Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07907 Vaccinium macrocarpon HOM05D007306 ORTHO05D009112 1.7e-64 249.2 128 100.0
Rhsim03G0005900 Rhododendron simsii HOM05D007306 ORTHO05D009112 8.4e-48 193.7 129 82.2
Actinidia32393 Actinidia chinensis HOM05D007306 ORTHO05D009112 1.1e-34 150.2 133 62.4
Dinv14300 Davidia involucrata HOM05D007306 ORTHO05D009112 9.1e-34 147.1 144 59.0
Actinidia22036 Actinidia chinensis HOM05D007306 ORTHO05D009112 2.0e-33 146.0 136 62.5
Nitab4.5_0001137g0060 Nicotiana tabacum HOM05D007306 ORTHO05D009112 2.9e-32 142.1 134 59.7
Peaxi162Scf00258g00720 Petunia axillaris HOM05D007306 ORTHO05D009112 1.1e-31 140.2 135 60.0
QL07p023738 Quercus lobata HOM05D007306 ORTHO05D009112 1.9e-31 139.4 139 59.7
Nitab4.5_0007619g0010 Nicotiana tabacum HOM05D007306 ORTHO05D009112 3.2e-31 138.7 137 58.4
Hma1.2p1_0386F.1_g141880 Hydrangea macrophylla HOM05D007306 ORTHO05D009112 4.2e-31 138.3 140 57.9
Cpa.g.sc85.66 Carica papaya HOM05D007306 ORTHO05D009112 5.1e-29 131.3 130 60.0
TAR623G0307 Trochodendron aralioides HOM05D007306 ORTHO05D009112 2.2e-27 125.9 142 55.6
Thecc.05G171400 Theobroma cacao HOM05D007306 ORTHO05D009112 8.2e-27 124.0 151 49.0
Nn2g15686 Nelumbo nucifera HOM05D007306 ORTHO05D009112 1.1e-26 123.6 134 51.5
CANSAT64G1677 Cannabis sativa HOM05D007306 ORTHO05D009112 1.4e-26 123.2 142 52.1
Cc06_g15870 Coffea canephora HOM05D007306 ORTHO05D009112 3.1e-26 122.1 151 47.7
COL.COLO4_33982 Corchorus olitorius HOM05D007306 ORTHO05D009112 3.1e-26 122.1 155 52.9
CiPaw.09G030300 Carya illinoinensis HOM05D007306 ORTHO05D009112 4.1e-26 121.7 145 52.4
MD14G1057700 Malus domestica HOM05D007306 ORTHO05D009112 4.1e-26 121.7 141 55.3
Cfa020165 Carpinus fangiana HOM05D007306 ORTHO05D009112 9.1e-26 120.6 148 51.4
Potri.006G192500 Populus trichocarpa HOM05D007306 ORTHO05D009112 9.1e-26 120.6 145 51.0
Prupe.7G077000 Prunus persica HOM05D007306 ORTHO05D009112 9.1e-26 120.6 142 52.8
CiPaw.10G026400 Carya illinoinensis HOM05D007306 ORTHO05D009112 1.2e-25 120.2 142 50.7
Atru.chr8.1112 Acer truncatum HOM05D007306 ORTHO05D009112 1.5e-25 119.8 135 51.1
Phvul.007G259800 Phaseolus vulgaris HOM05D007306 ORTHO05D009112 1.5e-25 119.8 128 55.5
Aqoxy1G00127 Aquilegia oxysepala HOM05D007306 ORTHO05D009112 2.0e-25 119.4 144 52.1
Duzib093G0428 Durio zibethinus HOM05D007306 ORTHO05D009112 2.0e-25 119.4 141 48.2
Gohir.A01G191300 Gossypium hirsutum HOM05D007306 ORTHO05D009112 2.0e-25 119.4 145 50.3
Gorai.002G224300 Gossypium raimondii HOM05D007306 ORTHO05D009112 2.0e-25 119.4 145 50.3
MD12G1057100 Malus domestica HOM05D007306 ORTHO05D009112 2.0e-25 119.4 146 52.7
SalBow6G0438 Salvia bowleyana HOM05D007306 ORTHO05D009112 2.0e-25 119.4 133 53.4
SalBow6G2293 Salvia bowleyana HOM05D007306 ORTHO05D009112 2.0e-25 119.4 133 53.4
arahy.Tifrunner.gnm1.ann1.I9AM74 Arachis hypogaea HOM05D007306 ORTHO05D009112 3.5e-25 118.6 145 52.4
PGR004G2053 Punica granatum HOM05D007306 ORTHO05D009112 4.5e-25 118.2 138 52.9
Potri.016G045700 Populus trichocarpa HOM05D007306 ORTHO05D009112 7.7e-25 117.5 145 49.0
