Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07741 Vaccinium macrocarpon HOM05D005563 ORTHO05D006667 5.5e-300 1033.5 505 100.0
Rhsim01G0058900 Rhododendron simsii HOM05D005563 ORTHO05D006667 1.8e-210 736.1 437 84.4
Rhsim01G0059200 Rhododendron simsii HOM05D005563 ORTHO05D006667 1.3e-205 719.9 437 82.8
CSS0040007 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 1.2e-177 627.1 427 72.6
CSS0002080 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 1.6e-174 616.7 427 71.4
Actinidia29363 Actinidia chinensis HOM05D005563 ORTHO05D006667 1.3e-168 597.0 410 72.2
Dinv22054 Davidia involucrata HOM05D005563 ORTHO05D006667 8.5e-160 567.8 432 66.2
Cfa007306 Carpinus fangiana HOM05D005563 ORTHO05D006667 1.2e-142 510.8 417 63.1
GSVIVG01037139001 Vitis vinifera HOM05D005563 ORTHO05D006667 1.2e-142 510.8 414 63.0
QL09p001227 Quercus lobata HOM05D005563 ORTHO05D006667 4.0e-141 505.8 412 63.1
CiPaw.04G008700 Carya illinoinensis HOM05D005563 ORTHO05D006667 3.7e-139 499.2 409 63.6
Ciclev10020232m.g Citrus clementina HOM05D005563 ORTHO05D006667 3.1e-138 496.1 427 59.5
Prupe.8G002700 Prunus persica HOM05D005563 ORTHO05D006667 2.0e-137 493.4 407 61.7
RcHm_v2.0_Chr6g0249561 Rosa chinensis HOM05D005563 ORTHO05D006667 3.5e-137 492.7 416 62.3
Duzib177G0343 Durio zibethinus HOM05D005563 ORTHO05D006667 2.2e-136 490.0 411 61.1
Thecc.05G149300 Theobroma cacao HOM05D005563 ORTHO05D006667 9.5e-135 484.6 414 60.6
TAR628G0232 Trochodendron aralioides HOM05D005563 ORTHO05D006667 5.2e-133 478.8 418 59.3
Haze_14007 Corylus avellana HOM05D005563 ORTHO05D006667 1.2e-132 477.6 525 51.2
CANSAT64G1925 Cannabis sativa HOM05D005563 ORTHO05D006667 4.4e-132 475.7 407 60.4
FvH4_2g00270 Fragaria vesca HOM05D005563 ORTHO05D006667 1.8e-130 470.3 427 58.1
Cc02_g22680 Coffea canephora HOM05D005563 ORTHO05D006667 3.1e-130 469.5 423 58.2
Potri.013G094800 Populus trichocarpa HOM05D005563 ORTHO05D006667 4.5e-129 465.7 412 58.7
Nn5g27214 Nelumbo nucifera HOM05D005563 ORTHO05D006667 5.9e-129 465.3 413 58.4
MD10G1001500 Malus domestica HOM05D005563 ORTHO05D006667 3.8e-128 462.6 408 59.6
Lj3g0011209 Lotus japonicus HOM05D005563 ORTHO05D006667 5.0e-128 462.2 418 58.4
Glyma.13G312100 Glycine max HOM05D005563 ORTHO05D006667 6.6e-128 461.8 407 59.7
Aqoxy1G00244 Aquilegia oxysepala HOM05D005563 ORTHO05D006667 7.3e-127 458.4 414 58.0
FAN24G3564 Fragaria x ananassa HOM05D005563 ORTHO05D006667 9.5e-127 458.0 446 55.6
Sabra13G0080900 Salix brachista HOM05D005563 ORTHO05D006667 1.6e-126 457.2 411 57.9
Gorai.009G262600 Gossypium raimondii HOM05D005563 ORTHO05D006667 3.6e-126 456.1 409 56.7
arahy.Tifrunner.gnm1.ann1.QV839S Arachis hypogaea HOM05D005563 ORTHO05D006667 1.8e-125 453.8 415 56.6
ECA232G0495 Erigeron canadensis HOM05D004116 ORTHO05D004734 2.3e-125 453.4 408 60.0
DCAR_010113 Daucus carota HOM05D005563 ORTHO05D006667 5.2e-125 452.2 427 56.4
VMungo1080G1448 Vigna mungo HOM05D005563 ORTHO05D006667 6.8e-125 451.8 404 58.9
