Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07900 Vaccinium macrocarpon HOM05D005841 ORTHO05D007132 6.9e-204 713.8 364 100.0
Rhsim03G0005600 Rhododendron simsii HOM05D005841 ORTHO05D007132 3.7e-189 664.8 364 92.3
CSS0015441 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 9.4e-177 623.6 363 85.4
Dinv24065 Davidia involucrata HOM05D005841 ORTHO05D007132 1.0e-167 593.6 365 80.8
Actinidia22040 Actinidia chinensis HOM05D005841 ORTHO05D007132 8.8e-167 590.5 349 85.4
Dinv14310 Davidia involucrata HOM05D005841 ORTHO05D007132 7.5e-166 587.4 364 80.8
Sabra01G0025200 Salix brachista HOM05D005841 ORTHO05D007132 5.0e-154 548.1 361 75.9
Atru.chr12.1096 Acer truncatum HOM05D005841 ORTHO05D007132 2.5e-153 545.8 363 75.2
Potri.003G189400 Populus trichocarpa HOM05D005841 ORTHO05D007132 5.5e-153 544.7 363 74.4
Potri.001G036400 Populus trichocarpa HOM05D005841 ORTHO05D007132 2.8e-152 542.3 361 74.2
Manes.04G153300 Manihot esculenta HOM05D005841 ORTHO05D007132 2.0e-150 536.2 381 70.6
CiPaw.14G011500 Carya illinoinensis HOM05D005841 ORTHO05D007132 4.4e-150 535.0 412 68.0
Lju124A25T34 Lonicera japonica HOM05D005841 ORTHO05D007132 5.7e-150 534.6 359 76.0
QL04p022932 Quercus lobata HOM05D005841 ORTHO05D007132 5.7e-150 534.6 403 67.2
MSTRG.19910 Avicennia marina HOM05D005841 ORTHO05D007132 1.1e-148 530.4 356 73.9
DCAR_019783 Daucus carota HOM05D005841 ORTHO05D007132 2.4e-148 529.3 360 73.9
Glyma.04G125600 Glycine max HOM05D005841 ORTHO05D007132 3.1e-148 528.9 362 72.9
Gohir.A06G171000 Gossypium hirsutum HOM05D005841 ORTHO05D007132 5.9e-147 524.6 362 72.7
Glyma.06G313000 Glycine max HOM05D005841 ORTHO05D007132 1.0e-146 523.9 362 72.4
Sabra03G0139600 Salix brachista HOM05D005841 ORTHO05D007132 1.3e-146 523.5 349 74.8
COL.COLO4_09288 Corchorus olitorius HOM05D005841 ORTHO05D007132 2.9e-146 522.3 362 72.7
PSO339G0077 Papaver somniferum HOM05D005841 ORTHO05D007132 2.9e-146 522.3 358 71.8
VMungo1080G1721 Vigna mungo HOM05D005841 ORTHO05D007132 5.0e-146 521.5 362 71.8
Oeu007758.1 Olea europaea HOM05D005841 ORTHO05D007132 6.6e-146 521.2 357 73.4
Phvul.005G012800 Phaseolus vulgaris HOM05D005841 ORTHO05D007132 6.6e-146 521.2 362 71.5
Thecc.10G128400 Theobroma cacao HOM05D005841 ORTHO05D007132 6.6e-146 521.2 362 71.5
Gohir.D06G178900 Gossypium hirsutum HOM05D005841 ORTHO05D007132 1.5e-145 520.0 362 72.1
Ciclev10001427m.g Citrus clementina HOM05D005841 ORTHO05D007132 2.5e-145 519.2 391 67.5
Lj3g0005753 Lotus japonicus HOM05D005841 ORTHO05D007132 2.5e-145 519.2 358 72.1
PSO384G2928 Papaver somniferum HOM05D005841 ORTHO05D007132 2.5e-145 519.2 358 71.5
Peaxi162Scf00258g00731 Petunia axillaris HOM05D005841 ORTHO05D007132 4.3e-145 518.5 408 65.7
Haze_02951 Corylus avellana HOM05D005841 ORTHO05D007132 5.6e-145 518.1 458 61.1
Gorai.010G208800 Gossypium raimondii HOM05D005841 ORTHO05D007132 9.5e-145 517.3 362 71.8
Medtr3g011510 Medicago truncatula HOM05D005841 ORTHO05D007132 1.2e-144 516.9 359 71.9
