Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08192 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 1.6e-207 726.5 569 100.0
vmacro08195 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 1.5e-96 357.8 311 84.6
Rhsim04G0217100 Rhododendron simsii HOM05D000880 ORTHO05D009684 1.6e-77 294.7 309 72.8
Actinidia06447 Actinidia chinensis HOM05D000880 ORTHO05D009684 1.4e-62 245.0 309 63.8
Dinv15656 Davidia involucrata HOM05D000880 ORTHO05D009684 5.8e-48 196.4 309 60.2
CSS0007644 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D009684 2.1e-42 177.9 300 57.7
TAR626G1204 Trochodendron aralioides HOM05D000880 ORTHO05D009684 1.0e-36 159.1 303 53.8
Cfa013251 Carpinus fangiana HOM05D000880 ORTHO05D008158 4.3e-35 153.7 307 52.1
CiPaw.07G214800 Carya illinoinensis HOM05D000880 ORTHO05D009684 7.3e-35 152.9 319 50.2
Lj4A910T18 Lonicera japonica HOM05D000880 ORTHO05D009684 1.1e-33 149.1 305 54.8
Lj6C69T3 Lonicera japonica HOM05D000880 ORTHO05D009684 1.1e-33 149.1 306 54.2
QL12p024656 Quercus lobata HOM05D000880 ORTHO05D009684 6.9e-33 146.4 292 51.7
Atru.chr7.2671 Acer truncatum HOM05D000880 ORTHO05D009684 4.5e-32 143.7 303 51.5
Cpa.g.sc10.206 Carica papaya HOM05D000880 ORTHO05D009684 1.7e-31 141.7 302 53.6
Nn8g39798 Nelumbo nucifera HOM05D000880 ORTHO05D009684 2.2e-31 141.4 301 53.5
Lalb_Chr03g0032741 Lupinus albus HOM05D000880 ORTHO05D009684 1.6e-29 135.2 315 47.9
Manes.07G088100 Manihot esculenta HOM05D000880 ORTHO05D009684 2.7e-29 134.4 296 51.7
Prupe.1G462500 Prunus persica HOM05D000880 ORTHO05D009684 4.6e-29 133.7 309 48.5
Ciclev10007859m.g Citrus clementina HOM05D000880 ORTHO05D009684 3.0e-28 131.0 306 51.0
MD08G1133900 Malus domestica HOM05D000880 ORTHO05D009684 3.9e-28 130.6 307 48.2
Cc08_g06370 Coffea canephora HOM05D000880 ORTHO05D009684 8.7e-28 129.4 318 53.1
Nitab4.5_0000502g0180 Nicotiana tabacum HOM05D000880 ORTHO05D009684 1.3e-26 125.6 309 49.8
Solyc03g120070.4 Solanum lycopersicum HOM05D000880 ORTHO05D009684 1.6e-26 125.2 309 50.2
PGSC0003DMG400005692 Solanum tuberosum HOM05D000880 ORTHO05D009684 1.4e-25 122.1 309 51.1
FAN24G3119 Fragaria x ananassa HOM05D000880 ORTHO05D009684 4.0e-25 120.6 324 48.1
Sopen03g038940 Solanum pennellii HOM05D000880 ORTHO05D009684 4.0e-25 120.6 309 50.8
Haze_21694 Corylus avellana HOM05D000880 ORTHO05D009684 5.3e-25 120.2 258 54.7
RcHm_v2.0_Chr6g0312241 Rosa chinensis HOM05D000880 ORTHO05D009684 6.9e-25 119.8 322 47.2
Sed0004667 Sechium edule HOM05D000880 ORTHO05D009684 2.0e-24 118.2 308 47.1
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 3.4e-24 117.5 330 46.1
Aa31LG10G9610 Aethionema arabicum HOM05D000880 ORTHO05D009684 7.6e-24 116.3 326 46.3
Lsat_1_v5_gn_5_33201 Lactuca sativa HOM05D000880 ORTHO05D009684 7.6e-24 116.3 184 36.4
