Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08031 Vaccinium macrocarpon HOM05D004819 ORTHO05D005654 7.9e-146 520.4 258 100.0
Rhsim04G0240100 Rhododendron simsii HOM05D004819 ORTHO05D005654 6.9e-49 198.4 229 50.7
Oeu052162.4 Olea europaea HOM05D004819 ORTHO05D005654 2.6e-48 196.4 225 49.8
Dinv15153 Davidia involucrata HOM05D004819 ORTHO05D005654 9.3e-46 188.0 229 46.3
Actinidia40384 Actinidia chinensis HOM05D004819 ORTHO05D005654 7.9e-45 184.9 228 48.2
CSS0034063 Camellia sinensis var. sinensis HOM05D004819 ORTHO05D005654 1.1e-43 181.0 228 46.9
Manes.15G000800 Manihot esculenta HOM05D004819 ORTHO05D005654 3.3e-43 179.5 221 46.2
GSVIVG01034978001 Vitis vinifera HOM05D004819 ORTHO05D005654 3.3e-43 179.5 228 43.9
TAR365G0460 Trochodendron aralioides HOM05D004819 ORTHO05D005654 4.3e-43 179.1 228 46.5
Glyma.17G034800 Glycine max HOM05D004819 ORTHO05D005654 1.6e-42 177.2 221 45.2
MD16G1152500 Malus domestica HOM05D004819 ORTHO05D005654 3.7e-42 176.0 216 45.4
Lj4g0007943 Lotus japonicus HOM05D004819 ORTHO05D005654 4.8e-42 175.6 217 46.5
RcHm_v2.0_Chr4g0425571 Rosa chinensis HOM05D004819 ORTHO05D005654 6.3e-42 175.3 227 43.6
Ca_21436_v3 Cicer arietinum L. HOM05D004819 ORTHO05D005654 1.1e-41 174.5 221 43.4
Nn2g14951 Nelumbo nucifera HOM05D004819 ORTHO05D005654 1.4e-41 174.1 223 43.9
Phvul.003G115600 Phaseolus vulgaris HOM05D004819 ORTHO05D005654 3.1e-41 172.9 217 45.2
TPR.G25430 Trifolium pratense HOM05D004819 ORTHO05D005654 3.1e-41 172.9 218 43.6
Atru.chr4.3039 Acer truncatum HOM05D004819 ORTHO05D005654 5.3e-41 172.2 222 44.6
FAN07G2526 Fragaria x ananassa HOM05D004819 ORTHO05D005654 5.3e-41 172.2 227 43.2
Lj3C833T2 Lonicera japonica HOM05D004819 ORTHO05D005654 6.9e-41 171.8 221 45.7
Manes.03G205800 Manihot esculenta HOM05D004819 ORTHO05D005654 6.9e-41 171.8 220 44.5
DCAR_030463 Daucus carota HOM05D004819 ORTHO05D005654 1.5e-40 170.6 214 43.9
Glyma.07G238900 Glycine max HOM05D004819 ORTHO05D005654 1.5e-40 170.6 221 43.9
arahy.Tifrunner.gnm1.ann1.ZA4S8T Arachis hypogaea HOM05D004819 ORTHO05D005654 4.5e-40 169.1 224 45.5
FvH4_4g19930 Fragaria vesca HOM05D004819 ORTHO05D005654 7.7e-40 168.3 217 43.3
FAN12G0990 Fragaria x ananassa HOM05D004819 ORTHO05D005654 7.7e-40 168.3 217 43.3
Psat4g022840 Pisum sativum HOM05D004819 ORTHO05D005654 7.7e-40 168.3 218 44.0
Haze_01312 Corylus avellana HOM05D004819 ORTHO05D005654 1.0e-39 167.9 223 43.5
Migut.G00071 Erythranthe guttata HOM05D004819 ORTHO05D005654 1.7e-39 167.2 222 42.8
Lalb_Chr07g0182051 Lupinus albus HOM05D004819 ORTHO05D005654 1.7e-39 167.2 215 44.2