Nitab4.5_0000324g0020 Nicotiana tabacum HOM05D005841 ORTHO05D007132 2.8e-144 515.8 406 65.8
Duzib128G0994 Durio zibethinus HOM05D005841 ORTHO05D007132 3.6e-144 515.4 362 71.3
Nitab4.5_0004458g0010 Nicotiana tabacum HOM05D005841 ORTHO05D007132 1.0e-143 513.8 406 65.3
Sc20g0000960 Simmondsia chinensis HOM05D005841 ORTHO05D007132 1.0e-143 513.8 362 71.3
Lalb_Chr18g0048171 Lupinus albus HOM05D005841 ORTHO05D007132 1.8e-143 513.1 363 71.1
THA.LOC104809184 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 2.3e-143 512.7 361 69.5
Cc06_g15810 Coffea canephora HOM05D005841 ORTHO05D007132 3.1e-143 512.3 368 69.8
TWI38G1535 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 1.5e-142 510.0 358 71.5
TPR.G5121 Trifolium pratense HOM05D005841 ORTHO05D007132 1.1e-140 503.8 396 66.7
Ca_26913_v3 Cicer arietinum L. HOM05D005841 ORTHO05D007132 3.2e-140 502.3 345 72.5
THA.LOC104824200 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 2.0e-139 499.6 363 70.0
Lsat_1_v5_gn_5_163601 Lactuca sativa HOM05D005841 ORTHO05D007132 3.5e-139 498.8 407 63.6
TWI15G0221 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 4.6e-139 498.4 364 69.0
ECA248G0891 Erigeron canadensis HOM05D005841 ORTHO05D007132 1.7e-138 496.5 415 62.7
arahy.Tifrunner.gnm1.ann1.AX9XXP Arachis hypogaea HOM05D005841 ORTHO05D007132 2.3e-138 496.1 373 67.8
MSTRG.26082 Avicennia marina HOM05D005841 ORTHO05D007132 8.6e-138 494.2 375 68.0
GSVIVG01027370001 Vitis vinifera HOM05D005841 ORTHO05D007132 8.6e-138 494.2 367 69.5
Aa31sc488G20 Aethionema arabicum HOM05D005841 ORTHO05D007132 7.3e-137 491.1 356 69.1
unitig_699.g19444 Utricularia gibba HOM05D005841 ORTHO05D007132 1.8e-135 486.5 357 67.8
PGSC0003DMG400023670 Solanum tuberosum HOM05D005841 ORTHO05D007132 8.9e-135 484.2 423 61.0
Eucgr.G03178 Eucalyptus grandis HOM05D005841 ORTHO05D007132 2.0e-134 483.0 405 62.7
EL10Ac9g20941 Beta vulgaris HOM05D005841 ORTHO05D007132 5.8e-134 481.5 342 69.0
Hund07799 Selenicereus undatus HOM05D005841 ORTHO05D007132 1.3e-133 480.3 358 67.6
HanXRQChr13g0390471 Helianthus annuus HOM05D005841 ORTHO05D007132 1.7e-133 479.9 325 73.2
CANSAT56G0667 Cannabis sativa HOM05D005841 ORTHO05D007132 4.9e-133 478.4 383 63.7
Sopen10g031070 Solanum pennellii HOM05D005841 ORTHO05D007132 4.1e-132 475.3 448 58.3
MELO3C011778.2 Cucumis melo HOM05D005841 ORTHO05D007132 1.2e-131 473.8 398 61.6
CsaV3_5G029280 Cucumis sativus L. HOM05D005841 ORTHO05D007132 7.8e-131 471.1 398 61.8
Ah.07g203740 Amaranthus hybridus HOM05D005841 ORTHO05D007132 1.7e-130 469.9 351 67.8
Thhalv10010421m.g Eutrema salsugineum HOM05D005841 ORTHO05D007132 1.7e-130 469.9 398 61.8
Solyc10g080520.3 Solanum lycopersicum HOM05D005841 ORTHO05D007132 1.7e-130 469.9 378 65.9
BcaB01g00199 Brassica carinata HOM05D005841 ORTHO05D007132 3.9e-130 468.8 380 64.7
C08p29570 Brassica napus HOM05D005841 ORTHO05D007132 1.1e-129 467.2 402 61.2
