Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08057 Vaccinium macrocarpon HOM05D006322 ORTHO05D007716 1.0e-128 463.4 226 100.0
Rhsim04G0234900 Rhododendron simsii HOM05D006322 ORTHO05D007716 2.4e-106 389.0 216 84.7
Actinidia40367 Actinidia chinensis HOM05D006322 ORTHO05D007716 2.6e-92 342.4 215 75.8
CSS0012053 Camellia sinensis var. sinensis HOM05D006322 ORTHO05D007716 4.9e-91 338.2 219 70.8
Peaxi162Scf00244g00413 Petunia axillaris HOM05D006322 ORTHO05D007716 7.3e-87 324.3 222 66.7
Nitab4.5_0001807g0060 Nicotiana tabacum HOM05D006322 ORTHO05D007716 5.2e-85 318.2 222 64.4
Nitab4.5_0002259g0050 Nicotiana tabacum HOM05D006322 ORTHO05D007716 1.2e-84 317.0 222 64.4
Oeu019970.1 Olea europaea HOM05D006322 ORTHO05D007716 2.0e-84 316.2 222 65.3
Manes.03G203000 Manihot esculenta HOM05D006322 ORTHO05D007716 2.6e-84 315.8 225 64.0
PGSC0003DMG400027315 Solanum tuberosum HOM05D006322 ORTHO05D007716 1.3e-83 313.5 213 65.3
TAR636G2967 Trochodendron aralioides HOM05D006322 ORTHO05D007716 2.2e-83 312.8 216 67.1
Sopen11g003410 Solanum pennellii HOM05D006322 ORTHO05D007716 3.8e-83 312.0 222 63.1
Solyc11g007570.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 6.4e-83 311.2 222 62.6
Medtr4g121940 Medicago truncatula HOM05D006322 ORTHO05D007716 8.4e-83 310.8 225 64.0
Lju470A16T21 Lonicera japonica HOM05D006322 ORTHO05D007716 1.4e-82 310.1 217 65.4
Phvul.003G113400 Phaseolus vulgaris HOM05D006322 ORTHO05D007716 2.4e-82 309.3 225 64.0
Haze_01283 Corylus avellana HOM05D006322 ORTHO05D007716 5.4e-82 308.1 214 65.9
VMungo1215G3118 Vigna mungo HOM05D006322 ORTHO05D007716 5.4e-82 308.1 225 64.0
Migut.N00046 Erythranthe guttata HOM05D006322 ORTHO05D007716 9.3e-82 307.4 217 65.0
COL.COLO4_34636 Corchorus olitorius HOM05D006322 ORTHO05D007716 1.6e-81 306.6 212 67.9
Glyma.17G032700 Glycine max HOM05D006322 ORTHO05D007716 3.5e-81 305.4 225 65.3
Thecc.04G298700 Theobroma cacao HOM05D006322 ORTHO05D007716 6.0e-81 304.7 212 66.5
QL06p011774 Quercus lobata HOM05D006322 ORTHO05D007716 1.0e-80 303.9 214 65.0
Lj4g0019910 Lotus japonicus HOM05D006322 ORTHO05D007716 1.7e-80 303.1 226 63.3
SalBow5G5236 Salvia bowleyana HOM05D006322 ORTHO05D007716 2.3e-80 302.8 208 63.5
Eucgr.A00353 Eucalyptus grandis HOM05D006322 ORTHO05D007716 3.9e-80 302.0 222 62.6
Cc03_g00960 Coffea canephora HOM05D006322 ORTHO05D007716 5.1e-80 301.6 221 61.5
Cfa015332 Carpinus fangiana HOM05D006322 ORTHO05D007716 6.6e-80 301.2 214 64.0
Hma1.2p1_0078F.1_g040000 Hydrangea macrophylla HOM05D006322 ORTHO05D007716 8.7e-80 300.8 212 66.0
Potri.008G106600 Populus trichocarpa HOM05D006322 ORTHO05D007716 1.1e-79 300.4 216 65.3
CANSAT78G1173 Cannabis sativa HOM05D006322 ORTHO05D007716 1.5e-79 300.1 229 64.6
GSVIVG01035010001 Vitis vinifera HOM05D006322 ORTHO05D007716 1.5e-79 300.1 202 68.8
Gohir.D09G235800 Gossypium hirsutum HOM05D006322 ORTHO05D007716 1.9e-79 299.7 213 65.7
TWI09G0431 Tripterygium wilfordii HOM05D006322 ORTHO05D007716 1.9e-79 299.7 221 64.3