arahy.Tifrunner.gnm1.ann1.HD9JLY Arachis hypogaea HOM05D004819 ORTHO05D005654 2.2e-39 166.8 224 45.1
Sabra10G0113000 Salix brachista HOM05D004819 ORTHO05D005654 2.9e-39 166.4 218 43.1
Cfa015302 Carpinus fangiana HOM05D004819 ORTHO05D005654 3.8e-39 166.0 213 42.7
Lsat_1_v5_gn_6_1101 Lactuca sativa HOM05D004819 ORTHO05D005654 3.8e-39 166.0 222 42.8
Prupe.1G115700 Prunus persica HOM05D004819 ORTHO05D005654 5.0e-39 165.6 216 43.1
TWI09G1587 Tripterygium wilfordii HOM05D004819 ORTHO05D005654 8.5e-39 164.9 234 42.3
Oeu046577.1 Olea europaea HOM05D004819 ORTHO05D005654 3.2e-38 162.9 225 42.2
PGR004G0637 Punica granatum HOM05D004819 ORTHO05D005654 7.2e-38 161.8 218 43.6
Lsat_1_v5_gn_1_41600 Lactuca sativa HOM05D004819 ORTHO05D005654 9.4e-38 161.4 224 41.5
QL06p012610 Quercus lobata HOM05D004819 ORTHO05D005654 9.4e-38 161.4 222 42.8
Duzib212G0926 Durio zibethinus HOM05D004819 ORTHO05D005654 3.6e-37 159.5 223 42.2
Nitab4.5_0000931g0050 Nicotiana tabacum HOM05D004819 ORTHO05D005654 3.6e-37 159.5 220 42.3
PSO210G2958 Papaver somniferum HOM05D004819 ORTHO05D005654 4.6e-37 159.1 216 41.2
EL10Ac3g05522 Beta vulgaris HOM05D004819 ORTHO05D005654 6.1e-37 158.7 219 40.6
MSTRG.10156 Avicennia marina HOM05D004819 ORTHO05D005654 1.0e-36 157.9 222 41.9
PSO761G0636 Papaver somniferum HOM05D004819 ORTHO05D005654 1.0e-36 157.9 216 40.7
CsaV3_3G015230 Cucumis sativus L. HOM05D004819 ORTHO05D005654 1.4e-36 157.5 228 41.7
Eucgr.H04055 Eucalyptus grandis HOM05D004819 ORTHO05D005654 1.4e-36 157.5 217 41.9
Potri.010G146800 Populus trichocarpa HOM05D004819 ORTHO05D005654 1.4e-36 157.5 218 41.3
Hund03132 Selenicereus undatus HOM05D004819 ORTHO05D005654 1.8e-36 157.1 214 41.6
Sed0001798 Sechium edule HOM05D004819 ORTHO05D005654 3.0e-36 156.4 216 40.3
ECA233G5711 Erigeron canadensis HOM05D004819 ORTHO05D005654 3.9e-36 156.0 211 41.2
Cpa.g.sc9.47 Carica papaya HOM05D004819 ORTHO05D005654 5.1e-36 155.6 218 42.7
VMungo1215G1911 Vigna mungo HOM05D004819 ORTHO05D005654 5.1e-36 155.6 202 43.1
CANSAT78G1713 Cannabis sativa HOM05D004819 ORTHO05D005654 6.7e-36 155.2 222 41.4
MELO3C006720.2 Cucumis melo HOM05D004819 ORTHO05D005654 6.7e-36 155.2 228 41.2
Solyc01g058730.4 Solanum lycopersicum HOM05D004819 ORTHO05D005654 6.7e-36 155.2 220 40.9
Sopen01g024570 Solanum pennellii HOM05D004819 ORTHO05D005654 6.7e-36 155.2 220 40.9
SGA_v2.0_scaffold104G30069 Striga asiatica HOM05D004819 ORTHO05D005654 6.7e-36 155.2 218 41.7
THA.LOC104802608 Tarenaya hassleriana HOM05D004819 ORTHO05D005654 8.8e-36 154.8 219 41.1
