Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08206 Vaccinium macrocarpon HOM05D007369 ORTHO05D009369 2.3e-205 718.8 386 100.0
Rhsim04G0215900 Rhododendron simsii HOM05D007369 ORTHO05D009369 1.5e-116 423.7 459 58.4
Dinv38329 Davidia involucrata HOM05D007369 ORTHO05D009369 7.5e-100 368.2 462 50.0
CSS0015973 Camellia sinensis var. sinensis HOM05D007369 ORTHO05D009369 2.4e-98 363.2 453 51.7
Actinidia23432 Actinidia chinensis HOM05D007369 ORTHO05D009369 7.8e-97 358.2 448 50.2
Actinidia40222 Actinidia chinensis HOM05D007369 ORTHO05D009369 4.1e-90 335.9 433 49.0
Hma1.2p1_0078F.1_g040800 Hydrangea macrophylla HOM05D007369 ORTHO05D009369 1.5e-79 300.8 456 43.6
QL06p007318 Quercus lobata HOM05D007369 ORTHO05D009369 4.6e-73 279.3 456 41.7
Cfa015498 Carpinus fangiana HOM05D007369 ORTHO05D009369 4.5e-68 262.7 456 40.6
Ciclev10005057m.g Citrus clementina HOM05D007369 ORTHO05D009369 1.7e-67 260.8 446 41.5
Duzib151G0340 Durio zibethinus HOM05D007369 ORTHO05D009369 6.4e-67 258.8 421 41.6
TAR636G2558 Trochodendron aralioides HOM05D007369 ORTHO05D009369 3.2e-66 256.5 470 38.9
CiPaw.02G086900 Carya illinoinensis HOM05D007369 ORTHO05D009369 2.7e-65 253.4 407 44.2
Thecc.04G277200 Theobroma cacao HOM05D007369 ORTHO05D009369 1.1e-61 241.5 458 38.0
Potri.008G195300 Populus trichocarpa HOM05D007369 ORTHO05D009369 3.4e-60 236.5 457 36.8
Prupe.1G142600 Prunus persica HOM05D007369 ORTHO05D009369 4.9e-59 232.6 462 38.1
Manes.15G017400 Manihot esculenta HOM05D007369 ORTHO05D009369 1.1e-58 231.5 444 36.0
GSVIVG01017812001 Vitis vinifera HOM05D007369 ORTHO05D009369 1.4e-58 231.1 445 37.3
MD13G1174200 Malus domestica HOM05D007369 ORTHO05D009369 4.2e-58 229.6 467 37.5
Oeu044796.2 Olea europaea HOM05D007369 ORTHO05D009369 5.7e-55 219.2 459 35.1
Nn3g21294 Nelumbo nucifera HOM05D007369 ORTHO05D009369 1.3e-54 218.0 461 34.5
Gohir.D09G060700 Gossypium hirsutum HOM05D007369 ORTHO05D009369 1.8e-53 214.2 448 35.5
Gorai.006G075300 Gossypium raimondii HOM05D007369 ORTHO05D009369 2.4e-53 213.8 466 35.2
VMungo0540G1702 Vigna mungo HOM05D007369 ORTHO05D009369 7.7e-52 208.8 461 34.1
Gohir.A09G061800 Gossypium hirsutum HOM05D007369 ORTHO05D009369 2.2e-51 207.2 442 35.5
Glyma.15G098300 Glycine max HOM05D007369 ORTHO05D009369 2.9e-51 206.8 419 35.6
Nn4g26033 Nelumbo nucifera HOM05D007369 ORTHO05D009369 7.2e-50 202.2 392 39.3
FAN22G0049 Fragaria x ananassa HOM05D007369 ORTHO05D009369 9.4e-50 201.8 426 37.6
Duzib052G0382 Durio zibethinus HOM05D007369 ORTHO05D009369 3.6e-49 199.9 449 34.1
Phvul.006G161000 Phaseolus vulgaris HOM05D007369 ORTHO05D009369 3.6e-49 199.9 453 34.0
MBI19_g37517_MAGBIO Magnolia biondii HOM05D007369 ORTHO05D009369 4.6e-49 199.5 425 37.2
