Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08101 Vaccinium macrocarpon HOM05D005296 ORTHO05D006452 2.8e-185 651.7 317 100.0
Rhsim04G0228000 Rhododendron simsii HOM05D005296 ORTHO05D006452 2.3e-134 482.6 341 75.7
Atru.chr4.2920 Acer truncatum HOM05D005296 ORTHO05D006452 1.9e-117 426.4 292 72.6
Hma1.2p1_1352F.1_g277550 Hydrangea macrophylla HOM05D005296 ORTHO05D006452 4.3e-117 425.2 258 77.5
TAR633G2374 Trochodendron aralioides HOM05D005296 ORTHO05D006452 4.0e-115 418.7 233 84.5
Prupe.1G129900 Prunus persica HOM05D005296 ORTHO05D006452 6.8e-115 417.9 282 73.8
Haze_01146 Corylus avellana HOM05D005296 ORTHO05D006452 8.9e-115 417.5 285 74.0
Lj3A826T78 Lonicera japonica HOM05D005296 ORTHO05D006452 1.5e-114 416.8 337 66.8
arahy.Tifrunner.gnm1.ann1.GJ345V Arachis hypogaea HOM05D005296 ORTHO05D006452 7.5e-114 414.5 278 73.0
Manes.15G009300 Manihot esculenta HOM05D005296 ORTHO05D006452 9.8e-114 414.1 279 73.8
QL06p010871 Quercus lobata HOM05D005296 ORTHO05D006452 1.7e-113 413.3 279 74.2
GSVIVG01035092001 Vitis vinifera HOM05D005296 ORTHO05D006452 2.2e-113 412.9 236 83.5
Gorai.002G028900 Gossypium raimondii HOM05D005296 ORTHO05D006452 4.9e-113 411.8 250 79.2
HanXRQChr03g0083871 Helianthus annuus HOM05D005296 ORTHO05D006452 8.3e-113 411.0 289 71.6
RcHm_v2.0_Chr4g0423631 Rosa chinensis HOM05D005296 ORTHO05D006452 1.1e-112 410.6 329 67.2
Gohir.D01G023502 Gossypium hirsutum HOM05D005296 ORTHO05D006452 3.2e-112 409.1 250 78.4
TWI09G1158 Tripterygium wilfordii HOM05D005296 ORTHO05D006452 3.2e-112 409.1 287 70.7
Aqoxy5G00802 Aquilegia oxysepala HOM05D005296 ORTHO05D006452 4.1e-112 408.7 233 82.0
Solyc12g099400.2 Solanum lycopersicum HOM05D005296 ORTHO05D006452 5.4e-112 408.3 265 74.3
THA.LOC104821787 Tarenaya hassleriana HOM05D005296 ORTHO05D006452 7.1e-112 407.9 273 72.5
Actinidia40306 Actinidia chinensis HOM05D005296 ORTHO05D006452 9.2e-112 407.5 257 78.6
Gohir.A01G033200 Gossypium hirsutum HOM05D005296 ORTHO05D006452 1.2e-111 407.1 294 69.4
CAN.G484.51 Capsicum annuum HOM05D005296 ORTHO05D006452 2.1e-111 406.4 243 77.0
Sopen12g034070 Solanum pennellii HOM05D005296 ORTHO05D006452 2.1e-111 406.4 265 73.6
FAN07G1138 Fragaria x ananassa HOM05D005296 ORTHO05D006452 3.5e-111 405.6 331 65.0
Carub.0007s2556 Capsella rubella HOM05D005296 ORTHO05D006452 4.6e-111 405.2 287 68.6
Ciclev10005508m.g Citrus clementina HOM05D005296 ORTHO05D006452 4.6e-111 405.2 256 78.1
Glyma.15G152600 Glycine max HOM05D005296 ORTHO05D006452 6.0e-111 404.8 285 70.5
