Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07852 Vaccinium macrocarpon HOM05D001974 ORTHO05D001995 2.3e-75 285.4 136 100.0
vmacro07850 Vaccinium macrocarpon HOM05D001974 ORTHO05D001995 2.0e-47 192.6 127 75.6
Manes.08G075000 Manihot esculenta HOM05D001974 ORTHO05D001995 9.6e-42 173.7 127 67.7
Manes.08G075525 Manihot esculenta HOM05D001974 ORTHO05D001995 2.1e-41 172.6 127 66.9
Manes.08G075185 Manihot esculenta HOM05D001974 ORTHO05D001995 6.2e-41 171.0 127 66.1
Manes.08G074900 Manihot esculenta HOM05D001974 ORTHO05D001995 3.1e-40 168.7 113 70.8
Hma1.2p1_0057F.1_g031980 Hydrangea macrophylla HOM05D001974 ORTHO05D001995 2.6e-39 165.6 127 64.6
vmacro07880 Vaccinium macrocarpon HOM05D001974 ORTHO05D001995 3.4e-39 165.2 113 71.7
Manes.08G074000 Manihot esculenta HOM05D001974 ORTHO05D001995 7.6e-39 164.1 127 63.8
Zm00001eb418440 Zea mays HOM05D001974 ORTHO05D001995 1.3e-38 163.3 128 64.1
CSS0016587 Camellia sinensis var. sinensis HOM05D001974 ORTHO05D001995 4.9e-38 161.4 127 63.0
CSS0049093 Camellia sinensis var. sinensis HOM05D001974 ORTHO05D001995 6.4e-38 161.0 127 60.6
CSS0034126 Camellia sinensis var. sinensis HOM05D001974 ORTHO05D001995 2.4e-37 159.1 127 60.6
CANSAT78G0362 Cannabis sativa HOM05D001974 ORTHO05D001995 7.1e-37 157.5 127 60.6
CSS0039191 Camellia sinensis var. sinensis HOM05D001974 ORTHO05D001995 9.3e-37 157.1 127 59.8
Hma1.2p1_1168F.1_g263050 Hydrangea macrophylla HOM05D001974 ORTHO05D001995 1.2e-36 156.8 114 67.5
Manes.09G060824 Manihot esculenta HOM05D001974 ORTHO05D001995 1.3e-35 153.3 125 59.2
Manes.18G086650 Manihot esculenta HOM05D001974 ORTHO05D001995 1.3e-35 153.3 128 60.2
vmacro07881 Vaccinium macrocarpon HOM05D001974 ORTHO05D001995 5.1e-35 151.4 134 59.0
DCAR_003580 Daucus carota HOM05D001974 ORTHO05D001995 2.1e-33 146.0 111 63.1
Os03g0314500 Oryza sativa ssp. japonica HOM05D001974 ORTHO05D001995 5.3e-32 141.4 128 56.2
DCAR_029339 Daucus carota HOM05D001974 ORTHO05D001995 6.5e-30 134.4 111 58.6
Hund23182 Selenicereus undatus HOM05D001974 ORTHO05D001995 1.1e-29 133.7 108 63.9
DCAR_003576 Daucus carota HOM05D001974 ORTHO05D001995 4.2e-29 131.7 111 57.7
Os03g0403400 Oryza sativa ssp. japonica HOM05D001974 ORTHO05D001995 1.2e-28 130.2 131 52.7
Hma1.2p1_0081F.1_g042280 Hydrangea macrophylla HOM05D001974 ORTHO05D001995 3.5e-28 128.6 136 54.4
DCAR_003584 Daucus carota HOM05D001974 ORTHO05D001995 3.9e-27 125.2 111 55.0
DCAR_012095 Daucus carota HOM05D001974 ORTHO05D001995 7.4e-26 120.9 133 51.1
PSO729G0178 Papaver somniferum HOM05D001974 ORTHO05D001995 1.6e-25 119.8 130 52.3
EL10Ac4g07652 Beta vulgaris HOM05D001974 ORTHO05D001995 2.2e-25 119.4 126 49.2