Oeu009445.1 Olea europaea HOM05D005563 ORTHO05D006667 1.2e-124 451.1 408 57.6
DCAR_001180 Daucus carota HOM05D005563 ORTHO05D006667 9.8e-124 448.0 428 55.4
Lalb_Chr24g0393341 Lupinus albus HOM05D005563 ORTHO05D006667 9.8e-124 448.0 410 58.0
Phvul.005G118600 Phaseolus vulgaris HOM05D005563 ORTHO05D006667 9.8e-124 448.0 406 58.1
Oeu019017.1 Olea europaea HOM05D005563 ORTHO05D006667 4.9e-123 445.7 411 58.4
Nitab4.5_0006591g0020 Nicotiana tabacum HOM05D005563 ORTHO05D006667 5.4e-122 442.2 418 56.9
Atru.chr13.2584 Acer truncatum HOM05D005563 ORTHO05D006667 7.0e-122 441.8 427 55.0
ClCG11G000440 Citrullus lanatus HOM05D005563 ORTHO05D006667 7.0e-122 441.8 410 58.0
DCAR_027509 Daucus carota HOM05D005563 ORTHO05D006667 1.6e-121 440.7 428 54.7
Medtr8g103020 Medicago truncatula HOM05D005563 ORTHO05D006667 1.6e-121 440.7 419 57.0
TPR.G23443 Trifolium pratense HOM05D005563 ORTHO05D006667 1.5e-119 434.1 426 55.9
Migut.G00338 Erythranthe guttata HOM05D005563 ORTHO05D006667 2.8e-118 429.9 410 55.1
CAN.G587.23 Capsicum annuum HOM05D005563 ORTHO05D006667 3.1e-117 426.4 403 56.3
Psat7g014680 Pisum sativum HOM05D005563 ORTHO05D006667 5.2e-117 425.6 448 52.7
PGR044G0823 Punica granatum HOM05D005563 ORTHO05D006667 1.5e-116 424.1 423 53.9
CsaV3_6G042510 Cucumis sativus L. HOM05D005563 ORTHO05D006667 9.8e-116 421.4 410 56.3
PSO761G0451 Papaver somniferum HOM05D005563 ORTHO05D006667 1.1e-114 417.9 420 54.8
CAN.G769.9 Capsicum annuum HOM05D005563 ORTHO05D006667 5.4e-114 415.6 403 55.8
Solyc03g026100.1 Solanum lycopersicum HOM05D005563 ORTHO05D006667 2.7e-113 413.3 404 55.4
A07p30780 Brassica napus HOM05D005563 ORTHO05D006667 3.5e-113 412.9 417 54.9
PGSC0003DMG400014277 Solanum tuberosum HOM05D005563 ORTHO05D006667 7.8e-113 411.8 403 56.1
CARHR064610 Cardamine hirsuta HOM05D005563 ORTHO05D006667 1.0e-112 411.4 423 53.0
SGA_v2.0_scaffold277G46672 Striga asiatica HOM05D005563 ORTHO05D006667 1.7e-112 410.6 416 52.6
BcaB03g14889 Brassica carinata HOM05D005563 ORTHO05D006667 1.5e-111 407.5 418 54.1
AL2G30920 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 3.3e-111 406.4 421 53.2
Sp5g26490 Schrenkiella parvula HOM05D005563 ORTHO05D006667 3.3e-111 406.4 414 53.6
BcaC08g45784 Brassica carinata HOM05D005563 ORTHO05D006667 5.6e-111 405.6 418 54.3
THA.LOC104825030 Tarenaya hassleriana HOM05D005563 ORTHO05D006667 5.6e-111 405.6 421 52.7
BraA07t30715Z Brassica rapa HOM05D005563 ORTHO05D006667 7.3e-111 405.2 421 54.4
C06p35680 Brassica napus HOM05D005563 ORTHO05D006667 1.2e-110 404.4 418 54.3
Sopen03g004940 Solanum pennellii HOM05D005563 ORTHO05D006667 1.2e-110 404.4 404 55.4
Thhalv10018623m.g Eutrema salsugineum HOM05D005563 ORTHO05D006667 2.1e-110 403.7 416 52.4
BcaB03g15600 Brassica carinata HOM05D005563 ORTHO05D006667 2.8e-110 403.3 417 53.5
AL1G12770 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 1.1e-109 401.4 410 53.9
Aa31LG4G9220 Aethionema arabicum HOM05D005563 ORTHO05D006667 1.8e-109 400.6 420 52.4