Sp5g08040 Schrenkiella parvula HOM05D005841 ORTHO05D007132 2.5e-129 466.1 411 59.4
BolC8t50563H Brassica oleracea HOM05D005841 ORTHO05D007132 5.6e-129 464.9 403 61.3
Sed0002293 Sechium edule HOM05D005841 ORTHO05D007132 7.3e-129 464.5 381 63.5
A09p47340 Brassica napus HOM05D005841 ORTHO05D007132 9.5e-129 464.2 401 61.1
AUR62041651 Chenopodium quinoa HOM05D005841 ORTHO05D007132 9.5e-129 464.2 342 66.7
MBI19_g24060_MAGBIO Magnolia biondii HOM05D005841 ORTHO05D007132 1.2e-128 463.8 410 60.7
BcaB02g07739 Brassica carinata HOM05D005841 ORTHO05D007132 2.1e-128 463.0 329 68.7
AT3G54360 Arabidopsis thaliana HOM05D005841 ORTHO05D007132 3.6e-128 462.2 394 61.7
AL5G35420 Arabidopsis lyrata HOM05D005841 ORTHO05D007132 4.7e-128 461.8 406 60.1
Sed0011967 Sechium edule HOM05D005841 ORTHO05D007132 6.2e-128 461.5 411 59.4
Carub.0005s2096 Capsella rubella HOM05D005841 ORTHO05D007132 1.4e-127 460.3 409 59.2
BraA09t40195Z Brassica rapa HOM05D005841 ORTHO05D007132 2.3e-127 459.5 403 60.8
arahy.Tifrunner.gnm1.ann1.87YK44 Arachis hypogaea HOM05D005841 ORTHO05D007132 4.0e-127 458.8 374 63.9
CARHR164270 Cardamine hirsuta HOM05D005841 ORTHO05D007132 4.0e-127 458.8 398 59.8
Aqoxy3G04362 Aquilegia oxysepala HOM05D005841 ORTHO05D007132 2.6e-126 456.1 356 65.2
A07p22080 Brassica napus HOM05D005841 ORTHO05D007132 6.4e-125 451.4 397 60.2
BraA07t29891Z Brassica rapa HOM05D005841 ORTHO05D007132 6.4e-125 451.4 397 60.2
Psat5g225080 Pisum sativum HOM05D005841 ORTHO05D007132 2.4e-124 449.5 310 72.6
AUR62035532 Chenopodium quinoa HOM05D005841 ORTHO05D007132 1.2e-123 447.2 342 64.6
MD07G1085200 Malus domestica HOM05D005841 ORTHO05D007132 1.6e-123 446.8 366 63.7
SGA_v2.0_scaffold69G23059 Striga asiatica HOM05D005841 ORTHO05D007132 3.5e-123 445.7 354 63.6
Prupe.2G051700 Prunus persica HOM05D005841 ORTHO05D007132 3.0e-122 442.6 367 64.0
Migut.J01841 Erythranthe guttata HOM05D005841 ORTHO05D007132 5.1e-122 441.8 357 63.6
CDE02G3427 Ceratophyllum demersum HOM05D005841 ORTHO05D007132 1.5e-121 440.3 358 61.5
RcHm_v2.0_Chr1g0330051 Rosa chinensis HOM05D005841 ORTHO05D007132 8.1e-120 434.5 361 63.2
SEGI_15550 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 1.2e-118 430.6 366 59.8
Zm00001eb126920 Zea mays HOM05D005841 ORTHO05D007132 1.5e-118 430.3 337 65.0
FvH4_7g04620 Fragaria vesca HOM05D005841 ORTHO05D007132 2.6e-118 429.5 357 64.1
Os01g0104100 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 4.9e-117 425.2 363 60.6
Nn2g15922 Nelumbo nucifera HOM05D005841 ORTHO05D007132 1.1e-116 424.1 354 62.4
ClCG11G012870 Citrullus lanatus HOM05D005841 ORTHO05D007132 1.2e-115 420.6 397 57.2
FAN06G4202 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.3e-112 410.6 342 63.7
FAN03G2595 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.6e-112 410.2 342 63.7
FAN06G1077 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.6e-112 410.2 342 63.7
FAN10G3225 Fragaria x ananassa HOM05D005841 ORTHO05D007132 2.8e-112 409.5 342 63.7