arahy.Tifrunner.gnm1.ann1.T0JWFY Arachis hypogaea HOM05D007306 ORTHO05D009112 1.0e-24 117.1 145 52.4
Oeu063786.1 Olea europaea HOM05D007306 ORTHO05D009112 1.0e-24 117.1 123 55.3
Gohir.D01G178600 Gossypium hirsutum HOM05D007306 ORTHO05D009112 1.3e-24 116.7 145 49.7
TWI74G1393 Tripterygium wilfordii HOM05D007306 ORTHO05D009112 1.3e-24 116.7 127 52.8
Migut.J01836 Erythranthe guttata HOM05D007306 ORTHO05D009112 2.2e-24 115.9 137 50.4
Manes.08G044500 Manihot esculenta HOM05D007306 ORTHO05D009112 8.5e-24 114.0 148 48.6
ClCG10G017530 Citrullus lanatus HOM05D007306 ORTHO05D009112 1.5e-23 113.2 136 49.3
HanXRQChr13g0390881 Helianthus annuus HOM05D007306 ORTHO05D009112 1.5e-23 113.2 130 50.0
PGSC0003DMG400002614 Solanum tuberosum HOM05D007306 ORTHO05D009112 2.5e-23 112.5 122 54.9
SGA_v2.0_scaffold69G23062 Striga asiatica HOM05D007306 ORTHO05D009112 2.5e-23 112.5 123 54.5
CsaV3_3G038820 Cucumis sativus L. HOM05D007306 ORTHO05D009112 3.2e-23 112.1 139 48.2
Lsat_1_v5_gn_5_163480 Lactuca sativa HOM05D007306 ORTHO05D009112 3.2e-23 112.1 147 50.3
Solyc03g120950.3 Solanum lycopersicum HOM05D007306 ORTHO05D009112 3.2e-23 112.1 122 54.1
Sopen03g039780 Solanum pennellii HOM05D007306 ORTHO05D009112 3.2e-23 112.1 122 54.1
Sed0004413 Sechium edule HOM05D007306 ORTHO05D009112 5.5e-23 111.3 130 53.1
Psat3g068560 Pisum sativum HOM05D007306 ORTHO05D009112 9.4e-23 110.5 132 53.8
CAN.G1143.4 Capsicum annuum HOM05D007306 ORTHO05D009112 3.6e-22 108.6 133 53.4
MELO3C009626.2 Cucumis melo HOM05D007306 ORTHO05D009112 3.6e-22 108.6 137 48.9
Lj1g0014955 Lotus japonicus HOM05D007306 ORTHO05D009112 6.1e-22 107.8 131 53.4
FvH4_6g22320 Fragaria vesca HOM05D007306 ORTHO05D009112 1.0e-21 107.1 142 47.9
FAN05G3567 Fragaria x ananassa HOM05D007306 ORTHO05D009112 1.0e-21 107.1 142 47.9
RcHm_v2.0_Chr3g0479681 Rosa chinensis HOM05D007306 ORTHO05D009112 1.8e-21 106.3 139 48.2
FAN14G0362 Fragaria x ananassa HOM05D007306 ORTHO05D009112 2.3e-21 105.9 145 47.6
AT2G42110 Arabidopsis thaliana HOM05D007306 ORTHO05D009112 3.0e-21 105.5 134 46.3
Ciclev10013031m.g Citrus clementina HOM05D007306 ORTHO05D009112 3.0e-21 105.5 147 45.6
Glyma.09G111500 Glycine max HOM05D007306 ORTHO05D009112 3.0e-21 105.5 132 51.5
MSTRG.19909 Avicennia marina HOM05D007306 ORTHO05D009112 5.2e-21 104.8 139 51.1
Manes.09G035400 Manihot esculenta HOM05D007306 ORTHO05D009112 5.2e-21 104.8 130 50.8
Lalb_Chr18g0047871 Lupinus albus HOM05D007306 ORTHO05D009112 1.1e-20 103.6 131 48.9
TPR.G22157 Trifolium pratense HOM05D007306 ORTHO05D009112 1.1e-20 103.6 132 50.0
VMungo0720G2523 Vigna mungo HOM05D007306 ORTHO05D009112 1.1e-20 103.6 122 48.4
CARHR137170 Cardamine hirsuta HOM05D007306 ORTHO05D009112 2.0e-20 102.8 133 47.4
FAN09G2453 Fragaria x ananassa HOM05D007306 ORTHO05D009112 2.0e-20 102.8 140 46.4
Phvul.001G142300 Phaseolus vulgaris HOM05D007306 ORTHO05D009112 2.6e-20 102.4 128 52.3
AL4G40480 Arabidopsis lyrata HOM05D007306 ORTHO05D009112 3.3e-20 102.1 131 47.3
BcaNung04408 Brassica carinata HOM05D007306 ORTHO05D009112 3.3e-20 102.1 135 45.9