MD16G1162300 Malus domestica HOM05D005296 ORTHO05D006452 6.0e-111 404.8 259 74.5
AL7G39130 Arabidopsis lyrata HOM05D005296 ORTHO05D006452 7.8e-111 404.4 291 69.1
Cpa.g.sc9.118 Carica papaya HOM05D005296 ORTHO05D006452 1.0e-110 404.1 233 81.1
FvH4_4g18820 Fragaria vesca HOM05D005296 ORTHO05D006452 1.0e-110 404.1 331 64.4
Potri.010G006000 Populus trichocarpa HOM05D005296 ORTHO05D006452 1.0e-110 404.1 293 69.6
Sc13g0006220 Simmondsia chinensis HOM05D005296 ORTHO05D006452 3.0e-110 402.5 235 80.9
Aa31LG10G6140 Aethionema arabicum HOM05D005296 ORTHO05D006452 3.9e-110 402.1 251 75.7
PGSC0003DMG400004702 Solanum tuberosum HOM05D005296 ORTHO05D006452 5.1e-110 401.7 265 72.8
GSVIVG01035093001 Vitis vinifera HOM05D005296 ORTHO05D006452 1.1e-109 400.6 292 69.5
Eucgr.A01317 Eucalyptus grandis HOM05D005296 ORTHO05D006452 1.5e-109 400.2 307 68.1
AT4G16060 Arabidopsis thaliana HOM05D005296 ORTHO05D006452 1.9e-109 399.8 281 69.4
FAN17G2193 Fragaria x ananassa HOM05D005296 ORTHO05D006452 1.9e-109 399.8 331 64.0
Lalb_Chr15g0089391 Lupinus albus HOM05D005296 ORTHO05D006452 2.5e-109 399.4 296 69.3
Phvul.009G251800 Phaseolus vulgaris HOM05D005296 ORTHO05D006452 3.3e-109 399.1 235 79.6
Thecc.04G290700 Theobroma cacao HOM05D005296 ORTHO05D006452 3.3e-109 399.1 269 74.0
SGA_v2.0_scaffold91G28037 Striga asiatica HOM05D005296 ORTHO05D006452 5.6e-109 398.3 279 68.8
Ca_01907_v3 Cicer arietinum L. HOM05D005296 ORTHO05D006452 7.3e-109 397.9 233 81.1
Oeu033815.1 Olea europaea HOM05D005296 ORTHO05D006452 1.2e-108 397.1 235 78.7
Sabra10G0005100 Salix brachista HOM05D005296 ORTHO05D006452 2.1e-108 396.4 286 69.9
CiPaw.01G144600 Carya illinoinensis HOM05D005296 ORTHO05D006452 2.8e-108 396.0 233 81.5
Lj6g0024924 Lotus japonicus HOM05D005296 ORTHO05D006452 2.8e-108 396.0 254 75.2
MSTRG.24808 Avicennia marina HOM05D005296 ORTHO05D006452 4.7e-108 395.2 297 67.0
PSO832G0676 Papaver somniferum HOM05D005296 ORTHO05D006452 4.7e-108 395.2 236 79.7
A03p49510 Brassica napus HOM05D005296 ORTHO05D006452 6.2e-108 394.8 290 67.6
ECA240G3796 Erigeron canadensis HOM05D002249 ORTHO05D000452 6.2e-108 394.8 257 74.7
SGA_v2.0_scaffold119G32698 Striga asiatica HOM05D005296 ORTHO05D006452 6.2e-108 394.8 235 78.3
Oeu028323.1 Olea europaea HOM05D005296 ORTHO05D006452 8.1e-108 394.4 235 77.4
CARHR290680 Cardamine hirsuta HOM05D005296 ORTHO05D006452 1.4e-107 393.7 290 67.6
Cc03_g01400 Coffea canephora HOM05D005296 ORTHO05D006452 1.4e-107 393.7 245 75.5
PGR031G1375 Punica granatum HOM05D005296 ORTHO05D006452 1.4e-107 393.7 253 75.9
