Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07790 Vaccinium macrocarpon HOM05D007733 ORTHO05D009786 8.1e-38 159.8 77 100.0
Manes.01G136000 Manihot esculenta HOM05D007733 ORTHO05D009786 1.2e-17 92.8 49 87.8
FAN01G2779 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.8e-16 89.0 59 71.2
MD00G1018100 Malus domestica HOM05D007733 ORTHO05D009786 3.0e-16 88.2 49 77.6
Oeu063785.1 Olea europaea HOM05D007733 ORTHO05D009786 3.0e-16 88.2 49 79.6
CiPaw.09G048000 Carya illinoinensis HOM05D007733 ORTHO05D009786 6.7e-16 87.0 49 79.6
Hma1.2p1_0757F.1_g213300 Hydrangea macrophylla HOM05D007733 ORTHO05D009786 6.7e-16 87.0 64 67.2
Migut.J01653 Erythranthe guttata HOM05D007733 ORTHO05D009786 8.7e-16 86.7 49 77.6
Oeu022972.2 Olea europaea HOM05D007733 ORTHO05D009786 8.7e-16 86.7 41 95.1
Potri.016G036400 Populus trichocarpa HOM05D007733 ORTHO05D009786 1.1e-15 86.3 49 75.5
Thecc.01G129600 Theobroma cacao HOM05D007733 ORTHO05D009786 1.1e-15 86.3 46 84.8
MELO3C019082.2 Cucumis melo HOM05D007733 ORTHO05D009786 1.5e-15 85.9 49 77.6
CsaV3_4G029620 Cucumis sativus L. HOM05D007733 ORTHO05D009786 1.5e-15 85.9 49 77.6
HanXRQChr01g0008231 Helianthus annuus HOM05D007733 ORTHO05D009786 1.5e-15 85.9 43 88.4
Potri.006G039100 Populus trichocarpa HOM05D007733 ORTHO05D009786 1.5e-15 85.9 47 83.0
PGR031G3673 Punica granatum HOM05D007733 ORTHO05D009786 1.5e-15 85.9 48 79.2
RcHm_v2.0_Chr1g0328411 Rosa chinensis HOM05D007733 ORTHO05D009786 1.5e-15 85.9 52 75.0
FAN03G1257 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.9e-15 85.5 49 77.6
FAN06G4775 Fragaria x ananassa HOM05D007733 ORTHO05D009786 1.9e-15 85.5 49 77.6
FAN10G3322 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.9e-15 85.5 49 77.6
Nitab4.5_0000812g0080 Nicotiana tabacum HOM05D007733 ORTHO05D009786 1.9e-15 85.5 41 95.1
Peaxi162Scf00696g00026 Petunia axillaris HOM05D007733 ORTHO05D009786 1.9e-15 85.5 49 79.6
Prupe.7G032300 Prunus persica HOM05D007733 ORTHO05D009786 1.9e-15 85.5 49 75.5
Sc19g0008160 Simmondsia chinensis HOM05D007733 ORTHO05D009786 1.9e-15 85.5 41 95.1
CSS0035024 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 2.5e-15 85.1 46 87.0
PGSC0003DMG401008361 Solanum tuberosum HOM05D007733 ORTHO05D009786 2.5e-15 85.1 49 77.6
MD12G1095600 Malus domestica HOM05D007733 ORTHO05D009786 3.3e-15 84.7 41 87.8
Sed0021033 Sechium edule HOM05D007733 ORTHO05D009786 3.3e-15 84.7 49 75.5
Solyc10g078420.2 Solanum lycopersicum HOM05D007733 ORTHO05D009786 3.3e-15 84.7 49 77.6
THA.LOC104819346 Tarenaya hassleriana HOM05D007733 ORTHO05D009786 3.3e-15 84.7 49 71.4