BolC6t38691H Brassica oleracea HOM05D005563 ORTHO05D006667 3.1e-109 399.8 422 53.8
AT5G24670 Arabidopsis thaliana HOM05D005563 ORTHO05D006667 6.8e-109 398.7 421 52.0
Eucgr.G00337 Eucalyptus grandis HOM05D005563 ORTHO05D006667 6.8e-109 398.7 411 54.5
TAR633G2728 Trochodendron aralioides HOM05D005563 ORTHO05D006667 2.0e-108 397.1 415 51.3
TWI18G0160 Tripterygium wilfordii HOM05D005563 ORTHO05D006667 5.8e-108 395.6 425 50.6
Lsat_1_v5_gn_4_170241 Lactuca sativa HOM05D005563 ORTHO05D006667 7.5e-108 395.2 430 52.1
Carub.0002s1819 Capsella rubella HOM05D005563 ORTHO05D006667 1.7e-107 394.0 422 51.9
arahy.Tifrunner.gnm1.ann1.NB4SND Arachis hypogaea HOM05D005563 ORTHO05D006667 1.1e-106 391.3 436 50.5
MBI14_g08074_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 1.9e-106 390.6 386 56.5
Hund26934 Selenicereus undatus HOM05D005563 ORTHO05D006667 1.9e-106 390.6 429 50.6
Manes.18G108800 Manihot esculenta HOM05D005563 ORTHO05D006667 3.2e-106 389.8 361 58.7
Carub.0004s0662 Capsella rubella HOM05D005563 ORTHO05D006667 1.2e-102 377.9 408 51.5
PSO170G2533 Papaver somniferum HOM05D005563 ORTHO05D006667 5.2e-101 372.5 431 50.3
Nitab4.5_0001489g0080 Nicotiana tabacum HOM05D005563 ORTHO05D006667 2.6e-100 370.2 364 55.8
PSO407G0243 Papaver somniferum HOM05D005563 ORTHO05D006667 4.9e-99 365.9 431 50.1
PSO017G5640 Papaver somniferum HOM05D005563 ORTHO05D006667 1.4e-98 364.4 419 50.8
Nitab4.5_0000079g0140 Nicotiana tabacum HOM05D005563 ORTHO05D006667 1.2e-97 361.3 401 51.9
Sed0012109 Sechium edule HOM05D005563 ORTHO05D006667 3.0e-96 356.7 332 57.8
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 5.1e-96 355.9 381 52.5
Peaxi162Scf00078g01133 Petunia axillaris HOM05D005563 ORTHO05D006667 1.5e-95 354.4 347 55.6
AUR62023340 Chenopodium quinoa HOM05D005563 ORTHO05D006667 7.3e-95 352.1 421 48.9
HanXRQChr15g0488461 Helianthus annuus HOM05D005563 ORTHO05D006667 1.7e-91 340.9 363 51.8
MELO3C022956.2 Cucumis melo HOM05D005563 ORTHO05D006667 6.4e-91 339.0 357 52.9
Gohir.A05G248000 Gossypium hirsutum HOM05D005563 ORTHO05D006667 1.4e-90 337.8 317 55.2
ATR0580G344 Amborella trichopoda HOM05D005563 ORTHO05D006667 1.3e-88 331.3 428 45.8
Gohir.D05G248801 Gossypium hirsutum HOM05D005563 ORTHO05D006667 1.3e-88 331.3 317 54.9
AUR62013814 Chenopodium quinoa HOM05D005563 ORTHO05D006667 5.6e-87 325.9 507 40.6
FAN19G1429 Fragaria x ananassa HOM05D005563 ORTHO05D006667 7.1e-82 308.9 436 45.4
TPR.G11352 Trifolium pratense HOM05D005563 ORTHO05D006667 5.1e-80 302.8 321 53.6
BcaB03g14888 Brassica carinata HOM05D005563 ORTHO05D006667 1.1e-74 285.0 356 46.6
Eucgr.C03620 Eucalyptus grandis HOM05D005563 ORTHO05D006667 2.3e-72 277.3 288 54.2
AUR62037990 Chenopodium quinoa HOM05D005563 ORTHO05D006667 1.3e-70 271.6 317 46.7
EL10Ac1g00691 Beta vulgaris HOM05D005563 ORTHO05D006667 4.8e-70 269.6 376 43.9
Sc19g0006900 Simmondsia chinensis HOM05D005563 ORTHO05D006667 1.3e-67 261.5 282 50.7
COL.COLO4_34067 Corchorus olitorius HOM05D005563 ORTHO05D006667 5.5e-66 256.1 314 48.4