TPR.G24643 Trifolium pratense HOM05D005296 ORTHO05D006452 1.4e-107 393.7 233 79.8
Sp7g14530 Schrenkiella parvula HOM05D005296 ORTHO05D006452 2.3e-107 392.9 281 68.7
Dinv29712 Davidia involucrata HOM05D005296 ORTHO05D000287 5.2e-107 391.7 273 71.8
BcaC06g32977 Brassica carinata HOM05D005296 ORTHO05D006452 8.9e-107 391.0 233 78.5
BcaC06g33433 Brassica carinata HOM05D005296 ORTHO05D006452 8.9e-107 391.0 261 72.0
Cfa015446 Carpinus fangiana HOM05D005296 ORTHO05D006452 8.9e-107 391.0 236 80.5
Nitab4.5_0003484g0020 Nicotiana tabacum HOM05D005296 ORTHO05D006452 8.9e-107 391.0 279 68.8
BcaC06g33432 Brassica carinata HOM05D005296 ORTHO05D006452 1.5e-106 390.2 291 66.3
MBI19_g08248_MAGBIO Magnolia biondii HOM05D005296 ORTHO05D006452 1.5e-106 390.2 233 76.0
Medtr2g435540 Medicago truncatula HOM05D005296 ORTHO05D006452 1.5e-106 390.2 233 79.4
AUR62035079 Chenopodium quinoa HOM05D005296 ORTHO05D006452 2.0e-106 389.8 235 77.9
VMungo1309G1137 Vigna mungo HOM05D005296 ORTHO05D006452 2.0e-106 389.8 345 60.9
BolC7t45282H Brassica oleracea HOM05D005296 ORTHO05D006452 2.6e-106 389.4 290 66.9
Thhalv10025823m.g Eutrema salsugineum HOM05D005296 ORTHO05D006452 2.6e-106 389.4 233 77.3
Psat1g156080 Pisum sativum HOM05D005296 ORTHO05D006452 9.9e-106 387.5 233 78.1
C07p47580 Brassica napus HOM05D005296 ORTHO05D006452 1.3e-105 387.1 259 72.6
AUR62016165 Chenopodium quinoa HOM05D005296 ORTHO05D006452 2.9e-105 386.0 235 77.4
unitig_22.g6340 Utricularia gibba HOM05D005296 ORTHO05D006452 2.9e-105 386.0 263 70.3
Migut.N00068 Erythranthe guttata HOM05D005296 ORTHO05D006452 3.8e-105 385.6 235 77.4
MELO3C021302.2 Cucumis melo HOM05D005296 ORTHO05D006452 1.4e-104 383.6 256 69.9
Peaxi162Scf03294g00016 Petunia axillaris HOM05D005296 ORTHO05D006452 5.4e-104 381.7 259 72.2
C07p47550 Brassica napus HOM05D005296 ORTHO05D006452 2.7e-103 379.4 282 67.0
BraA03t14050Z Brassica rapa HOM05D005296 ORTHO05D006452 2.3e-102 376.3 295 65.1
CsaV3_6G022690 Cucumis sativus L. HOM05D005296 ORTHO05D006452 6.6e-102 374.8 256 69.1
Nn3g21572 Nelumbo nucifera HOM05D005296 ORTHO05D006452 6.6e-102 374.8 296 64.9
Os05g0358400 Oryza sativa ssp. japonica HOM05D005296 ORTHO05D006452 3.3e-101 372.5 235 74.5
SEGI_03423 Sequoiadendron giganteum HOM05D005296 ORTHO05D006452 5.6e-101 371.7 235 74.9
arahy.Tifrunner.gnm1.ann1.28UQCP Arachis hypogaea HOM05D005296 ORTHO05D006452 1.6e-100 370.2 233 70.8
Nitab4.5_0000570g0290 Nicotiana tabacum HOM05D005296 ORTHO05D006452 6.2e-100 368.2 240 72.9
