Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07721 Vaccinium macrocarpon HOM05D007419 ORTHO05D009327 0.0e+00 1966.0 973 100.0
Rhsim01G0061500 Rhododendron simsii HOM05D007419 ORTHO05D009327 0.0e+00 1411.0 1020 71.7
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 1.6e-260 903.3 1019 49.8
Lj7A626G73 Lonicera japonica HOM05D007419 ORTHO05D009327 3.4e-258 895.6 1034 48.2
Cfa003423 Carpinus fangiana HOM05D007419 ORTHO05D009327 5.3e-251 871.7 1015 47.3
Haze_25509 Corylus avellana HOM05D007419 ORTHO05D009327 4.3e-245 852.0 1065 46.0
QL09p047694 Quercus lobata HOM05D007419 ORTHO05D009327 1.4e-240 837.0 1015 46.2
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 5.1e-238 828.6 995 48.1
MD15G1166600 Malus domestica HOM05D007419 ORTHO05D009327 2.2e-236 823.2 1013 46.5
DCAR_014901 Daucus carota HOM05D007419 ORTHO05D009327 1.1e-235 820.8 1013 44.7
FAN19G0754 Fragaria x ananassa HOM05D007419 ORTHO05D009327 9.1e-235 817.8 1013 44.9
Potri.018G126300 Populus trichocarpa HOM05D007419 ORTHO05D009327 2.0e-234 816.6 1015 46.3
FvH4_1g02590 Fragaria vesca HOM05D007419 ORTHO05D009327 5.9e-234 815.1 1014 45.0
Actinidia21952 Actinidia chinensis HOM05D007419 ORTHO05D009327 1.3e-233 813.9 805 55.8
RcHm_v2.0_Chr2g0087621 Rosa chinensis HOM05D007419 ORTHO05D009327 1.4e-232 810.4 1014 44.9
Thecc.09G132300 Theobroma cacao HOM05D007419 ORTHO05D009327 1.9e-232 810.1 1010 46.5
CANSAT11G1590 Cannabis sativa HOM05D007419 ORTHO05D009327 2.7e-231 806.2 1019 45.1
COL.COLO4_35160 Corchorus olitorius HOM05D007419 ORTHO05D009327 1.8e-230 803.5 1013 44.9
FAN28G1883 Fragaria x ananassa HOM05D007419 ORTHO05D009327 3.3e-229 799.3 1014 44.3
FAN26G2390 Fragaria x ananassa HOM05D007419 ORTHO05D009327 1.1e-227 794.3 1014 44.2
Atru.chr7.1950 Acer truncatum HOM05D007419 ORTHO05D009327 7.7e-226 788.1 962 46.5
Sabra18G0107200 Salix brachista HOM05D007419 ORTHO05D009327 1.7e-225 786.9 1016 45.4
Prupe.7G248700 Prunus persica HOM05D007419 ORTHO05D009327 3.8e-225 785.8 1014 45.3
Gorai.013G235200 Gossypium raimondii HOM05D007419 ORTHO05D009327 3.6e-223 779.2 1006 45.3
Gohir.A13G200700 Gossypium hirsutum HOM05D007419 ORTHO05D009327 5.3e-219 765.4 1005 45.0
Aqoxy7G03635 Aquilegia oxysepala HOM05D007419 ORTHO05D009327 6.8e-214 748.4 1048 43.8
Lj4g0016099 Lotus japonicus HOM05D007419 ORTHO05D009327 1.5e-213 747.3 1017 42.9
Glyma.17G111300 Glycine max HOM05D007419 ORTHO05D009327 4.8e-212 742.3 1016 42.3
Medtr4g115340 Medicago truncatula HOM05D007419 ORTHO05D009327 1.8e-211 740.3 1013 42.5
arahy.Tifrunner.gnm1.ann1.XRJX6H Arachis hypogaea HOM05D007419 ORTHO05D009327 3.5e-210 736.1 1011 42.5
arahy.Tifrunner.gnm1.ann1.SLI0XQ Arachis hypogaea HOM05D007419 ORTHO05D009327 5.9e-210 735.3 1011 42.5
Ca_06942_v3 Cicer arietinum L. HOM05D007419 ORTHO05D009327 3.6e-207 726.1 1013 42.1
TPR.G24826 Trifolium pratense HOM05D007419 ORTHO05D009327 2.3e-206 723.4 1016 41.1