CSS0016184 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 4.3e-15 84.3 41 92.7
CSS0036430 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 4.3e-15 84.3 41 92.7
Nitab4.5_0004588g0050 Nicotiana tabacum HOM05D007733 ORTHO05D009786 4.3e-15 84.3 41 92.7
COL.COLO4_35702 Corchorus olitorius HOM05D007733 ORTHO05D009786 5.7e-15 84.0 41 90.2
Gohir.A11G247101 Gossypium hirsutum HOM05D007733 ORTHO05D009786 9.7e-15 83.2 46 80.4
RcHm_v2.0_Chr1g0328511 Rosa chinensis HOM05D007733 ORTHO05D009786 9.7e-15 83.2 48 77.1
Phvul.005G122800 Phaseolus vulgaris HOM05D007733 ORTHO05D009786 1.3e-14 82.8 49 73.5
BcaB05g21564 Brassica carinata HOM05D007733 ORTHO05D009786 1.6e-14 82.4 49 71.4
BcaC03g13244 Brassica carinata HOM05D007733 ORTHO05D009786 1.6e-14 82.4 49 71.4
C02p03760 Brassica napus HOM05D007733 ORTHO05D009786 1.6e-14 82.4 49 71.4
BolC2t06337H Brassica oleracea HOM05D007733 ORTHO05D009786 1.6e-14 82.4 49 71.4
BraA02t04971Z Brassica rapa HOM05D007733 ORTHO05D009786 1.6e-14 82.4 49 71.4
CAN.G960.60 Capsicum annuum HOM05D007733 ORTHO05D009786 1.6e-14 82.4 49 75.5
Thhalv10015230m.g Eutrema salsugineum HOM05D007733 ORTHO05D009786 1.6e-14 82.4 49 71.4
Gohir.D11G257301 Gossypium hirsutum HOM05D007733 ORTHO05D009786 1.6e-14 82.4 41 87.8
Gorai.007G275700 Gossypium raimondii HOM05D007733 ORTHO05D009786 1.6e-14 82.4 41 87.8
Sp6g34080 Schrenkiella parvula HOM05D007733 ORTHO05D009786 1.6e-14 82.4 49 71.4
SGA_v2.0_scaffold105G30286 Striga asiatica HOM05D007733 ORTHO05D009786 1.6e-14 82.4 46 80.4
SGA_v2.0_scaffold3G01720 Striga asiatica HOM05D007733 ORTHO05D009786 1.6e-14 82.4 46 80.4
Atru.chr1.1436 Acer truncatum HOM05D007733 ORTHO05D009786 2.2e-14 82.0 48 75.0
AL6G19610 Arabidopsis lyrata HOM05D007733 ORTHO05D009786 2.2e-14 82.0 49 71.4
AT5G09225 Arabidopsis thaliana HOM05D007733 ORTHO05D009786 2.2e-14 82.0 49 71.4
CARHR204200 Cardamine hirsuta HOM05D007733 ORTHO05D009786 2.2e-14 82.0 49 71.4
Aqoxy1G00180 Aquilegia oxysepala HOM05D007733 ORTHO05D009786 2.8e-14 81.6 48 75.0
Carub.0006s0778 Capsella rubella HOM05D007733 ORTHO05D009786 2.8e-14 81.6 49 71.4
Duzib264G0681 Durio zibethinus HOM05D007733 ORTHO05D009786 2.8e-14 81.6 46 80.4
RcHm_v2.0_Chr1g0328381 Rosa chinensis HOM05D007733 ORTHO05D009786 2.8e-14 81.6 54 72.2
Aa31LG1G18010 Aethionema arabicum HOM05D007733 ORTHO05D009786 3.7e-14 81.3 49 69.4
arahy.Tifrunner.gnm1.ann1.2TE5XM Arachis hypogaea HOM05D007733 ORTHO05D009786 3.7e-14 81.3 56 66.1
Peaxi162Scf00848g00014 Petunia axillaris HOM05D007733 ORTHO05D009786 3.7e-14 81.3 41 87.8