arahy.Tifrunner.gnm1.ann1.5R3I64 Arachis hypogaea HOM05D005296 ORTHO05D006452 1.4e-99 367.1 233 70.0
Sed0027436 Sechium edule HOM05D005296 ORTHO05D006452 1.8e-99 366.7 235 71.9
SalBow5G1780 Salvia bowleyana HOM05D005296 ORTHO05D006452 9.9e-98 360.9 298 62.8
Zm00001eb346400 Zea mays HOM05D005296 ORTHO05D006452 1.3e-97 360.5 233 73.4
CsaV3_6G022680 Cucumis sativus L. HOM05D005296 ORTHO05D006452 2.9e-97 359.4 235 72.3
CsaV3_6G022700 Cucumis sativus L. HOM05D005296 ORTHO05D006452 1.4e-96 357.1 235 70.6
VMungo1215G1937 Vigna mungo HOM05D005296 ORTHO05D006452 1.3e-94 350.5 236 67.4
Glyma.07G244600 Glycine max HOM05D005296 ORTHO05D006452 3.3e-93 345.9 236 66.1
Lalb_Chr07g0182261 Lupinus albus HOM05D005296 ORTHO05D006452 2.1e-92 343.2 232 67.2
ATR0730G096 Amborella trichopoda HOM05D005296 ORTHO05D006452 1.1e-91 340.9 233 66.5
Ca_21474_v3 Cicer arietinum L. HOM05D005296 ORTHO05D006452 2.4e-91 339.7 219 70.8
Psat4g024760 Pisum sativum HOM05D005296 ORTHO05D006452 6.9e-91 338.2 219 69.4
Phvul.003G108300 Phaseolus vulgaris HOM05D005296 ORTHO05D006452 9.9e-90 334.3 249 62.7
Medtr4g120420 Medicago truncatula HOM05D005296 ORTHO05D006452 1.7e-89 333.6 219 68.0
ATR1131G025 Amborella trichopoda HOM05D005296 ORTHO05D006452 2.9e-89 332.8 234 64.5
Lj4g0000030 Lotus japonicus HOM05D005296 ORTHO05D006452 2.9e-89 332.8 230 64.8
Pp3c24_6150 Physcomitrium patens HOM05D005296 ORTHO05D006452 7.1e-88 328.2 234 65.4
ATR1127G052 Amborella trichopoda HOM05D005296 ORTHO05D006452 2.3e-86 323.2 237 64.1
Duzib151G0219 Durio zibethinus HOM05D005296 ORTHO05D006452 1.1e-85 320.9 293 58.4
FAN12G2682 Fragaria x ananassa HOM05D005296 ORTHO05D006452 3.3e-85 319.3 330 55.8
AagrBONN_evm.TU.Sc2ySwM_228.710 Anthoceros agrestis HOM05D005296 ORTHO05D006452 4.3e-85 318.9 233 65.2
ATR0916G003 Amborella trichopoda HOM05D005296 ORTHO05D006452 2.4e-83 313.2 228 63.2
Ciclev10024287m.g Citrus clementina HOM05D005296 ORTHO05D006452 4.0e-83 312.4 223 70.9
SMO367G1004 Selaginella moellendorffii HOM05D005296 ORTHO05D006452 5.8e-82 308.5 245 60.8
Mapoly0019s0068 Marchantia polymorpha HOM05D005296 ORTHO05D006452 1.4e-80 303.9 233 64.4
DCAR_002489 Daucus carota HOM05D005296 ORTHO05D006452 2.3e-78 296.6 234 62.4
COL.COLO4_03630 Corchorus olitorius HOM05D005296 ORTHO05D006452 2.4e-75 286.6 236 64.0
CSS0013365 Camellia sinensis var. sinensis HOM05D005296 ORTHO05D006452 2.6e-74 283.1 248 62.5
SHI00197 Sapria himalayana HOM05D005296 ORTHO05D006452 3.8e-73 279.3 184 71.7
MELO3C021303.2 Cucumis melo HOM05D005296 ORTHO05D006452 8.4e-73 278.1 235 59.1