BcaC08g44679 Brassica carinata HOM05D005841 ORTHO05D007132 4.8e-112 408.7 366 59.3
FAN01G0675 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.8e-111 406.8 342 63.5
C06p22120 Brassica napus HOM05D005841 ORTHO05D007132 4.3e-105 385.6 296 65.9
BolC6t37399H Brassica oleracea HOM05D005841 ORTHO05D007132 4.3e-105 385.6 296 65.9
CSS0023245 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 3.1e-103 379.4 213 86.9
Os02g0795300 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 1.4e-100 370.5 366 54.9
Pp3c4_17260 Physcomitrium patens HOM05D005841 ORTHO05D007132 3.2e-100 369.4 316 58.2
Mapoly0042s0033 Marchantia polymorpha HOM05D005841 ORTHO05D007132 3.9e-98 362.5 360 54.2
Gorai.011G224300 Gossypium raimondii HOM05D005841 ORTHO05D007132 1.4e-92 344.0 270 64.4
AagrBONN_evm.TU.Sc2ySwM_344.2135 Anthoceros agrestis HOM05D005841 ORTHO05D007132 3.5e-91 339.3 376 48.9
SMO194G0025 Selaginella moellendorffii HOM05D005841 ORTHO05D007132 5.3e-87 325.5 316 52.8
Ah.15g098060 Amaranthus hybridus HOM05D005841 ORTHO05D007132 3.7e-80 302.8 234 64.1
AUR62039567 Chenopodium quinoa HOM05D005841 ORTHO05D007132 6.3e-80 302.0 365 48.8
AUR62041645 Chenopodium quinoa HOM05D005841 ORTHO05D007132 3.6e-75 286.2 217 65.4
ATR0068G039 Amborella trichopoda HOM05D005841 ORTHO05D007132 5.7e-73 278.9 216 63.9
CBR_g19049 Chara braunii HOM05D005841 ORTHO05D007132 5.2e-58 229.2 390 37.9
HPP92_001714 Vanilla planifolia HOM05D005841 ORTHO05D007132 5.2e-58 229.2 255 51.4
Hma1.2p1_3953F.1_g338070 Hydrangea macrophylla HOM05D005841 ORTHO05D007132 7.0e-55 218.8 149 73.8
Cpa.g.sc33.143 Carica papaya HOM05D005841 ORTHO05D007132 3.5e-54 216.5 156 70.5
Gohir.D10G200101 Gossypium hirsutum HOM05D005841 ORTHO05D007132 5.9e-54 215.7 150 70.0
FAN03G2434 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.3e-45 188.0 128 71.9
TAR629G2175 Trochodendron aralioides HOM05D005841 ORTHO05D007132 2.1e-43 180.6 124 73.4
SEGI_12352 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 6.8e-42 175.6 133 64.7
Gohir.D10G200050 Gossypium hirsutum HOM05D005841 ORTHO05D007132 3.5e-38 163.3 115 69.6
Hma1.2p1_3953F.1_g338060 Hydrangea macrophylla HOM05D005841 ORTHO05D007132 5.7e-33 146.0 79 87.3
SEGI_26376 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 1.1e-20 105.1 147 44.2
Lsat_1_v5_gn_1_17940 Lactuca sativa HOM05D005841 ORTHO05D007132 1.8e-18 97.8 73 64.4
ATR0068G030 Amborella trichopoda HOM05D005841 ORTHO05D007132 1.3e-13 81.6 67 61.2
Cre03.g172600 Chlamydomonas reinhardtii HOM05D005841 ORTHO05D007132 1.5e-12 78.2 424 21.9
Psat0s5799g0040 Pisum sativum HOM05D005841 ORTHO05D007132 2.5e-12 77.4 72 55.6
TPR.G5122 Trifolium pratense HOM05D003377 ORTHO05D004080 5.8e-09 66.2 76 53.9
Psat7g004640 Pisum sativum HOM05D000860 ORTHO05D005731 2.9e-08 63.9 52 61.5
FAN06G2188 Fragaria x ananassa HOM05D005841 ORTHO05D007132 7.8e-06 55.8 36 75.0


User provided reference genes

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