Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07595 Vaccinium macrocarpon HOM05D006876 ORTHO05D008708 2.4e-153 545.4 270 100.0
RhsimUnG0021300 Rhododendron simsii HOM05D006876 ORTHO05D008708 3.4e-115 418.7 275 80.0
CSS0024544 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 1.2e-91 340.5 270 67.4
Dinv13650 Davidia involucrata HOM05D006876 ORTHO05D008708 3.0e-79 299.3 271 62.4
ClCG04G005040 Citrullus lanatus HOM05D006876 ORTHO05D008708 1.8e-76 290.0 279 60.2
CsaV3_4G029000 Cucumis sativus L. HOM05D006876 ORTHO05D008708 1.3e-74 283.9 277 58.5
MELO3C019167.2 Cucumis melo HOM05D006876 ORTHO05D008708 2.9e-74 282.7 277 58.5
FAN19G1913 Fragaria x ananassa HOM05D006876 ORTHO05D008708 3.8e-74 282.3 273 57.9
Hma1.2p1_0694F.1_g204340 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 3.8e-74 282.3 282 58.2
FAN28G2491 Fragaria x ananassa HOM05D006876 ORTHO05D008708 9.4e-73 277.7 275 57.1
Prupe.7G023500 Prunus persica HOM05D006876 ORTHO05D008708 2.1e-72 276.6 271 57.2
Cpa.g.sc33.174 Carica papaya HOM05D006876 ORTHO05D008708 2.7e-72 276.2 271 57.2
Cfa019902 Carpinus fangiana HOM05D006876 ORTHO05D008708 2.7e-72 276.2 239 61.1
CiPaw.09G161500 Carya illinoinensis HOM05D006876 ORTHO05D008708 4.7e-72 275.4 236 60.2
MD12G1111100 Malus domestica HOM05D006876 ORTHO05D008708 3.0e-71 272.7 269 55.8
CANSAT78G2074 Cannabis sativa HOM05D006876 ORTHO05D008708 3.9e-71 272.3 272 55.9
Gorai.010G139600 Gossypium raimondii HOM05D006876 ORTHO05D008708 5.1e-71 271.9 271 57.6
PSO339G4949 Papaver somniferum HOM05D006876 ORTHO05D008708 6.7e-71 271.6 271 55.4
Gohir.A13G086570 Gossypium hirsutum HOM05D006876 ORTHO05D008708 8.8e-71 271.2 270 57.8
Manes.09G001600 Manihot esculenta HOM05D006876 ORTHO05D008708 8.8e-71 271.2 272 55.5
QL07p015416 Quercus lobata HOM05D006876 ORTHO05D008708 1.5e-70 270.4 270 56.3
Atru.chr8.919 Acer truncatum HOM05D006876 ORTHO05D008708 2.0e-70 270.0 271 56.1
Nitab4.5_0002131g0070 Nicotiana tabacum HOM05D006876 ORTHO05D008708 2.6e-70 269.6 270 57.4
Peaxi162Scf00003g05358 Petunia axillaris HOM05D006876 ORTHO05D008708 2.6e-70 269.6 270 58.9
PGSC0003DMG400007191 Solanum tuberosum HOM05D006876 ORTHO05D008708 3.3e-70 269.2 273 56.8
Sed0006068 Sechium edule HOM05D006876 ORTHO05D008708 4.4e-70 268.9 273 55.7
Solyc10g076930.2 Solanum lycopersicum HOM05D006876 ORTHO05D008708 4.4e-70 268.9 270 57.0
PGR142G2444 Punica granatum HOM05D006876 ORTHO05D008708 5.7e-70 268.5 277 57.0
Thecc.05G117700 Theobroma cacao HOM05D006876 ORTHO05D008708 5.7e-70 268.5 271 57.6