PSO339G5155 Papaver somniferum HOM05D007306 ORTHO05D009112 4.4e-20 101.7 138 47.8
VMungo1383G3094 Vigna mungo HOM05D007306 ORTHO05D009112 4.4e-20 101.7 129 53.5
Medtr7g093220 Medicago truncatula HOM05D007306 ORTHO05D009112 5.7e-20 101.3 131 49.6
A05p02730 Brassica napus HOM05D007306 ORTHO05D009112 7.4e-20 100.9 136 45.6
BraA05t19265Z Brassica rapa HOM05D007306 ORTHO05D009112 7.4e-20 100.9 136 45.6
DCAR_017009 Daucus carota HOM05D004472 ORTHO05D007169 7.4e-20 100.9 132 43.2
PSO384G4645 Papaver somniferum HOM05D007306 ORTHO05D009112 7.4e-20 100.9 138 47.8
ECA248G3448 Erigeron canadensis HOM05D007306 ORTHO05D009112 1.3e-19 100.1 140 45.0
FAN02G3291 Fragaria x ananassa HOM05D007306 ORTHO05D009112 1.3e-19 100.1 140 45.7
Aa31LG1G24110 Aethionema arabicum HOM05D007306 ORTHO05D009112 2.8e-19 99.0 137 45.3
C04p03260 Brassica napus HOM05D007306 ORTHO05D009112 2.8e-19 99.0 130 46.2
Glyma.03G144700 Glycine max HOM05D007306 ORTHO05D009112 2.8e-19 99.0 132 50.0
Sabra16G0049700 Salix brachista HOM05D007306 ORTHO05D009112 2.8e-19 99.0 102 54.9
Hund24792 Selenicereus undatus HOM05D007306 ORTHO05D009112 2.8e-19 99.0 154 47.4
BcaC02g12458 Brassica carinata HOM05D007306 ORTHO05D009112 3.7e-19 98.6 130 46.2
BcaC02g12459 Brassica carinata HOM05D007306 ORTHO05D009112 3.7e-19 98.6 130 46.2
BolC4t21964H Brassica oleracea HOM05D007306 ORTHO05D009112 3.7e-19 98.6 130 46.2
Thhalv10017403m.g Eutrema salsugineum HOM05D007306 ORTHO05D009112 8.2e-19 97.4 130 45.4
Carub.0004s2445 Capsella rubella HOM05D007306 ORTHO05D009112 1.4e-18 96.7 139 42.4
Sp4g24320 Schrenkiella parvula HOM05D007306 ORTHO05D009112 5.3e-18 94.7 131 43.5
Duzib106G0602 Durio zibethinus HOM05D007306 ORTHO05D009112 7.0e-18 94.4 143 42.0
MBI06_g29488_MAGBIO Magnolia biondii HOM05D007306 ORTHO05D009112 1.2e-17 93.6 128 46.9
GSVIVG01033497001 Vitis vinifera HOM05D007306 ORTHO05D009112 1.7e-16 89.7 128 43.8
AUR62012035 Chenopodium quinoa HOM05D007306 ORTHO05D009112 1.1e-15 87.0 139 44.6
Glyma.19G147700 Glycine max HOM05D007306 ORTHO05D009112 1.5e-15 86.7 124 47.6
THA.LOC104802563 Tarenaya hassleriana HOM05D007306 ORTHO05D009112 1.8e-13 79.7 131 39.7
AUR62015369 Chenopodium quinoa HOM05D007306 ORTHO05D009112 2.6e-12 75.9 158 40.5
Sc19g0007100 Simmondsia chinensis HOM05D007306 ORTHO05D009112 9.8e-12 73.9 85 49.4
CSS0009036 Camellia sinensis var. sinensis HOM05D007306 ORTHO05D009112 1.1e-10 70.5 94 45.7
ATR0807G086 Amborella trichopoda HOM05D007306 ORTHO05D009112 2.4e-10 69.3 134 38.8
CDE02G0820 Ceratophyllum demersum HOM05D007306 ORTHO05D009112 2.4e-10 69.3 132 37.9
Ca_08521_v3 Cicer arietinum L. HOM05D007306 ORTHO05D009112 3.1e-10 68.9 108 47.2
EL10Ac3g06917 Beta vulgaris HOM05D007306 ORTHO05D009112 1.6e-09 66.6 168 29.8
unitig_22.g6026 Utricularia gibba HOM05D007306 ORTHO05D009112 4.5e-09 65.1 124 37.9
Ah.04g152480 Amaranthus hybridus HOM05D007306 ORTHO05D009112 5.9e-09 64.7 168 33.9
Sed0003989 Sechium edule HOM05D007306 ORTHO05D009112 1.1e-07 60.5 96 42.7


User provided reference genes

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