Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07836 Vaccinium macrocarpon HOM05D000610 ORTHO05D004774 5.9e-132 474.2 234 100.0
Actinidia39216 Actinidia chinensis HOM05D000610 ORTHO05D004774 1.1e-64 250.8 180 73.9
vmacro07837 Vaccinium macrocarpon HOM05D000610 ORTHO05D004774 1.1e-64 250.8 219 64.8
vmacro01304 Vaccinium macrocarpon HOM05D000610 ORTHO05D004774 1.4e-64 250.4 208 65.9
Rhsim03G0027100 Rhododendron simsii HOM05D000610 ORTHO05D004774 5.3e-64 248.4 180 73.9
CSS0003889 Camellia sinensis var. sinensis HOM05D000610 ORTHO05D004774 1.7e-62 243.4 180 70.6
CSS0013319 Camellia sinensis var. sinensis HOM05D000610 ORTHO05D004774 1.7e-62 243.4 180 70.6
Thecc.05G148900 Theobroma cacao HOM05D000610 ORTHO05D004774 3.5e-60 235.7 180 67.2
Hma1.2p1_1280F.1_g272560 Hydrangea macrophylla HOM05D000610 ORTHO05D004774 5.1e-59 231.9 180 67.8
Atru.chr1.1123 Acer truncatum HOM05D000610 ORTHO05D004774 8.7e-59 231.1 180 67.2
Duzib093G2237 Durio zibethinus HOM05D000610 ORTHO05D004774 1.1e-58 230.7 179 65.4
Gohir.A01G131111 Gossypium hirsutum HOM05D000610 ORTHO05D004774 1.9e-58 229.9 180 65.0
Gohir.D01G120000 Gossypium hirsutum HOM05D000610 ORTHO05D004774 4.3e-58 228.8 180 65.0
Atru.chr1.1122 Acer truncatum HOM05D000610 ORTHO05D004774 7.4e-58 228.0 180 66.7
Potri.006G049300 Populus trichocarpa HOM05D000610 ORTHO05D004774 9.6e-58 227.6 180 65.6
PSO384G3904 Papaver somniferum HOM05D000610 ORTHO05D004774 4.8e-57 225.3 176 64.8
Duzib128G1628 Durio zibethinus HOM05D000610 ORTHO05D004774 1.1e-56 224.2 183 64.5
COL.COLO4_08236 Corchorus olitorius HOM05D000610 ORTHO05D004774 1.4e-56 223.8 180 62.8
Manes.09G020400 Manihot esculenta HOM05D000610 ORTHO05D004774 1.4e-56 223.8 178 63.5
GSVIVG01033258001 Vitis vinifera HOM05D000610 ORTHO05D004774 2.4e-56 223.0 180 68.3
Gorai.002G146400 Gossypium raimondii HOM05D000610 ORTHO05D004774 4.1e-56 222.2 185 63.8
Oeu023112.1 Olea europaea HOM05D000610 ORTHO05D004774 6.9e-56 221.5 178 62.9
TWI74G1635 Tripterygium wilfordii HOM05D000610 ORTHO05D004774 2.6e-55 219.5 188 59.6
MBI19_g35693_MAGBIO Magnolia biondii HOM05D000610 ORTHO05D004774 3.4e-55 219.2 178 65.2
PGR004G2234 Punica granatum HOM05D000610 ORTHO05D004774 3.4e-55 219.2 178 61.8
Nn7g36312 Nelumbo nucifera HOM05D000610 ORTHO05D004774 4.5e-55 218.8 178 63.5
Cfa016807 Carpinus fangiana HOM05D000610 ORTHO05D004774 7.6e-55 218.0 178 64.6
Haze_19838 Corylus avellana HOM05D000610 ORTHO05D004774 7.6e-55 218.0 178 64.6
TWI53G1231 Tripterygium wilfordii HOM05D000610 ORTHO05D004774 7.6e-55 218.0 188 60.1
Ciclev10004128m.g Citrus clementina HOM05D000610 ORTHO05D004774 1.7e-54 216.9 180 61.1
CiPaw.09G038900 Carya illinoinensis HOM05D000610 ORTHO05D004774 5.0e-54 215.3 180 63.9
Cc06_g17650 Coffea canephora HOM05D000610 ORTHO05D004774 8.5e-54 214.5 179 62.6
CANSAT80G2124 Cannabis sativa HOM05D000610 ORTHO05D004774 3.2e-53 212.6 178 61.2
arahy.Tifrunner.gnm1.ann1.50CUSQ Arachis hypogaea HOM05D000610 ORTHO05D004774 9.3e-53 211.1 180 60.6
FvH4_6g24100 Fragaria vesca HOM05D000610 ORTHO05D004774 2.1e-52 209.9 180 62.2
Prupe.7G058100 Prunus persica HOM05D000610 ORTHO05D004774 2.1e-52 209.9 180 61.1
Aqoxy1G00231 Aquilegia oxysepala HOM05D000610 ORTHO05D004774 3.6e-52 209.1 180 62.8