RcHm_v2.0_Chr4g0420931 Rosa chinensis HOM05D007369 ORTHO05D009369 2.3e-48 197.2 460 33.9
Manes.03G190800 Manihot esculenta HOM05D007369 ORTHO05D009369 3.0e-48 196.8 326 40.8
FvH4_4g17160 Fragaria vesca HOM05D007369 ORTHO05D009369 6.7e-48 195.7 464 35.1
FAN12G1425 Fragaria x ananassa HOM05D007369 ORTHO05D009369 8.8e-48 195.3 464 35.1
Dinv44429 Davidia involucrata HOM05D007369 ORTHO05D009369 1.9e-47 194.1 369 38.2
Glyma.13G214800 Glycine max HOM05D007369 ORTHO05D009369 2.5e-47 193.7 453 33.8
COL.COLO4_13933 Corchorus olitorius HOM05D007369 ORTHO05D009369 9.7e-47 191.8 522 32.4
FAN12G3176 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.3e-46 191.4 464 34.9
Haze_01056 Corylus avellana HOM05D007369 ORTHO05D009369 6.3e-46 189.1 451 36.1
Sopen01g029630 Solanum pennellii HOM05D007369 ORTHO05D009369 1.1e-45 188.3 451 32.8
CANSAT78G0356 Cannabis sativa HOM05D007369 ORTHO05D009369 2.4e-45 187.2 461 33.0
CAN.G223.8 Capsicum annuum HOM05D007369 ORTHO05D009369 5.3e-45 186.0 452 33.8
ATR0706G035 Amborella trichopoda HOM05D007369 ORTHO05D009369 1.0e-43 181.8 469 32.8
Lalb_Chr18g0055751 Lupinus albus HOM05D007369 ORTHO05D009369 1.7e-43 181.0 459 32.7
Medtr8g093650 Medicago truncatula HOM05D007369 ORTHO05D009369 1.7e-43 181.0 489 29.7
FAN17G0929 Fragaria x ananassa HOM05D007369 ORTHO05D009369 5.0e-43 179.5 462 33.1
Oeu062882.1 Olea europaea HOM05D007369 ORTHO05D009369 5.0e-43 179.5 337 37.1
SGA_v2.0_scaffold57G20253 Striga asiatica HOM05D007369 ORTHO05D009369 5.0e-43 179.5 390 33.6
Aqoxy2G03087 Aquilegia oxysepala HOM05D007369 ORTHO05D009369 1.1e-42 178.3 428 35.7
SalBow2G2600 Salvia bowleyana HOM05D007369 ORTHO05D009369 1.4e-42 177.9 411 34.5
FAN07G2486 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.5e-42 177.2 457 33.0
TPR.G37368 Trifolium pratense HOM05D007369 ORTHO05D009369 2.1e-41 174.1 446 32.3
DCAR_002440 Daucus carota HOM05D007369 ORTHO05D009369 3.0e-40 170.2 319 35.7
Nitab4.5_0003067g0040 Nicotiana tabacum HOM05D007369 ORTHO05D009369 1.1e-39 168.3 406 34.5
Eucgr.B01264 Eucalyptus grandis HOM05D007369 ORTHO05D009369 2.0e-39 167.5 455 30.8
Psat1g187040 Pisum sativum HOM05D007369 ORTHO05D009369 4.4e-39 166.4 495 31.1
Solyc01g067700.3 Solanum lycopersicum HOM05D007369 ORTHO05D009369 4.4e-39 166.4 342 35.4
Sed0026345 Sechium edule HOM05D007369 ORTHO05D009369 9.7e-39 165.2 267 41.2
Cc03_g02400 Coffea canephora HOM05D007369 ORTHO05D009369 2.8e-38 163.7 425 33.4
ClCG05G005770 Citrullus lanatus HOM05D007369 ORTHO05D009369 1.8e-37 161.0 272 38.2
THA.LOC104820236 Tarenaya hassleriana HOM05D007369 ORTHO05D009369 4.5e-36 156.4 281 35.9
Peaxi162Scf00386g00219 Petunia axillaris HOM05D007369 ORTHO05D009369 1.7e-35 154.5 320 35.0