Aqoxy2G02702 Aquilegia oxysepala HOM05D004819 ORTHO05D005654 1.1e-35 154.5 212 40.6
Ciclev10004336m.g Citrus clementina HOM05D004819 ORTHO05D005654 1.1e-35 154.5 217 41.5
Zm00001eb014900 Zea mays HOM05D004819 ORTHO05D005654 1.1e-35 154.5 226 38.1
COL.COLO4_34600 Corchorus olitorius HOM05D004819 ORTHO05D005654 1.5e-35 154.1 223 40.8
ClCG05G006610 Citrullus lanatus HOM05D004819 ORTHO05D005654 3.3e-35 152.9 229 39.7
SalBow8G2376 Salvia bowleyana HOM05D004819 ORTHO05D005654 5.7e-35 152.1 222 41.0
Sc09g0007260 Simmondsia chinensis HOM05D004819 ORTHO05D005654 7.4e-35 151.8 231 39.0
unitig_88.g27704 Utricularia gibba HOM05D002812 ORTHO05D005654 7.4e-35 151.8 208 40.4
PGSC0003DMG400001205 Solanum tuberosum HOM05D004819 ORTHO05D005654 9.7e-35 151.4 220 40.5
Thecc.04G302500 Theobroma cacao HOM05D004819 ORTHO05D005654 2.2e-34 150.2 223 40.4
GSVIVG01034925001 Vitis vinifera HOM05D004819 ORTHO05D005654 2.8e-34 149.8 195 41.0
AUR62016223 Chenopodium quinoa HOM05D004819 ORTHO05D005654 4.8e-34 149.1 220 38.6
Gohir.D10G179600 Gossypium hirsutum HOM05D004819 ORTHO05D005654 4.8e-34 149.1 223 39.9
Gorai.011G200900 Gossypium raimondii HOM05D004819 ORTHO05D005654 4.8e-34 149.1 223 39.9
AUR62039265 Chenopodium quinoa HOM05D004819 ORTHO05D005654 2.4e-33 146.7 215 37.7
Peaxi162Scf00228g00333 Petunia axillaris HOM05D004819 ORTHO05D005654 3.1e-33 146.4 216 40.7
HanXRQChr11g0353871 Helianthus annuus HOM05D004819 ORTHO05D005654 4.1e-33 146.0 217 39.2
ATR0693G033 Amborella trichopoda HOM05D004819 ORTHO05D005654 6.9e-33 145.2 215 35.3
Gohir.A10G173100 Gossypium hirsutum HOM05D004819 ORTHO05D005654 1.5e-32 144.1 223 38.6
BcaC06g32994 Brassica carinata HOM05D004819 ORTHO05D005654 5.9e-32 142.1 227 38.3
BcaC09g50317 Brassica carinata HOM05D004819 ORTHO05D005654 5.9e-32 142.1 227 38.3
C01p26720 Brassica napus HOM05D004819 ORTHO05D005654 5.9e-32 142.1 227 38.3
Sp7g14690 Schrenkiella parvula HOM05D004819 ORTHO05D005654 5.9e-32 142.1 227 37.9
BolC1t02613H Brassica oleracea HOM05D004819 ORTHO05D005654 7.7e-32 141.7 227 38.3
BraA01t02042Z Brassica rapa HOM05D004819 ORTHO05D005654 1.0e-31 141.4 218 39.0
SHI00126 Sapria himalayana HOM05D004819 ORTHO05D005654 1.0e-31 141.4 223 35.9
C07p47720 Brassica napus HOM05D004819 ORTHO05D005654 1.7e-31 140.6 223 39.5
Thhalv10024420m.g Eutrema salsugineum HOM05D004819 ORTHO05D005654 2.2e-31 140.2 227 37.9
Sed0007022 Sechium edule HOM05D004819 ORTHO05D005654 2.2e-31 140.2 217 37.8
A01p21370 Brassica napus HOM05D004819 ORTHO05D005654 3.8e-31 139.4 227 37.9