Sopen10g028620 Solanum pennellii HOM05D006876 ORTHO05D008708 9.7e-70 267.7 270 57.0
SalBow1G4764 Salvia bowleyana HOM05D006876 ORTHO05D008708 8.2e-69 264.6 269 54.3
Gohir.D13G092600 Gossypium hirsutum HOM05D006876 ORTHO05D008708 1.1e-68 264.2 271 56.1
COL.COLO4_21445 Corchorus olitorius HOM05D006876 ORTHO05D008708 1.8e-68 263.5 270 54.4
Haze_20349 Corylus avellana HOM05D006876 ORTHO05D008708 4.1e-68 262.3 253 57.3
Duzib114G0933 Durio zibethinus HOM05D006876 ORTHO05D008708 4.1e-68 262.3 271 56.5
THA.LOC104803253 Tarenaya hassleriana HOM05D006876 ORTHO05D008708 7.0e-68 261.5 239 57.3
Cc06_g21190 Coffea canephora HOM05D006876 ORTHO05D008708 9.1e-68 261.2 281 55.9
Nitab4.5_0000123g0090 Nicotiana tabacum HOM05D006876 ORTHO05D008708 1.5e-67 260.4 270 55.6
Potri.006G026300 Populus trichocarpa HOM05D006876 ORTHO05D008708 2.0e-67 260.0 271 53.9
RcHm_v2.0_Chr7g0183121 Rosa chinensis HOM05D006876 ORTHO05D008708 2.0e-67 260.0 273 55.7
MSTRG.10760 Avicennia marina HOM05D006876 ORTHO05D008708 3.5e-67 259.2 270 55.2
EL10Ac3g07376 Beta vulgaris HOM05D006876 ORTHO05D008708 1.7e-66 256.9 273 55.7
Ciclev10012641m.g Citrus clementina HOM05D006876 ORTHO05D008708 2.2e-66 256.5 271 55.4
Ah.13g077470 Amaranthus hybridus HOM05D006876 ORTHO05D008708 5.0e-66 255.4 271 54.6
SGA_v2.0_scaffold123G33492 Striga asiatica HOM05D001269 ORTHO05D001083 6.5e-66 255.0 270 54.1
Hund24486 Selenicereus undatus HOM05D006876 ORTHO05D008708 9.4e-65 251.1 271 53.1
PSO384G4569 Papaver somniferum HOM05D006876 ORTHO05D008708 2.1e-64 250.0 271 50.9
Lsat_1_v5_gn_6_24200 Lactuca sativa HOM05D006876 ORTHO05D008708 4.7e-64 248.8 272 51.1
Migut.K00190 Erythranthe guttata HOM05D006876 ORTHO05D008708 1.0e-63 247.7 234 56.4
Sabra06G0019500 Salix brachista HOM05D006876 ORTHO05D008708 1.4e-63 247.3 271 52.0
MBI19_g10813_MAGBIO Magnolia biondii HOM05D006876 ORTHO05D008708 2.0e-62 243.4 272 52.9
TWI53G1364 Tripterygium wilfordii HOM05D006876 ORTHO05D008708 7.4e-62 241.5 273 50.2
Sp5g05770 Schrenkiella parvula HOM05D006876 ORTHO05D008708 9.7e-62 241.1 229 56.3
BcaC07g40117 Brassica carinata HOM05D006876 ORTHO05D008708 1.3e-61 240.7 244 54.5
GSVIVG01025828001 Vitis vinifera HOM05D006876 ORTHO05D008708 1.7e-61 240.4 271 51.7
Sc19g0007790 Simmondsia chinensis HOM05D006876 ORTHO05D008708 2.2e-61 240.0 247 53.4
Aa31LG10G11670 Aethionema arabicum HOM05D006876 ORTHO05D008708 8.2e-61 238.0 229 56.8
AL5G38200 Arabidopsis lyrata HOM05D006876 ORTHO05D008708 8.2e-61 238.0 226 58.0
Carub.0005s2355 Capsella rubella HOM05D006876 ORTHO05D008708 8.2e-61 238.0 229 56.3