CsaV3_3G014100 Cucumis sativus L. HOM05D007369 ORTHO05D009369 2.9e-35 153.7 279 40.1
arahy.Tifrunner.gnm1.ann1.ED76E0 Arachis hypogaea HOM05D007369 ORTHO05D009369 1.4e-34 151.4 407 33.9
Ca_00577_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 5.5e-34 149.4 322 33.9
Potri.010G031250 Populus trichocarpa HOM05D007369 ORTHO05D009369 9.4e-34 148.7 212 44.3
MD16G1175700 Malus domestica HOM05D007369 ORTHO05D009369 1.2e-33 148.3 94 75.5
ECA240G2128 Erigeron canadensis HOM05D007369 ORTHO05D009369 1.6e-33 147.9 371 32.6
arahy.Tifrunner.gnm1.ann1.IR05CW Arachis hypogaea HOM05D007369 ORTHO05D009369 1.4e-32 144.8 425 32.5
HanXRQChr03g0080111 Helianthus annuus HOM05D007369 ORTHO05D009369 1.4e-32 144.8 266 39.8
Migut.G00214 Erythranthe guttata HOM05D007369 ORTHO05D009369 5.2e-32 142.9 91 74.7
Sabra08G0148500 Salix brachista HOM05D007369 ORTHO05D009369 2.6e-31 140.6 142 57.7
TWI73G1273 Tripterygium wilfordii HOM05D007369 ORTHO05D009369 3.3e-31 140.2 143 55.9
TAR365G0645 Trochodendron aralioides HOM05D007369 ORTHO05D009369 3.7e-30 136.7 281 36.3
MELO3C031713.2 Cucumis melo HOM05D007369 ORTHO05D009369 5.9e-28 129.4 291 36.4
FAN17G3125 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.2e-27 127.5 141 51.1
Ca_17638_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 8.5e-27 125.6 515 27.0
Nitab4.5_0000197g0120 Nicotiana tabacum HOM05D007369 ORTHO05D009369 8.5e-27 125.6 403 30.0
MD16G1175500 Malus domestica HOM05D007369 ORTHO05D009369 1.5e-23 114.8 279 35.1
Atru.chr4.2750 Acer truncatum HOM05D007369 ORTHO05D009369 3.7e-22 110.2 168 41.7
Sc13g0003630 Simmondsia chinensis HOM05D007369 ORTHO05D009369 1.7e-19 101.3 350 29.7
LjContig00389g0017607 Lotus japonicus HOM05D007369 ORTHO05D009369 6.5e-19 99.4 377 26.3
Zm00001eb410560 Zea mays HOM05D007369 ORTHO05D009369 2.5e-18 97.4 249 32.5
Lsat_1_v5_gn_5_50560 Lactuca sativa HOM05D007369 ORTHO05D009369 5.5e-18 96.3 249 33.3
Mapoly0126s0031 Marchantia polymorpha HOM05D007369 ORTHO05D009369 3.4e-15 87.0 137 40.1
Hund24911 Selenicereus undatus HOM05D007369 ORTHO05D009369 7.5e-15 85.9 426 25.6
Atru.chr4.2749 Acer truncatum HOM05D007369 ORTHO05D009369 7.0e-13 79.3 87 52.9
SEGI_26846 Sequoiadendron giganteum HOM05D007369 ORTHO05D009369 1.5e-10 71.6 174 29.3
Mapoly0008s0171 Marchantia polymorpha HOM05D007369 ORTHO05D009369 2.5e-10 70.9 63 47.6
AagrBONN_evm.TU.Sc2ySwM_362.2687 Anthoceros agrestis HOM05D007369 ORTHO05D009369 2.6e-07 60.8 115 36.5
Lalb_Chr20g0118171 Lupinus albus HOM05D007369 ORTHO05D009369 2.6e-07 60.8 56 58.9
PGSC0003DMG401010654 Solanum tuberosum HOM05D007369 ORTHO05D009369 9.8e-07 58.9 51 58.8


User provided reference genes

Program Settings