arahy.Tifrunner.gnm1.ann1.WPA2XH Arachis hypogaea HOM05D006322 ORTHO05D007716 4.3e-79 298.5 225 62.7
Nn3g21692 Nelumbo nucifera HOM05D006322 ORTHO05D007716 5.6e-79 298.1 215 64.2
Sabra08G0080400 Salix brachista HOM05D006322 ORTHO05D007716 7.3e-79 297.7 216 64.4
MBI19_g07237_MAGBIO Magnolia biondii HOM05D006322 ORTHO05D007716 1.3e-78 297.0 224 61.2
Gorai.006G258900 Gossypium raimondii HOM05D006322 ORTHO05D007716 1.6e-78 296.6 213 64.8
Gohir.A09G235000 Gossypium hirsutum HOM05D006322 ORTHO05D007716 2.1e-78 296.2 213 64.8
arahy.Tifrunner.gnm1.ann1.57P81C Arachis hypogaea HOM05D006322 ORTHO05D007716 2.8e-78 295.8 225 62.2
Atru.chr4.3025 Acer truncatum HOM05D006322 ORTHO05D007716 6.2e-78 294.7 223 62.3
EL10Ac3g05469 Beta vulgaris HOM05D006322 ORTHO05D007716 8.1e-78 294.3 221 62.4
PGR031G3552 Punica granatum HOM05D006322 ORTHO05D007716 8.1e-78 294.3 209 63.6
MSTRG.24817 Avicennia marina HOM05D006322 ORTHO05D007716 1.4e-77 293.5 219 61.2
SGA_v2.0_scaffold119G32659 Striga asiatica HOM05D006322 ORTHO05D007716 1.4e-77 293.5 213 63.4
Ca_21447_v3 Cicer arietinum L. HOM05D006322 ORTHO05D007716 4.0e-77 292.0 221 61.1
Duzib052G0456 Durio zibethinus HOM05D006322 ORTHO05D007716 4.0e-77 292.0 224 63.4
HanXRQChr13g0395571 Helianthus annuus HOM05D006322 ORTHO05D007716 4.0e-77 292.0 221 61.5
Aqoxy2G02768 Aquilegia oxysepala HOM05D006322 ORTHO05D007716 6.9e-77 291.2 211 64.5
Lalb_Chr13g0298441 Lupinus albus HOM05D006322 ORTHO05D007716 6.9e-77 291.2 208 64.4
Ciclev10005751m.g Citrus clementina HOM05D006322 ORTHO05D007716 1.2e-76 290.4 224 62.5
Duzib151G0960 Durio zibethinus HOM05D006322 ORTHO05D007716 2.6e-76 289.3 225 62.7
Psat4g024200 Pisum sativum HOM05D006322 ORTHO05D007716 5.8e-76 288.1 215 64.7
CiPaw.01G139400 Carya illinoinensis HOM05D006322 ORTHO05D007716 3.8e-75 285.4 214 60.3
DCAR_027007 Daucus carota HOM05D006322 ORTHO05D007716 4.9e-75 285.0 275 51.3
PSO357G0527 Papaver somniferum HOM05D006322 ORTHO05D007716 1.1e-74 283.9 226 58.8
Lsat_1_v5_gn_6_16821 Lactuca sativa HOM05D006322 ORTHO05D007716 1.4e-74 283.5 212 61.8
Hund11963 Selenicereus undatus HOM05D006322 ORTHO05D007716 1.9e-74 283.1 211 61.1
Cpa.g.sc9.74 Carica papaya HOM05D006322 ORTHO05D007716 2.4e-74 282.7 223 57.8
Aa31LG8G4030 Aethionema arabicum HOM05D006322 ORTHO05D007716 3.2e-74 282.3 222 57.7
AT3G16990 Arabidopsis thaliana HOM05D006322 ORTHO05D007716 1.2e-73 280.4 216 59.3
PSO170G6693 Papaver somniferum HOM05D006322 ORTHO05D007716 2.1e-73 279.6 225 58.2
Psat4g024280 Pisum sativum HOM05D006322 ORTHO05D007716 2.1e-73 279.6 218 60.1
AL3G29970 Arabidopsis lyrata HOM05D006322 ORTHO05D007716 3.5e-73 278.9 216 59.3
Sc25g0003310 Simmondsia chinensis HOM05D006322 ORTHO05D007716 3.5e-73 278.9 213 59.2
Dinv44297 Davidia involucrata HOM05D006322 ORTHO05D007716 4.6e-73 278.5 176 72.7
FAN07G2163 Fragaria x ananassa HOM05D006322 ORTHO05D007716 4.6e-73 278.5 214 61.2
Prupe.1G119400 Prunus persica HOM05D006322 ORTHO05D007716 4.6e-73 278.5 233 59.2