BraA09t40417Z Brassica rapa HOM05D006876 ORTHO05D008708 1.1e-60 237.7 232 55.6
CARHR166970 Cardamine hirsuta HOM05D006876 ORTHO05D008708 1.4e-60 237.3 237 56.5
unitig_899.g15477 Utricularia gibba HOM05D006876 ORTHO05D008708 1.4e-60 237.3 271 52.0
Thhalv10006232m.g Eutrema salsugineum HOM05D006876 ORTHO05D008708 4.1e-60 235.7 230 56.5
BcaC07g39992 Brassica carinata HOM05D006876 ORTHO05D008708 7.0e-60 235.0 229 55.9
A09p49640 Brassica napus HOM05D006876 ORTHO05D008708 9.1e-60 234.6 269 50.6
Lalb_Chr24g0400801 Lupinus albus HOM05D006876 ORTHO05D008708 9.1e-60 234.6 230 55.2
C08p32050 Brassica napus HOM05D006876 ORTHO05D008708 1.6e-59 233.8 229 55.9
BolC8t50823H Brassica oleracea HOM05D006876 ORTHO05D008708 1.6e-59 233.8 229 55.9
arahy.Tifrunner.gnm1.ann1.SXUX32 Arachis hypogaea HOM05D006876 ORTHO05D008708 2.0e-59 233.4 235 52.8
AUR62020968 Chenopodium quinoa HOM05D006876 ORTHO05D008708 2.0e-59 233.4 254 51.6
Phvul.001G101300 Phaseolus vulgaris HOM05D006876 ORTHO05D008708 2.6e-59 233.0 270 50.0
arahy.Tifrunner.gnm1.ann1.U8TZLL Arachis hypogaea HOM05D006876 ORTHO05D008708 7.7e-59 231.5 235 52.3
Migut.K00192 Erythranthe guttata HOM05D006876 ORTHO05D008708 8.5e-58 228.0 219 55.3
Lj1g0024709 Lotus japonicus HOM05D006876 ORTHO05D008708 1.9e-57 226.9 232 54.7
AT3G56820 Arabidopsis thaliana HOM05D006876 ORTHO05D008708 3.2e-57 226.1 234 54.7
Medtr7g088040 Medicago truncatula HOM05D006876 ORTHO05D008708 4.2e-57 225.7 228 52.6
Hund24492 Selenicereus undatus HOM05D006876 ORTHO05D008708 5.5e-57 225.3 233 54.5
Eucgr.K01704 Eucalyptus grandis HOM05D006876 ORTHO05D008708 1.2e-56 224.2 271 48.7
Glyma.03G003700 Glycine max HOM05D006876 ORTHO05D008708 1.6e-56 223.8 224 51.3
TAR623G1567 Trochodendron aralioides HOM05D006876 ORTHO05D008708 2.1e-56 223.4 184 61.4
Glyma.19G122400 Glycine max HOM05D006876 ORTHO05D008708 3.0e-55 219.5 230 50.9
VMungo1383G0045 Vigna mungo HOM05D006876 ORTHO05D008708 3.0e-55 219.5 229 52.0
Nn7g37203 Nelumbo nucifera HOM05D006876 ORTHO05D008708 6.8e-55 218.4 248 53.6
Aqoxy1G01501 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 4.4e-54 215.7 259 51.7
arahy.Tifrunner.gnm1.ann1.R6YTNA Arachis hypogaea HOM05D006876 ORTHO05D008708 2.4e-52 209.9 225 50.2
Os01g0810200 Oryza sativa ssp. japonica HOM05D006876 ORTHO05D008708 9.1e-52 208.0 272 46.3
Zm00001eb150270 Zea mays HOM05D006876 ORTHO05D008708 4.5e-51 205.7 272 47.8
CSS0021314 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 5.2e-47 192.2 109 80.7