Sed0020697 Sechium edule HOM05D007419 ORTHO05D009327 2.0e-205 720.3 1012 42.7
Phvul.003G168900 Phaseolus vulgaris HOM05D007419 ORTHO05D009327 1.4e-203 714.1 1011 41.8
Lalb_Chr13g0301571 Lupinus albus HOM05D007419 ORTHO05D009327 5.4e-203 712.2 1017 41.8
ClCG06G011500 Citrullus lanatus HOM05D007419 ORTHO05D009327 1.3e-201 707.6 1012 42.4
VMungo1215G0197 Vigna mungo HOM05D007419 ORTHO05D009327 2.3e-201 706.8 1004 40.9
GSVIVG01015591001 Vitis vinifera HOM05D007419 ORTHO05D009327 8.6e-201 704.9 822 48.1
Migut.K00424 Erythranthe guttata HOM05D007419 ORTHO05D009327 2.0e-194 683.7 1005 41.6
Cc06_g08060 Coffea canephora HOM05D007419 ORTHO05D009327 6.6e-193 678.7 1014 40.1
MELO3C029461.2 Cucumis melo HOM05D007419 ORTHO05D009327 1.9e-192 677.2 1013 41.3
Nitab4.5_0003393g0060 Nicotiana tabacum HOM05D007419 ORTHO05D009327 3.3e-192 676.4 1013 40.6
SalBow1G7934 Salvia bowleyana HOM05D007419 ORTHO05D009327 4.3e-192 676.0 1048 39.6
AUR62013308 Chenopodium quinoa HOM05D007419 ORTHO05D009327 9.5e-192 674.9 1001 39.6
Peaxi162Scf00088g01333 Petunia axillaris HOM05D007419 ORTHO05D009327 8.0e-191 671.8 1014 40.7
PGSC0003DMG400030908 Solanum tuberosum HOM05D007419 ORTHO05D009327 2.0e-189 667.2 1010 40.6
HanXRQChr12g0356641 Helianthus annuus HOM05D007419 ORTHO05D009327 2.0e-186 657.1 992 40.3
Sopen07g003800 Solanum pennellii HOM05D007419 ORTHO05D009327 2.0e-186 657.1 1009 39.8
Solyc07g007920.3 Solanum lycopersicum HOM05D007419 ORTHO05D009327 3.3e-184 649.8 1010 39.5
ECA234G0484 Erigeron canadensis HOM05D007419 ORTHO05D009327 4.7e-183 646.0 992 40.6
CAN.G1315.3 Capsicum annuum HOM05D007419 ORTHO05D009327 2.3e-182 643.7 997 39.8
Ah.09g224820 Amaranthus hybridus HOM05D007419 ORTHO05D009327 2.9e-180 636.7 996 37.8
SGA_v2.0_scaffold109G31074 Striga asiatica HOM05D007419 ORTHO05D009327 4.9e-180 636.0 1005 39.5
Lsat_1_v5_gn_5_91781 Lactuca sativa HOM05D007419 ORTHO05D009327 4.1e-179 632.9 984 39.3
CsaV3_1G026730 Cucumis sativus L. HOM05D007419 ORTHO05D009327 1.2e-170 604.7 1011 39.3
TWI34G0413 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 6.6e-169 599.0 868 40.7
Gohir.D13G206200 Gossypium hirsutum HOM05D007419 ORTHO05D009327 1.1e-163 581.6 741 44.5
QL09p047989 Quercus lobata HOM05D007419 ORTHO05D009327 3.2e-163 580.1 978 37.7
Manes.06G047100 Manihot esculenta HOM05D007419 ORTHO05D009327 1.6e-162 577.8 755 42.6
Nn8g39549 Nelumbo nucifera HOM05D007419 ORTHO05D009327 8.7e-161 572.0 780 42.8
Glyma.13G160200 Glycine max HOM05D007419 ORTHO05D009327 1.4e-155 554.7 969 37.4
Nitab4.5_0002008g0040 Nicotiana tabacum HOM05D007419 ORTHO05D009327 1.4e-155 554.7 1013 35.7
ATR0800G079 Amborella trichopoda HOM05D007419 ORTHO05D009327 7.1e-155 552.4 1032 35.6
Psat4g039120 Pisum sativum HOM05D007419 ORTHO05D009327 1.2e-146 525.0 657 43.5
Sc08g0006270 Simmondsia chinensis HOM05D007419 ORTHO05D009327 4.3e-144 516.5 836 37.3
Duzib168G0167 Durio zibethinus HOM05D007419 ORTHO05D009327 7.4e-144 515.8 994 36.2