Thhalv10005241m.g Eutrema salsugineum HOM05D007733 ORTHO05D009786 4.8e-14 80.9 49 71.4
Lalb_Chr06g0173691 Lupinus albus HOM05D007733 ORTHO05D009786 4.8e-14 80.9 49 73.5
arahy.Tifrunner.gnm1.ann1.05QC9F Arachis hypogaea HOM05D007733 ORTHO05D009786 6.3e-14 80.5 46 76.1
CDE04G2892 Ceratophyllum demersum HOM05D007733 ORTHO05D009786 6.3e-14 80.5 49 73.5
Cc06_g19360 Coffea canephora HOM05D007733 ORTHO05D009786 6.3e-14 80.5 49 75.5
Manes.02G094502 Manihot esculenta HOM05D007733 ORTHO05D009786 6.3e-14 80.5 45 82.2
Psat4g102040 Pisum sativum HOM05D007733 ORTHO05D009786 6.3e-14 80.5 46 78.3
Hund24585 Selenicereus undatus HOM05D007733 ORTHO05D009786 6.3e-14 80.5 43 83.7
BraA06t25997Z Brassica rapa HOM05D007733 ORTHO05D009786 8.2e-14 80.1 47 72.3
Glyma.12G186000 Glycine max HOM05D007733 ORTHO05D009786 8.2e-14 80.1 49 71.4
Glyma.13G315500 Glycine max HOM05D007733 ORTHO05D009786 8.2e-14 80.1 49 71.4
Medtr1g069390 Medicago truncatula HOM05D007733 ORTHO05D009786 8.2e-14 80.1 49 69.4
TWI74G1577 Tripterygium wilfordii HOM05D007733 ORTHO05D009786 8.2e-14 80.1 47 76.6
MBI19_g20791_MAGBIO Magnolia biondii HOM05D007733 ORTHO05D009786 1.4e-13 79.3 41 85.4
BcaC01g02637 Brassica carinata HOM05D007733 ORTHO05D009786 3.1e-13 78.2 47 70.2
BcaB02g09770 Brassica carinata HOM05D007733 ORTHO05D009786 5.3e-13 77.4 48 66.7
Peaxi162Scf00696g00024 Petunia axillaris HOM05D007733 ORTHO05D009786 5.3e-13 77.4 40 87.5
A06p30480 Brassica napus HOM05D007733 ORTHO05D009786 9.1e-13 76.6 47 70.2
CANSAT64G1685 Cannabis sativa HOM05D007733 ORTHO05D009786 1.5e-12 75.9 41 80.5
Os11g0136701 Oryza sativa ssp. japonica HOM05D007733 ORTHO05D009786 1.5e-12 75.9 41 78.0
PSO384G4410 Papaver somniferum HOM05D007733 ORTHO05D009786 2.6e-12 75.1 46 67.4
GSVIVG01004069001 Vitis vinifera HOM05D007733 ORTHO05D009786 2.6e-12 75.1 53 62.3
Lsat_1_v5_gn_5_157040 Lactuca sativa HOM05D007733 ORTHO05D009786 3.4e-12 74.7 42 81.0
Os12g0133600 Oryza sativa ssp. japonica HOM05D007733 ORTHO05D009786 5.9e-12 73.9 41 75.6
DCAR_027120 Daucus carota HOM05D000958 ORTHO05D000786 5.0e-11 70.9 38 86.8
HPP92_015863 Vanilla planifolia HOM05D007733 ORTHO05D009786 5.0e-11 70.9 40 77.5
HPP92_015865 Vanilla planifolia HOM05D007733 ORTHO05D009786 5.0e-11 70.9 40 77.5
Zm00001eb093420 Zea mays HOM05D007733 ORTHO05D009786 2.5e-10 68.6 41 70.7
SalBow7G0067 Salvia bowleyana HOM05D007733 ORTHO05D009786 1.8e-08 62.4 42 61.9
RcHm_v2.0_Chr1g0328311 Rosa chinensis HOM05D007733 ORTHO05D009786 3.0e-08 61.6 34 82.4
Gohir.A11G247151 Gossypium hirsutum HOM05D007733 ORTHO05D009786 4.4e-07 57.8 36 80.6


User provided reference genes

Program Settings