Ca_17321_v3 Cicer arietinum L. HOM05D005563 ORTHO05D006667 4.8e-62 243.0 327 48.0
SMO356G0078 Selaginella moellendorffii HOM05D005563 ORTHO05D006667 1.9e-55 221.1 409 36.4
Cpa.g.sc249.8 Carica papaya HOM05D005563 ORTHO05D006667 3.3e-55 220.3 166 64.5
Mapoly0019s0003 Marchantia polymorpha HOM05D005563 ORTHO05D006667 4.3e-55 219.9 418 37.1
BolC6t39597H Brassica oleracea HOM05D005563 ORTHO05D006667 2.4e-53 214.2 320 41.2
AagrBONN_evm.TU.Sc2ySwM_344.1216 Anthoceros agrestis HOM05D005563 ORTHO05D006667 9.1e-53 212.2 481 33.3
Pp3c5_5220 Physcomitrium patens HOM05D005563 ORTHO05D006667 3.4e-52 210.3 394 36.3
SHI17431 Sapria himalayana HOM05D005563 ORTHO05D006667 8.5e-51 205.7 276 43.1
CDE04G2046 Ceratophyllum demersum HOM05D005563 ORTHO05D006667 5.5e-50 203.0 283 45.2
HPP92_009712 Vanilla planifolia HOM05D005563 ORTHO05D006667 4.6e-49 199.9 258 46.1
Actinidia03534 Actinidia chinensis HOM05D005563 ORTHO05D006667 1.1e-42 178.7 238 46.2
Zm00001eb088860 Zea mays HOM05D005563 ORTHO05D006667 2.5e-42 177.6 272 41.2
Eucgr.C03478 Eucalyptus grandis HOM05D005563 ORTHO05D006667 1.3e-38 165.2 245 43.3
MBI08_g10505_MAGBIO Magnolia biondii HOM05D000152 ORTHO05D006667 1.5e-34 151.8 90 75.6
MBI14_g20078_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 3.2e-34 150.6 85 77.6
MBI13_g08747_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 2.7e-33 147.5 92 70.7
TPR.G11340 Trifolium pratense HOM05D005563 ORTHO05D006667 8.0e-33 146.0 74 87.8
MCO11G544 Micromonas commoda HOM05D005563 ORTHO05D006667 1.4e-32 145.2 369 30.4
MBI15_g36474_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 4.0e-32 143.7 91 70.3
Eucgr.L00998 Eucalyptus grandis HOM05D005563 ORTHO05D006667 1.7e-30 138.3 200 42.5
Eucgr.C03640 Eucalyptus grandis HOM05D005563 ORTHO05D006667 7.0e-29 132.9 86 67.4
Thecc.10G189600 Theobroma cacao HOM05D005563 ORTHO05D006667 7.7e-28 129.4 109 59.6
CBR_g50242 Chara braunii HOM05D005563 ORTHO05D006667 9.4e-26 122.5 592 23.8
C06p46160 Brassica napus HOM05D005563 ORTHO05D006667 8.8e-24 115.9 204 38.7
DCAR_001179 Daucus carota HOM05D005563 ORTHO05D006667 2.0e-23 114.8 166 42.8
CBR_g8323 Chara braunii HOM05D005563 ORTHO05D006667 6.3e-22 109.8 169 37.9
Cre10.g439200 Chlamydomonas reinhardtii HOM05D005563 ORTHO05D006667 1.2e-20 105.5 446 25.1
FAN20G2324 Fragaria x ananassa HOM05D005563 ORTHO05D006667 6.5e-19 99.8 54 79.6
Eucgr.C03636 Eucalyptus grandis HOM05D005563 ORTHO05D006667 1.5e-15 88.6 136 42.6
Thecc.10G189700 Theobroma cacao HOM05D005563 ORTHO05D006667 4.4e-15 87.0 114 44.7
Haze_14787 Corylus avellana HOM05D005563 ORTHO05D006667 8.3e-14 82.8 83 51.8
PRCOL_00003298 Prasinoderma coloniale HOM05D005563 ORTHO05D006667 1.2e-12 79.0 88 43.2
Actinidia28221 Actinidia chinensis HOM05D005563 ORTHO05D006667 7.8e-12 76.3 75 56.0
SHI17433 Sapria himalayana HOM05D005563 ORTHO05D006667 4.7e-09 67.0 61 50.8


User provided reference genes

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