MD16G1155500 Malus domestica HOM05D006322 ORTHO05D007716 1.3e-72 276.9 228 57.0
HPP92_001241 Vanilla planifolia HOM05D006322 ORTHO05D007716 1.3e-72 276.9 218 56.4
Thhalv10021446m.g Eutrema salsugineum HOM05D006322 ORTHO05D007716 3.0e-72 275.8 222 56.3
ECA233G0552 Erigeron canadensis HOM05D006322 ORTHO05D007716 8.7e-72 274.2 214 58.4
ATR0796G257 Amborella trichopoda HOM05D006322 ORTHO05D007716 1.1e-71 273.9 220 57.3
C03p48530 Brassica napus HOM05D006322 ORTHO05D007716 1.5e-71 273.5 222 56.8
RcHm_v2.0_Chr4g0424801 Rosa chinensis HOM05D006322 ORTHO05D007716 1.9e-71 273.1 215 60.5
CARHR092240 Cardamine hirsuta HOM05D006322 ORTHO05D007716 2.5e-71 272.7 216 57.4
BcaB04g18916 Brassica carinata HOM05D006322 ORTHO05D007716 4.3e-71 271.9 222 56.8
BcaC01g03797 Brassica carinata HOM05D006322 ORTHO05D007716 4.3e-71 271.9 222 56.8
BolC3t17131H Brassica oleracea HOM05D006322 ORTHO05D007716 4.3e-71 271.9 222 56.8
Carub.0003s1674 Capsella rubella HOM05D006322 ORTHO05D007716 5.6e-71 271.6 214 58.4
BraA03t13148Z Brassica rapa HOM05D006322 ORTHO05D007716 8.1e-70 267.7 220 55.9
Os03g0306900 Oryza sativa ssp. japonica HOM05D006322 ORTHO05D007716 8.1e-70 267.7 210 57.1
A03p40000 Brassica napus HOM05D006322 ORTHO05D007716 3.1e-69 265.8 220 55.5
Zm00001eb396140 Zea mays HOM05D006322 ORTHO05D007716 3.4e-68 262.3 220 54.5
Sp3g15210 Schrenkiella parvula HOM05D006322 ORTHO05D007716 4.9e-67 258.5 215 54.9
CsaV3_6G022370 Cucumis sativus L. HOM05D006322 ORTHO05D007716 1.1e-66 257.3 207 59.4
MELO3C021273.2 Cucumis melo HOM05D006322 ORTHO05D007716 7.1e-66 254.6 209 59.3
CAN.G135.71 Capsicum annuum HOM05D006322 ORTHO05D007716 1.6e-65 253.4 174 64.9
Sed0017771 Sechium edule HOM05D006322 ORTHO05D007716 1.6e-65 253.4 207 58.9
ClCG06G004620 Citrullus lanatus HOM05D006322 ORTHO05D007716 2.7e-65 252.7 216 56.5
FAN12G2263 Fragaria x ananassa HOM05D006322 ORTHO05D007716 2.7e-65 252.7 197 61.4
BcaB04g18918 Brassica carinata HOM05D006322 ORTHO05D007716 1.0e-64 250.8 222 53.6
Actinidia27045 Actinidia chinensis HOM05D006322 ORTHO05D007716 7.4e-63 244.6 151 78.1
AUR62041396 Chenopodium quinoa HOM05D006322 ORTHO05D007716 1.6e-62 243.4 173 66.5
SEGI_24166 Sequoiadendron giganteum HOM05D006322 ORTHO05D007716 2.1e-62 243.0 221 51.1
SHI00180 Sapria himalayana HOM05D006322 ORTHO05D007716 6.2e-62 241.5 245 49.0
Ah.13g071980 Amaranthus hybridus HOM05D006322 ORTHO05D007716 1.8e-61 240.0 215 54.9
AUR62016124 Chenopodium quinoa HOM05D006322 ORTHO05D007716 3.1e-61 239.2 172 65.1
DCAR_030477 Daucus carota HOM05D006322 ORTHO05D007716 2.6e-60 236.1 214 51.9
FvH4_4g19550 Fragaria vesca HOM05D006322 ORTHO05D007716 5.1e-56 221.9 180 60.0
Peaxi162Scf00244g00510 Petunia axillaris HOM05D006322 ORTHO05D007716 1.1e-53 214.2 211 49.8
SMO116G0484 Selaginella moellendorffii HOM05D006322 ORTHO05D007716 4.5e-52 208.8 213 47.4
Solyc11g007560.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 5.8e-52 208.4 228 46.9