BcaC06g33458 Brassica carinata HOM05D004819 ORTHO05D005654 6.5e-31 138.7 223 39.0
A03p49650 Brassica napus HOM05D004819 ORTHO05D005654 6.5e-31 138.7 232 37.9
BolC7t45297H Brassica oleracea HOM05D004819 ORTHO05D005654 6.5e-31 138.7 223 39.0
BraA03t14064Z Brassica rapa HOM05D004819 ORTHO05D005654 6.5e-31 138.7 232 37.9
Cc03_g00710 Coffea canephora HOM05D004819 ORTHO05D005654 8.5e-31 138.3 204 38.7
BcaNung00215 Brassica carinata HOM05D004819 ORTHO05D005654 1.1e-30 137.9 217 38.7
AL7G38910 Arabidopsis lyrata HOM05D004819 ORTHO05D005654 4.2e-30 136.0 224 37.5
Actinidia18457 Actinidia chinensis HOM05D004819 ORTHO05D005654 5.5e-30 135.6 87 72.4
AT4G16180 Arabidopsis thaliana HOM05D004819 ORTHO05D005654 7.2e-30 135.2 224 37.1
Carub.0007s2536 Capsella rubella HOM05D004819 ORTHO05D005654 7.2e-30 135.2 224 37.1
Aa31LG10G5910 Aethionema arabicum HOM05D004819 ORTHO05D005654 9.4e-30 134.8 225 36.0
CARHR222550 Cardamine hirsuta HOM05D004819 ORTHO05D005654 2.1e-29 133.7 219 37.9
TWI53G0610 Tripterygium wilfordii HOM05D004819 ORTHO05D005654 6.7e-28 128.6 69 78.3
GSVIVG01034917001 Vitis vinifera HOM05D004819 ORTHO05D005654 6.7e-28 128.6 70 77.1
Ah.05g176730 Amaranthus hybridus HOM05D004819 ORTHO05D005654 4.4e-27 125.9 69 79.7
AagrBONN_evm.TU.Sc2ySwM_362.583 Anthoceros agrestis HOM05D004819 ORTHO05D005654 9.7e-27 124.8 219 33.8
HanXRQChr02g0048601 Helianthus annuus HOM05D004819 ORTHO05D005654 2.2e-26 123.6 216 36.6
CDE02G0522 Ceratophyllum demersum HOM05D004819 ORTHO05D005654 8.2e-26 121.7 69 71.0
CiPaw.01G137100 Carya illinoinensis HOM05D004819 ORTHO05D005654 9.1e-25 118.2 215 34.4
Mapoly0066s0100 Marchantia polymorpha HOM05D004819 ORTHO05D005654 5.0e-23 112.5 205 31.2
Pp3c5_14560 Physcomitrium patens HOM05D004819 ORTHO05D005654 5.0e-23 112.5 216 31.9
Pp3c16_6520 Physcomitrium patens HOM05D004819 ORTHO05D005654 1.9e-22 110.5 223 32.3
SMO298G0056 Selaginella moellendorffii HOM05D004819 ORTHO05D005654 4.4e-19 99.4 219 30.6
ECA234G0649 Erigeron canadensis HOM05D004819 ORTHO05D005654 5.7e-19 99.0 64 70.3
Nn4g25546 Nelumbo nucifera HOM05D004819 ORTHO05D005654 1.6e-16 90.9 55 74.5
CBR_g61507 Chara braunii HOM05D004819 ORTHO05D005654 4.5e-16 89.4 69 53.6
HPP92_005423 Vanilla planifolia HOM05D004819 ORTHO05D005654 3.0e-12 76.6 224 29.5
MCO15G339 Micromonas commoda HOM05D004819 ORTHO05D005654 5.7e-11 72.4 61 52.5
vmacro10225 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 1.0e-07 61.6 31 100.0


User provided reference genes

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