RcHm_v2.0_Chr3g0482761 Rosa chinensis HOM05D000610 ORTHO05D004774 4.6e-52 208.8 180 61.7
Lalb_Chr25g0287161 Lupinus albus HOM05D000610 ORTHO05D004774 7.9e-52 208.0 180 60.6
SalBow6G0358 Salvia bowleyana HOM05D000610 ORTHO05D004774 1.3e-51 207.2 178 61.2
SalBow6G6580 Salvia bowleyana HOM05D000610 ORTHO05D004774 1.3e-51 207.2 178 61.2
CAN.G676.30 Capsicum annuum HOM05D000610 ORTHO05D004774 1.8e-51 206.8 180 56.7
Nitab4.5_0000586g0130 Nicotiana tabacum HOM05D000610 ORTHO05D004774 1.8e-51 206.8 180 57.2
MSTRG.6422 Avicennia marina HOM05D000610 ORTHO05D004774 2.3e-51 206.5 178 61.2
Glyma.03G136000 Glycine max HOM05D000610 ORTHO05D004774 2.3e-51 206.5 180 59.4
MD12G1079400 Malus domestica HOM05D000610 ORTHO05D004774 2.3e-51 206.5 180 60.6
Phvul.001G131150 Phaseolus vulgaris HOM05D000610 ORTHO05D004774 2.3e-51 206.5 183 59.0
HanXRQChr10g0300621 Helianthus annuus HOM05D000610 ORTHO05D004774 5.1e-51 205.3 178 60.7
FAN09G1277 Fragaria x ananassa HOM05D000610 ORTHO05D004774 8.7e-51 204.5 184 60.3
Sed0024936 Sechium edule HOM05D000610 ORTHO05D004774 8.7e-51 204.5 179 58.1
AUR62026051 Chenopodium quinoa HOM05D000610 ORTHO05D004774 1.1e-50 204.1 180 57.8
FAN14G3175 Fragaria x ananassa HOM05D000610 ORTHO05D004774 1.1e-50 204.1 184 60.9
Peaxi162Scf00130g00325 Petunia axillaris HOM05D000610 ORTHO05D004774 1.1e-50 204.1 180 56.1
ClCG04G003390 Citrullus lanatus HOM05D000610 ORTHO05D004774 1.9e-50 203.4 179 59.2
Solyc04g015970.3 Solanum lycopersicum HOM05D000610 ORTHO05D004774 2.5e-50 203.0 180 56.7
Sopen04g007980 Solanum pennellii HOM05D000610 ORTHO05D004774 2.5e-50 203.0 180 56.7
Cpa.g.sc224.8 Carica papaya HOM05D000610 ORTHO05D004774 3.3e-50 202.6 180 60.6
Ca_08444_v3 Cicer arietinum L. HOM05D000610 ORTHO05D004774 4.3e-50 202.2 178 60.1
Lsat_1_v5_gn_9_30620 Lactuca sativa HOM05D000610 ORTHO05D004774 7.4e-50 201.4 175 60.0
MELO3C023103.2 Cucumis melo HOM05D000610 ORTHO05D004774 9.7e-50 201.1 181 58.6
ECA247G3032 Erigeron canadensis HOM05D000610 ORTHO05D004774 9.7e-50 201.1 176 60.2
DCAR_020495 Daucus carota HOM05D000610 ORTHO05D004774 1.6e-49 200.3 179 55.9
Migut.J01749 Erythranthe guttata HOM05D000610 ORTHO05D004774 1.6e-49 200.3 180 58.3
CsaV3_4G011860 Cucumis sativus L. HOM05D000610 ORTHO05D004774 2.2e-49 199.9 192 55.7
FAN02G4008 Fragaria x ananassa HOM05D000610 ORTHO05D004774 2.2e-49 199.9 184 59.8
AUR62024461 Chenopodium quinoa HOM05D000610 ORTHO05D004774 3.7e-49 199.1 180 57.2
TPR.G3701 Trifolium pratense HOM05D000610 ORTHO05D004774 1.8e-48 196.8 180 58.3
Eucgr.A02339 Eucalyptus grandis HOM05D000610 ORTHO05D004774 4.1e-48 195.7 180 58.3
Ah.04g151590 Amaranthus hybridus HOM05D000610 ORTHO05D004774 5.3e-48 195.3 179 58.1
Lj1g0005409 Lotus japonicus HOM05D000610 ORTHO05D004774 5.3e-48 195.3 180 60.0
EL10Ac3g07101 Beta vulgaris HOM05D000610 ORTHO05D004774 6.9e-48 194.9 180 57.2
CARHR136790 Cardamine hirsuta HOM05D000610 ORTHO05D004774 1.2e-47 194.1 181 59.7
Medtr7g091380 Medicago truncatula HOM05D000610 ORTHO05D004774 1.5e-47 193.7 180 57.8
AT2G41700 Arabidopsis thaliana HOM05D000610 ORTHO05D004774 7.7e-47 191.4 181 59.1
Psat3g072960 Pisum sativum HOM05D000610 ORTHO05D004774 1.0e-46 191.0 180 57.2