TPR.G22773 Trifolium pratense HOM05D005296 ORTHO05D006452 3.2e-72 276.2 185 66.5
SGA_v2.0_scaffold146G36237 Striga asiatica HOM05D005296 ORTHO05D006452 3.9e-70 269.2 238 55.9
EL10Ac3g04942 Beta vulgaris HOM05D005296 ORTHO05D006452 2.1e-68 263.5 162 75.3
ClCG06G004890 Citrullus lanatus HOM05D005296 ORTHO05D006452 1.4e-67 260.8 290 52.8
CBR_g37153 Chara braunii HOM05D005296 ORTHO05D006452 1.5e-66 257.3 298 46.0
Lsat_1_v5_gn_6_76180 Lactuca sativa HOM05D002249 ORTHO05D002443 1.6e-63 247.3 243 57.6
Hund03087 Selenicereus undatus HOM05D005296 ORTHO05D006452 1.8e-62 243.8 165 72.1
FAN12G3138 Fragaria x ananassa HOM05D005296 ORTHO05D006452 6.7e-62 241.9 262 53.4
Duzib212G0376 Durio zibethinus HOM05D005296 ORTHO05D006452 7.7e-58 228.4 196 59.7
HPP92_006907 Vanilla planifolia HOM05D005296 ORTHO05D006452 5.0e-57 225.7 166 65.1
CDE08G0885 Ceratophyllum demersum HOM05D005296 ORTHO05D006452 1.8e-54 217.2 156 65.4
Cre12.g494250 Chlamydomonas reinhardtii HOM05D005296 ORTHO05D006452 1.8e-51 207.2 287 42.5
Psat4g063800 Pisum sativum HOM05D005296 ORTHO05D006452 1.5e-50 204.1 120 72.5
MCO07G237 Micromonas commoda HOM05D005296 ORTHO05D006452 2.8e-44 183.3 273 42.9
TPR.G17880 Trifolium pratense HOM05D005296 ORTHO05D006452 1.4e-38 164.5 115 65.2
SGA_v2.0_scaffold227G43235 Striga asiatica HOM05D005296 ORTHO05D006452 7.0e-35 152.1 135 58.5
MELO3C034931.2 Cucumis melo HOM05D005296 ORTHO05D006452 2.7e-34 150.2 112 65.2
Ah.04g155180 Amaranthus hybridus HOM05D005296 ORTHO05D006452 3.5e-34 149.8 130 60.8
PGR031G0664 Punica granatum HOM05D005296 ORTHO05D006452 1.5e-32 144.4 282 40.1
Psat4g063760 Pisum sativum HOM05D005296 ORTHO05D006452 4.7e-31 139.4 101 64.4
CBR_g19333 Chara braunii HOM05D005296 ORTHO05D006452 1.2e-29 134.8 137 50.4
MD02G1019800 Malus domestica HOM05D005296 ORTHO05D006452 7.0e-27 125.6 72 77.8
arahy.Tifrunner.gnm1.ann1.GS2NMQ Arachis hypogaea HOM05D005296 ORTHO05D006452 2.8e-20 103.6 58 86.2
Hma1.2p1_0718F.1_g208290 Hydrangea macrophylla HOM05D005296 ORTHO05D006452 4.1e-19 99.8 94 55.3
Hma1.2p1_0180F.1_g079860 Hydrangea macrophylla HOM05D005296 ORTHO05D006452 2.7e-18 97.1 92 57.6
arahy.Tifrunner.gnm1.ann1.GK6QEP Arachis hypogaea HOM05D005296 ORTHO05D006452 3.8e-17 93.2 77 57.1
arahy.Tifrunner.gnm1.ann1.3T38WV Arachis hypogaea HOM05D005296 ORTHO05D006452 6.1e-15 85.9 57 66.7
Hma1.2p1_1570F.1_g291260 Hydrangea macrophylla HOM05D005296 ORTHO05D006452 4.0e-14 83.2 53 69.8


User provided reference genes

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