Ca_12883_v3 Cicer arietinum L. HOM05D000880 ORTHO05D009684 9.9e-24 115.9 259 53.7
Peaxi162Scf00288g01016 Petunia axillaris HOM05D000880 ORTHO05D009684 9.9e-24 115.9 299 51.8
Potri.018G004400 Populus trichocarpa HOM05D000880 ORTHO05D009684 9.9e-24 115.9 307 50.8
arahy.Tifrunner.gnm1.ann1.CHY0RW Arachis hypogaea HOM05D000880 ORTHO05D009684 3.8e-23 114.0 330 45.8
ClCG08G012780 Citrullus lanatus HOM05D006422 ORTHO05D007992 8.4e-23 112.8 290 49.3
FAN20G2124 Fragaria x ananassa HOM05D000880 ORTHO05D009684 1.1e-22 112.5 323 47.4
MELO3C011202.2 Cucumis melo HOM05D000880 ORTHO05D009684 7.1e-22 109.8 290 50.0
HanXRQChr07g0202221 Helianthus annuus HOM05D000880 ORTHO05D009684 1.2e-21 109.0 182 35.2
CsaV3_2G031530 Cucumis sativus L. HOM05D000880 ORTHO05D009684 4.6e-21 107.1 255 53.7
Lj3g0007027 Lotus japonicus HOM05D000880 ORTHO05D009684 6.0e-21 106.7 258 43.4
Aqoxy5G01876 Aquilegia oxysepala HOM05D000880 ORTHO05D009684 7.9e-21 106.3 302 49.0
Glyma.13G197400 Glycine max HOM05D000880 ORTHO05D009684 7.9e-21 106.3 251 53.4
Migut.E01433 Erythranthe guttata HOM05D000880 ORTHO05D009684 1.3e-20 105.5 309 47.2
CANSAT78G1387 Cannabis sativa HOM05D000880 ORTHO05D009684 1.8e-20 105.1 308 46.8
SGA_v2.0_scaffold121G33022 Striga asiatica HOM05D000880 ORTHO05D009684 1.8e-20 105.1 312 41.7
TPR.G12115 Trifolium pratense HOM05D000880 ORTHO05D009684 1.5e-19 102.1 302 45.4
Hund04480 Selenicereus undatus HOM05D000880 ORTHO05D009684 1.9e-19 101.7 260 55.0
Thecc.09G004700 Theobroma cacao HOM05D000880 ORTHO05D009684 4.3e-19 100.5 163 37.4
CSS0003109 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D009684 5.6e-19 100.1 101 52.5
FvH4_2g30660 Fragaria vesca HOM05D000880 ORTHO05D009684 5.6e-19 100.1 280 50.0
AUR62017906 Chenopodium quinoa HOM05D000880 ORTHO05D009684 1.3e-18 99.0 250 52.0
FAN27G3148 Fragaria x ananassa HOM05D000880 ORTHO05D009684 2.8e-18 97.8 249 54.2
PGR044G0315 Punica granatum HOM05D000880 ORTHO05D009684 6.2e-18 96.7 295 48.8
Aa31LG10G9680 Aethionema arabicum HOM05D000880 ORTHO05D009684 1.1e-17 95.9 314 44.6
PSO017G1147 Papaver somniferum HOM05D000880 ORTHO05D001950 1.8e-17 95.1 168 33.3
AUR62003593 Chenopodium quinoa HOM05D000880 ORTHO05D009684 3.1e-17 94.4 237 53.6
Psat6g031840 Pisum sativum HOM05D000880 ORTHO05D009684 3.1e-17 94.4 288 50.7
VMungo1127G1257 Vigna mungo HOM05D000880 ORTHO05D009684 3.1e-17 94.4 230 57.4
Sabra18G0010100 Salix brachista HOM05D000880 ORTHO05D009684 5.3e-17 93.6 300 48.0
Oeu040613.1 Olea europaea HOM05D000880 ORTHO05D009684 6.9e-17 93.2 167 37.7
ECA232G0576 Erigeron canadensis HOM05D000880 ORTHO05D009684 1.2e-16 92.4 138 36.2
Sabra18G0001200 Salix brachista HOM05D000880 ORTHO05D009684 1.5e-16 92.0 299 47.8
Medtr1g010020 Medicago truncatula HOM05D000880 ORTHO05D009684 2.6e-16 91.3 250 54.4