THA.LOC104824436 Tarenaya hassleriana HOM05D000610 ORTHO05D004774 1.3e-46 190.7 180 56.7
SGA_v2.0_scaffold69G23121 Striga asiatica HOM05D000610 ORTHO05D004774 2.9e-46 189.5 205 49.3
ATR0188G019 Amborella trichopoda HOM05D000610 ORTHO05D004774 3.8e-46 189.1 178 56.7
AL4G40000 Arabidopsis lyrata HOM05D000610 ORTHO05D004774 3.8e-46 189.1 181 58.0
A03p23380 Brassica napus HOM05D000610 ORTHO05D004774 1.1e-45 187.6 181 56.9
BraA03t11555Z Brassica rapa HOM05D000610 ORTHO05D004774 1.1e-45 187.6 181 56.9
Carub.0004s2397 Capsella rubella HOM05D000610 ORTHO05D004774 1.4e-45 187.2 181 57.5
Sp4g23940 Schrenkiella parvula HOM05D000610 ORTHO05D004774 1.9e-45 186.8 181 58.6
Thhalv10016127m.g Eutrema salsugineum HOM05D000610 ORTHO05D004774 2.5e-45 186.4 181 57.5
C03p27900 Brassica napus HOM05D000610 ORTHO05D004774 9.4e-45 184.5 181 55.8
BolC3t15161H Brassica oleracea HOM05D000610 ORTHO05D004774 9.4e-45 184.5 181 55.8
Aa31LG1G23710 Aethionema arabicum HOM05D000610 ORTHO05D004774 1.0e-43 181.0 181 55.8
CDE05G0129 Ceratophyllum demersum HOM05D000610 ORTHO05D004774 8.8e-43 177.9 182 52.2
HPP92_019411 Vanilla planifolia HOM05D000610 ORTHO05D004774 3.3e-42 176.0 174 53.4
HPP92_019408 Vanilla planifolia HOM05D000610 ORTHO05D004774 3.7e-41 172.6 174 52.9
Dinv18665 Davidia involucrata HOM05D000610 ORTHO05D004774 7.2e-37 158.3 134 63.4
BcaC01g05322 Brassica carinata HOM05D000610 ORTHO05D004774 2.3e-35 153.3 93 78.5
TAR633G1531 Trochodendron aralioides HOM05D000610 ORTHO05D004774 1.1e-34 151.0 140 57.9
TAR636G1590 Trochodendron aralioides HOM05D000610 ORTHO05D004774 1.7e-33 147.1 133 58.6
unitig_8.g3504 Utricularia gibba HOM05D000610 ORTHO05D004774 7.0e-32 141.7 164 47.0
VMungo1383G2829 Vigna mungo HOM05D000610 ORTHO05D004774 2.1e-28 130.2 133 51.1
Dinv39616 Davidia involucrata HOM05D000610 ORTHO05D004774 6.1e-28 128.6 69 85.5
Sc13g0001650 Simmondsia chinensis HOM05D000610 ORTHO05D004774 4.8e-25 119.0 134 47.0
MD14G1075700 Malus domestica HOM05D000610 ORTHO05D004774 8.8e-19 98.2 63 68.3
MBI19_g41433_MAGBIO Magnolia biondii HOM05D000610 ORTHO05D004774 5.7e-18 95.5 102 55.9
SMO266G0031 Selaginella moellendorffii HOM05D000610 ORTHO05D004774 1.7e-17 94.0 100 49.0
CSS0035999 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 2.9e-14 83.2 44 84.1
CSS0025466 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 1.9e-13 80.5 43 83.7
RcHm_v2.0_Chr4g0407181 Rosa chinensis HOM05D000644 ORTHO05D000504 4.2e-13 79.3 49 71.4
Hma1.2p1_0871F.1_g231100 Hydrangea macrophylla HOM05D000610 ORTHO05D004774 7.2e-13 78.6 60 65.0
Hma1.2p1_1280F.1_g272565 Hydrangea macrophylla HOM05D000610 ORTHO05D004774 7.2e-13 78.6 60 65.0
RcHm_v2.0_Chr5g0063671 Rosa chinensis HOM05D000644 ORTHO05D000504 6.1e-12 75.5 49 69.4
Nitab4.5_0002328g0010 Nicotiana tabacum HOM05D000610 ORTHO05D004774 1.2e-10 71.2 61 49.2
CBR_g38217 Chara braunii HOM05D000610 ORTHO05D004774 2.2e-09 67.0 74 45.9
Hund24698 Selenicereus undatus HOM05D000610 ORTHO05D004774 8.3e-09 65.1 61 54.1
Mapoly0049s0026 Marchantia polymorpha HOM05D000610 ORTHO05D004774 9.2e-08 61.6 73 42.5
CSS0009051 Camellia sinensis var. sinensis HOM05D000610 ORTHO05D004774 2.0e-07 60.5 31 83.9


User provided reference genes

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