Oeu032953.2 Olea europaea HOM05D006876 ORTHO05D008708 5.2e-47 192.2 328 42.7
Psat3g083640 Pisum sativum HOM05D006876 ORTHO05D008708 6.8e-47 191.8 160 60.6
FvH4_1g29600 Fragaria vesca HOM05D006876 ORTHO05D008708 5.7e-46 188.7 206 54.4
Lj4A828G46 Lonicera japonica HOM05D006876 ORTHO05D008708 1.7e-45 187.2 118 72.0
Aqoxy1G01505 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 2.2e-45 186.8 149 61.7
Hma1.2p1_0694F.1_g204350 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 2.2e-45 186.8 106 80.2
ATR1096G134 Amborella trichopoda HOM05D006876 ORTHO05D008708 6.3e-45 185.3 276 43.1
DCAR_020618 Daucus carota HOM05D006876 ORTHO05D008708 5.0e-42 175.6 110 73.6
ECA233G0065 Erigeron canadensis HOM05D000444 ORTHO05D000489 1.9e-41 173.7 108 68.5
SEGI_40976 Sequoiadendron giganteum HOM05D006876 ORTHO05D008708 8.0e-40 168.3 150 52.7
Actinidia37859 Actinidia chinensis HOM05D006876 ORTHO05D008708 7.5e-38 161.8 87 86.2
QL05p001451 Quercus lobata HOM05D006876 ORTHO05D008708 1.2e-32 144.4 98 71.4
Lalb_Chr02g0157641 Lupinus albus HOM05D006876 ORTHO05D008708 2.3e-31 140.2 217 40.6
arahy.Tifrunner.gnm1.ann1.S4H51W Arachis hypogaea HOM05D006876 ORTHO05D008708 6.6e-26 122.1 157 41.4
arahy.Tifrunner.gnm1.ann1.8Z6XIB Arachis hypogaea HOM05D006876 ORTHO05D008708 4.4e-22 109.4 96 55.2
arahy.Tifrunner.gnm1.ann1.QI3NWI Arachis hypogaea HOM05D006876 ORTHO05D008708 1.3e-21 107.8 95 53.7
arahy.Tifrunner.gnm1.ann1.ERVJ4V Arachis hypogaea HOM05D006876 ORTHO05D008708 2.2e-21 107.1 207 33.3
DCAR_020619 Daucus carota HOM05D006876 ORTHO05D008708 1.9e-20 104.0 149 47.0
CBR_g17867 Chara braunii HOM05D006876 ORTHO05D008708 2.1e-19 100.5 139 38.8
QL05p001731 Quercus lobata HOM05D006876 ORTHO05D008708 2.1e-19 100.5 60 76.7
QL05p085390 Quercus lobata HOM05D006876 ORTHO05D008708 2.1e-19 100.5 60 76.7
Ca_08331_v3 Cicer arietinum L. HOM05D006876 ORTHO05D008708 1.5e-17 94.4 66 68.2
Oeu007164.1 Olea europaea HOM05D006876 ORTHO05D008708 4.7e-16 89.4 82 53.7
Oeu039192.1 Olea europaea HOM05D006876 ORTHO05D008708 8.1e-16 88.6 146 46.6
MCO02G060 Micromonas commoda HOM05D006876 ORTHO05D008708 7.6e-14 82.0 109 40.4
arahy.Tifrunner.gnm1.ann1.Q5BN79 Arachis hypogaea HOM05D006876 ORTHO05D008708 4.6e-11 72.8 76 50.0
Glyma.10G143650 Glycine max HOM05D006876 ORTHO05D008708 8.6e-10 68.6 43 65.1
C06p23790 Brassica napus HOM05D006876 ORTHO05D040197 3.1e-07 60.1 53 60.4
BolC6t37548H Brassica oleracea HOM05D006876 ORTHO05D040197 5.2e-07 59.3 53 58.5


User provided reference genes

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