Eucgr.C01385 Eucalyptus grandis HOM05D007419 ORTHO05D009327 4.9e-140 503.1 796 38.8
SEGI_05905 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 6.7e-129 466.1 1055 30.6
SEGI_33879 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 6.7e-129 466.1 1055 30.6
MBI15_g15110_MAGBIO Magnolia biondii HOM05D007419 ORTHO05D009327 1.1e-128 465.3 795 38.5
FAN23G1807 Fragaria x ananassa HOM05D007419 ORTHO05D009327 1.1e-126 458.8 991 34.4
Os06g0173000 Oryza sativa ssp. japonica HOM05D007419 ORTHO05D009327 2.9e-92 344.4 979 28.1
QL09p047847 Quercus lobata HOM05D007419 ORTHO05D009327 2.3e-89 334.7 996 29.5
Hund26535 Selenicereus undatus HOM05D007419 ORTHO05D009327 4.4e-72 277.3 355 46.2
Zm00001eb375320 Zea mays HOM05D007419 ORTHO05D009327 1.6e-69 268.9 905 26.1
MD15G1167400 Malus domestica HOM05D007419 ORTHO05D009327 6.6e-60 236.9 252 51.2
CAN.G778.5 Capsicum annuum HOM05D007419 ORTHO05D009327 1.1e-57 229.6 223 53.8
Oeu012224.2 Olea europaea HOM05D007419 ORTHO05D009327 3.1e-57 228.0 443 34.3
AUR62011176 Chenopodium quinoa HOM05D007419 ORTHO05D009327 4.2e-54 217.6 253 47.0
SMO340G0190 Selaginella moellendorffii HOM05D007419 ORTHO05D009327 1.7e-52 212.2 950 24.1
Actinidia21951 Actinidia chinensis HOM05D007419 ORTHO05D009327 1.4e-49 202.6 182 60.4
GSVIVG01015592001 Vitis vinifera HOM05D007419 ORTHO05D009327 2.6e-48 198.4 193 54.9
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 2.7e-45 188.3 423 32.2
QL09p046570 Quercus lobata HOM05D007419 ORTHO05D009327 1.9e-43 182.2 415 31.6
CSS0048092 Camellia sinensis var. sinensis HOM05D007419 ORTHO05D009327 4.8e-42 177.6 141 65.2
Psat4g039080 Pisum sativum HOM05D007419 ORTHO05D009327 6.2e-42 177.2 240 42.1
Gohir.D13G206300 Gossypium hirsutum HOM05D007419 ORTHO05D009327 7.6e-40 170.2 180 53.9
SEGI_04675 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 5.1e-36 157.5 370 27.8
CBR_g6680 Chara braunii HOM05D007419 ORTHO05D009327 1.1e-30 139.8 1049 20.8
SEGI_28656 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 1.9e-30 139.0 793 24.3
Oeu038257.1 Olea europaea HOM05D007419 ORTHO05D009327 1.0e-28 133.3 97 69.1
MSTRG.26436 Avicennia marina HOM05D007419 ORTHO05D009327 3.0e-28 131.7 137 50.4
TWI34G1676 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 1.3e-26 126.3 147 49.7
Eucgr.C01386 Eucalyptus grandis HOM05D007419 ORTHO05D009327 1.2e-24 119.8 128 50.8
MD08G1122800 Malus domestica HOM05D007419 ORTHO05D009327 1.9e-14 85.9 53 75.5
Hund30789 Selenicereus undatus HOM05D007419 ORTHO05D009327 1.7e-10 72.8 164 32.9
QL09p046488 Quercus lobata HOM05D007419 ORTHO05D009327 4.1e-09 68.2 47 63.8
QL09p046563 Quercus lobata HOM05D007419 ORTHO05D009327 4.1e-09 68.2 47 63.8
EL10Ac8g18720 Beta vulgaris HOM05D007419 ORTHO05D009327 2.0e-08 65.9 42 69.0
Medtr7g110110 Medicago truncatula HOM05D007419 ORTHO05D009327 5.9e-08 64.3 121 31.4


User provided reference genes

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