Nitab4.5_0001807g0070 Nicotiana tabacum HOM05D006322 ORTHO05D007716 7.6e-52 208.0 213 48.8
THA.LOC104802603 Tarenaya hassleriana HOM05D006322 ORTHO05D007716 1.7e-51 206.8 174 53.4
TAR362G0340 Trochodendron aralioides HOM05D006322 ORTHO05D007716 3.8e-51 205.7 214 47.7
CAN.G135.72 Capsicum annuum HOM05D006322 ORTHO05D007716 5.0e-51 205.3 214 47.7
Mapoly0003s0261 Marchantia polymorpha HOM05D006322 ORTHO05D007716 3.2e-50 202.6 221 43.0
TPR.G20694 Trifolium pratense HOM05D006322 ORTHO05D007716 3.5e-49 199.1 159 58.5
Pp3c10_15580 Physcomitrium patens HOM05D006322 ORTHO05D007716 6.1e-49 198.4 210 46.2
AagrBONN_evm.TU.Sc2ySwM_117.1930 Anthoceros agrestis HOM05D006322 ORTHO05D007716 8.7e-48 194.5 208 44.7
Lalb_Chr20g0120881 Lupinus albus HOM05D006322 ORTHO05D007716 4.1e-45 185.7 141 61.0
EL10Ac7g16563 Beta vulgaris HOM05D006322 ORTHO05D007716 9.0e-45 184.5 155 56.8
Actinidia15599 Actinidia chinensis HOM05D006322 ORTHO05D007716 5.9e-44 181.8 113 75.2
BcaB04g18915 Brassica carinata HOM05D001503 ORTHO05D003820 3.2e-42 176.0 178 49.4
PGSC0003DMG400040588 Solanum tuberosum HOM05D006322 ORTHO05D007716 7.2e-34 148.3 167 46.7
CBR_g45493 Chara braunii HOM05D006322 ORTHO05D007716 9.4e-26 121.3 220 30.5
Glyma.07G240701 Glycine max HOM05D006322 ORTHO05D007716 2.1e-25 120.2 112 53.6
Atru.chr4.3023 Acer truncatum HOM05D006322 ORTHO05D007716 2.7e-25 119.8 82 68.3
Cre09.g407600 Chlamydomonas reinhardtii HOM05D006322 ORTHO05D007716 5.9e-20 102.1 221 29.4
EL10Ac9g22265 Beta vulgaris HOM05D006322 ORTHO05D007716 1.3e-19 100.9 94 51.1
EL10Ac1g02106 Beta vulgaris HOM05D006322 ORTHO05D007716 4.4e-15 85.9 56 67.9
CANSAT54G0480 Cannabis sativa HOM05D006322 ORTHO05D007716 5.4e-13 79.0 93 47.3
CBR_g56708 Chara braunii HOM05D009436 ORTHO05D000048 1.7e-11 73.9 119 31.9
BcaB04g18920 Brassica carinata HOM05D006322 ORTHO05D007716 3.6e-09 66.2 54 53.7
Atru.chr4.2979 Acer truncatum HOM05D006322 ORTHO05D007716 4.0e-08 62.8 43 60.5
CAN.G94.6 Capsicum annuum HOM05D002740 ORTHO05D003126 2.6e-07 60.1 238 23.5
Os08g0566000 Oryza sativa ssp. japonica HOM05D002740 ORTHO05D003126 3.4e-07 59.7 231 23.4
MBI07_g08913_MAGBIO Magnolia biondii HOM05D004684 ORTHO05D006904 4.4e-07 59.3 226 23.0
Nn3g19799 Nelumbo nucifera HOM05D002740 ORTHO05D003126 4.4e-07 59.3 227 22.5
Nn1g02994 Nelumbo nucifera HOM05D002740 ORTHO05D003126 5.7e-07 58.9 236 22.9
arahy.Tifrunner.gnm1.ann1.JB472D Arachis hypogaea HOM05D002740 ORTHO05D003126 2.8e-06 56.6 228 23.2
arahy.Tifrunner.gnm1.ann1.33UQPP Arachis hypogaea HOM05D002740 ORTHO05D003126 3.7e-06 56.2 231 22.5
Aa31LG2G2010 Aethionema arabicum HOM05D002740 ORTHO05D003126 6.3e-06 55.5 105 30.5
Eucgr.H04213 Eucalyptus grandis HOM05D002740 ORTHO05D003126 6.3e-06 55.5 228 22.8
Lj5g0022875 Lotus japonicus HOM05D002740 ORTHO05D003126 6.3e-06 55.5 236 21.6
RcHm_v2.0_Chr3g0449211 Rosa chinensis HOM05D002740 ORTHO05D003126 6.3e-06 55.5 227 23.8


User provided reference genes

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