO05D004380 1.9e-21 107.5 138 49.3
Aa31LG9G4380 Aethionema arabicum HOM05D000522 ORTHO05D004380 2.4e-21 107.1 137 48.9
BcaC02g09431 Brassica carinata HOM05D000522 ORTHO05D004380 2.4e-21 107.1 138 49.3
BolC4t25830H Brassica oleracea HOM05D000522 ORTHO05D004380 2.4e-21 107.1 138 49.3
MD02G1056500 Malus domestica HOM05D000522 ORTHO05D004380 2.4e-21 107.1 137 48.9
Peaxi162Scf00560g00617 Petunia axillaris HOM05D000522 ORTHO05D004380 2.4e-21 107.1 138 49.3
Lsat_1_v5_gn_8_94761 Lactuca sativa HOM05D000522 ORTHO05D004380 3.2e-21 106.7 138 47.1
Solyc05g018417.1 Solanum lycopersicum HOM05D000522 ORTHO05D004380 4.2e-21 106.3 138 47.8
unitig_46.g18395 Utricularia gibba HOM05D000522 ORTHO05D004380 5.4e-21 105.9 138 45.7
C04p42550 Brassica napus HOM05D000522 ORTHO05D004380 9.3e-21 105.1 138 48.6
Solyc05g018410.3 Solanum lycopersicum HOM05D000522 ORTHO05D004380 9.3e-21 105.1 138 47.8
AT3G24360 Arabidopsis thaliana HOM05D000522 ORTHO05D004380 1.2e-20 104.8 137 46.0
Carub.0003s2470 Capsella rubella HOM05D000522 ORTHO05D004380 2.1e-20 104.0 138 44.9
BcaB03g14587 Brassica carinata HOM05D000522 ORTHO05D004380 2.7e-20 103.6 138 44.9
Aa31LG8G11100 Aethionema arabicum HOM05D000522 ORTHO05D004380 3.5e-20 103.2 138 43.5
Oeu058085.3 Olea europaea HOM05D000522 ORTHO05D004380 3.5e-20 103.2 216 38.0
Nitab4.5_0008529g0010 Nicotiana tabacum HOM05D000522 ORTHO05D004380 6.0e-20 102.4 138 46.4
Sopen07g011860 Solanum pennellii HOM05D000522 ORTHO05D004380 6.0e-20 102.4 139 45.3
HanXRQChr10g0317641 Helianthus annuus HOM05D000522 ORTHO05D004380 7.9e-20 102.1 115 52.2
Eucgr.C04134 Eucalyptus grandis HOM05D000522 ORTHO05D004380 1.8e-19 100.9 137 45.3
Nitab4.5_0002363g0030 Nicotiana tabacum HOM05D000522 ORTHO05D004380 2.3e-19 100.5 138 45.7
CAN.G300.3 Capsicum annuum HOM05D000522 ORTHO05D004380 3.0e-19 100.1 138 46.4
PSO210G0429 Papaver somniferum HOM05D000522 ORTHO05D004380 6.7e-19 99.0 137 47.4
Lj7C643G7 Lonicera japonica HOM05D000522 ORTHO05D004380 1.5e-18 97.8 138 44.9
AUR62033410 Chenopodium quinoa HOM05D000522 ORTHO05D004380 1.9e-18 97.4 129 46.5
Aqoxy7G03774 Aquilegia oxysepala HOM05D000522 ORTHO05D004380 4.3e-18 96.3 136 42.6
TAR383G0974 Trochodendron aralioides HOM05D000522 ORTHO05D004380 4.3e-18 96.3 138 46.4
Os06g0594100 Oryza sativa ssp. japonica HOM05D000522 ORTHO05D004380 5.6e-18 95.9 137 43.8
PSO063G3875 Papaver somniferum HOM05D000522 ORTHO05D004380 5.6e-18 95.9 138 45.7
Zm00001eb385980 Zea mays HOM05D000522 ORTHO05D004380 7.4e-18 95.5 137 43.1
HPP92_006445 Vanilla planifolia HOM05D000522 ORTHO05D004380 2.8e-17 93.6 137 43.8
CDE02G2108 Ceratophyllum demersum HOM05D000522 ORTHO05D004380 6.2e-17 92.4 140 43.6
PSO782G3947 Papaver somniferum HOM05D000522 ORTHO05D004380 1.4e-16 91.3 138 43.5
Rhsim03G0245800 Rhododendron simsii HOM05D000007 ORTHO05D013648 1.3e-14 84.7 69 65.2
SMO147G0048 Selaginella moellendorffii HOM05D000522 ORTHO05D004380 2.2e-14 84.0 137 38.0
CSS0005666 Camellia sinensis var. sinensis HOM05D000522 ORTHO05D033858 8.4e-14 82.0 106 49.1
QL02p086054 Quercus lobata HOM05D000522 ORTHO05D004380 4.2e-13 79.7 50 76.0
SEGI_36085 Sequoiadendron giganteum HOM05D000522 ORTHO05D004380 9.3e-13 78.6 106 45.3
Pp3c2_2910 Physcomitrium patens HOM05D000522 ORTHO05D004380 1.2e-12 78.2 137 38.0
Mapoly0126s0026 Marchantia polymorpha HOM05D000522 ORTHO05D004380 3.5e-12 76.6 136 39.0
RcHm_v2.0_Chr2g0092761 Rosa chinensis HOM05D000522 ORTHO05D004380 3.5e-12 76.6 100 46.0
RcHm_v2.0_Chr2g0092831 Rosa chinensis HOM05D000522 ORTHO05D004380 3.5e-12 76.6 100 46.0
AagrBONN_evm.TU.Sc2ySwM_340.302 Anthoceros agrestis HOM05D000522 ORTHO05D004380 6.0e-12 75.9 136 36.8
Oeu055871.1 Olea europaea HOM05D000522 ORTHO05D004380 6.0e-12 75.9 149 41.6
Pp3c14_25790 Physcomitrium patens HOM05D000522 ORTHO05D004380 1.0e-11 75.1 144 34.0
vmacro06073 Vaccinium macrocarpon HOM05D000331 ORTHO05D021523 6.7e-11 72.4 58 67.2
vmacro20532 Vaccinium macrocarpon HOM05D004109 ORTHO05D426529 6.7e-11 72.4 126 45.2
FvH4_1g04450 Fragaria vesca HOM05D000522 ORTHO05D004380 2.5e-10 70.5 51 62.7
vmacro13807 Vaccinium macrocarpon HOM05D004109 ORTHO05D005867 5.6e-10 69.3 44 84.1
vmacro23219 Vaccinium macrocarpon HOM05D004109 ORTHO05D005867 6.2e-09 65.9 44 79.5
Rhsim07G0074000 Rhododendron simsii HOM05D004109 ORTHO05D005867 8.2e-09 65.5 39 87.2
Nitab4.5_0005205g0020 Nicotiana tabacum HOM05D000522 ORTHO05D285514 3.1e-08 63.5 51 58.8
vmacro20533 Vaccinium macrocarpon HOM05D004109 ORTHO05D000800 4.0e-08 63.2 39 87.2
GSVIVG01001692001 Vitis vinifera HOM05D004109 ORTHO05D005867 7.6e-07 58.9 42 69.0
TAR369G0339 Trochodendron aralioides HOM05D004109 ORTHO05D005867 8.4e-06 55.5 46 63.0


User provided reference genes

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