PSO170G4541 Papaver somniferum HOM05D001974 ORTHO05D001995 2.8e-25 119.0 124 54.0
CANSAT21G0707 Cannabis sativa HOM05D001974 ORTHO05D001995 6.3e-25 117.9 131 43.5
CANSAT21G2329 Cannabis sativa HOM05D001974 ORTHO05D001995 6.3e-25 117.9 131 43.5
CANSAT78G2247 Cannabis sativa HOM05D001974 ORTHO05D001995 8.2e-25 117.5 126 47.6
PSO724G0635 Papaver somniferum HOM05D001974 ORTHO05D001995 8.2e-25 117.5 124 54.0
CANSAT78G0033 Cannabis sativa HOM05D001974 ORTHO05D001995 2.4e-24 115.9 128 48.4
EL10Ac4g07653 Beta vulgaris HOM05D001974 ORTHO05D001995 3.1e-24 115.5 126 46.0
CANSAT21G0298 Cannabis sativa HOM05D001974 ORTHO05D001995 5.3e-24 114.8 131 42.7
CSS0030240 Camellia sinensis var. sinensis HOM05D001974 ORTHO05D001995 6.9e-24 114.4 115 53.9
Ah.04g165730 Amaranthus hybridus HOM05D001974 ORTHO05D001995 1.5e-23 113.2 94 55.3
CANSAT78G0831 Cannabis sativa HOM05D001974 ORTHO05D001995 1.5e-23 113.2 128 48.4
PSO173G0011 Papaver somniferum HOM05D001974 ORTHO05D001995 2.6e-23 112.5 118 50.0
Ah.04g166300 Amaranthus hybridus HOM05D001974 ORTHO05D001995 4.5e-23 111.7 114 51.8
PSO724G0495 Papaver somniferum HOM05D001974 ORTHO05D001995 7.6e-23 110.9 118 50.0
CANSAT78G0278 Cannabis sativa HOM05D001974 ORTHO05D001995 2.9e-22 109.0 128 44.5
Os12g0431300 Oryza sativa ssp. japonica HOM05D001974 ORTHO05D001995 5.0e-22 108.2 118 49.2
EL10Ac4g07670 Beta vulgaris HOM05D001974 ORTHO05D001995 1.1e-21 107.1 118 52.5
PSO063G5215 Papaver somniferum HOM05D001974 ORTHO05D001995 4.2e-21 105.1 111 50.5
PSO729G0134 Papaver somniferum HOM05D001974 ORTHO05D001995 5.5e-21 104.8 119 48.7
PSO724G0295 Papaver somniferum HOM05D001974 ORTHO05D001995 1.2e-20 103.6 122 47.5
AUR62025904 Chenopodium quinoa HOM05D001974 ORTHO05D001995 1.5e-18 96.7 121 47.9
CSS0038578 Camellia sinensis var. sinensis HOM05D001974 ORTHO05D001995 1.3e-17 93.6 79 60.8
PSO724G0601 Papaver somniferum HOM05D001974 ORTHO05D001995 1.5e-15 86.7 72 56.9
PSO724G0619 Papaver somniferum HOM05D001974 ORTHO05D001995 1.0e-14 84.0 99 48.5
PSO724G0464 Papaver somniferum HOM05D001974 ORTHO05D001995 1.7e-09 66.6 82 45.1
Cc10_g12500 Coffea canephora HOM05D001974 ORTHO05D001995 4.1e-08 62.0 121 35.5
Cc10_g12490 Coffea canephora HOM05D001974 ORTHO05D001995 2.0e-07 59.7 121 34.7
EL10Ac4g07665 Beta vulgaris HOM05D001974 ORTHO05D001995 3.4e-07 58.9 44 54.5
EL10Ac4g07664 Beta vulgaris HOM05D001974 ORTHO05D001995 5.9e-07 58.2 36 69.4
SEGI_06668 Sequoiadendron giganteum HOM05D001974 ORTHO05D001995 1.0e-06 57.4 123 32.5
AUR62020334 Chenopodium quinoa HOM05D001974 ORTHO05D001995 1.7e-06 56.6 40 67.5
QL09p033082 Quercus lobata HOM05D001974 ORTHO05D001995 6.5e-06 54.7 117 31.6


User provided reference genes

Program Settings