GSVIVG01003996001 Vitis vinifera HOM05D000880 ORTHO05D009684 4.5e-16 90.5 173 68.2
Phvul.011G207000 Phaseolus vulgaris HOM05D000880 ORTHO05D009684 1.7e-15 88.6 261 51.7
Thhalv10003880m.g Eutrema salsugineum HOM05D000880 ORTHO05D009684 4.9e-15 87.0 150 35.3
Glyma.15G236000 Glycine max HOM05D000880 ORTHO05D009684 2.5e-14 84.7 173 63.0
EL10Ac6g15284 Beta vulgaris HOM05D000880 ORTHO05D009684 5.5e-14 83.6 248 54.0
SalBow8G2909 Salvia bowleyana HOM05D004918 ORTHO05D005706 9.3e-14 82.8 308 44.8
ECA236G3570 Erigeron canadensis HOM05D000705 ORTHO05D002970 2.1e-13 81.6 118 37.3
Haze_10332 Corylus avellana HOM05D000880 ORTHO05D009684 7.9e-13 79.7 175 65.1
Ah.02g121750 Amaranthus hybridus HOM05D000880 ORTHO05D009684 1.3e-12 79.0 235 52.8
Nitab4.5_0001956g0020 Nicotiana tabacum HOM05D000880 ORTHO05D009684 1.8e-12 78.6 241 55.2
Eucgr.H00073 Eucalyptus grandis HOM05D000880 ORTHO05D009684 8.7e-12 76.3 297 46.5
Sp2g22620 Schrenkiella parvula HOM05D000880 ORTHO05D009684 8.7e-12 76.3 152 31.6
A06p35600 Brassica napus HOM05D000880 ORTHO05D009684 1.1e-11 75.9 152 32.9
DCAR_017077 Daucus carota HOM05D000880 ORTHO05D009684 1.1e-11 75.9 162 62.3
CARHR188620 Cardamine hirsuta HOM05D000880 ORTHO05D009684 1.5e-11 75.5 153 32.7
Carub.0006s2268 Capsella rubella HOM05D000880 ORTHO05D009684 3.3e-11 74.3 148 32.4
AT5G24830 Arabidopsis thaliana HOM05D000880 ORTHO05D009684 4.3e-11 73.9 148 31.8
BraA06t26485Z Brassica rapa HOM05D000880 ORTHO05D009684 4.3e-11 73.9 151 33.1
C07p42940 Brassica napus HOM05D000880 ORTHO05D009684 4.8e-10 70.5 150 31.3
BolC7t44823H Brassica oleracea HOM05D000880 ORTHO05D009684 4.8e-10 70.5 150 31.3
Sc07g0001710 Simmondsia chinensis HOM05D000880 ORTHO05D009684 1.4e-09 68.9 117 33.3
MSTRG.13951 Avicennia marina HOM05D000880 ORTHO05D009684 4.1e-09 67.4 207 59.4
MBI13_g01685_MAGBIO Magnolia biondii HOM05D000880 ORTHO05D001950 5.9e-08 63.5 157 27.4
AL6G36470 Arabidopsis lyrata HOM05D000880 ORTHO05D009684 1.3e-07 62.4 147 29.3
MD15G1110300 Malus domestica HOM05D000880 ORTHO05D009684 1.3e-07 62.4 164 61.6
BcaNung01260 Brassica carinata HOM05D000880 ORTHO05D009684 2.2e-07 61.6 140 31.4
DCAR_017076 Daucus carota HOM05D000880 ORTHO05D009684 8.5e-07 59.7 125 36.0
Pp3c25_1240 Physcomitrium patens HOM05D000366 ORTHO05D001950 8.5e-07 59.7 134 35.8
Cpa.g.sc10.208 Carica papaya HOM05D000880 ORTHO05D009684 2.5e-06 58.2 53 56.6
Mapoly0043s0135 Marchantia polymorpha HOM05D000366 ORTHO05D001950 3.2e-06 57.8 96 39.6
Mapoly0124s0041 Marchantia polymorpha HOM05D000366 ORTHO05D001950 3.2e-06 57.8 96 39.6
AagrBONN_evm.TU.Sc2ySwM_362.2676 Anthoceros agrestis HOM05D000366 ORTHO05D001950 4.2e-06 57.4 96 39.6
MBI15_g23252_MAGBIO Magnolia biondii HOM05D001920 ORTHO05D004895 5.5e-06 57.0 96 38.5


User provided reference genes

Program Settings