Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07528 Vaccinium macrocarpon HOM05D007071 ORTHO05D008677 3.0e-185 651.7 334 100.0
Actinidia37784 Actinidia chinensis HOM05D007071 ORTHO05D008677 3.8e-108 395.6 342 64.9
Rhsim03G0057500 Rhododendron simsii HOM05D007071 ORTHO05D008677 1.1e-102 377.5 305 70.8
Dinv25088 Davidia involucrata HOM05D007071 ORTHO05D008677 3.5e-101 372.5 334 64.1
Duzib093G1750 Durio zibethinus HOM05D007071 ORTHO05D008677 7.0e-86 321.6 347 52.7
TWI77G0807 Tripterygium wilfordii HOM05D007071 ORTHO05D008677 8.6e-84 314.7 342 55.6
Potri.016G064200 Populus trichocarpa HOM05D007071 ORTHO05D008677 1.9e-83 313.5 342 52.6
Gorai.006G146400 Gossypium raimondii HOM05D007071 ORTHO05D008677 3.3e-83 312.8 347 51.3
Nn2g14444 Nelumbo nucifera HOM05D007071 ORTHO05D008677 9.5e-83 311.2 343 52.8
Sabra16G0066300 Salix brachista HOM05D007071 ORTHO05D008677 2.8e-82 309.7 382 48.4
Gohir.D09G127800 Gossypium hirsutum HOM05D007071 ORTHO05D008677 2.3e-81 306.6 346 52.0
Gohir.A09G131600 Gossypium hirsutum HOM05D007071 ORTHO05D008677 1.5e-80 303.9 347 51.0
PSO339G2219 Papaver somniferum HOM05D007071 ORTHO05D008677 4.9e-79 298.9 346 52.9
Cpa.g.sc222.1 Carica papaya HOM05D007071 ORTHO05D008677 8.3e-79 298.1 339 51.3
Cfa020101 Carpinus fangiana HOM05D007071 ORTHO05D008677 1.8e-78 297.0 335 51.3
GSVIVG01022502001 Vitis vinifera HOM05D007071 ORTHO05D008677 5.4e-78 295.4 333 53.8
CiPaw.09G025100 Carya illinoinensis HOM05D007071 ORTHO05D008677 1.6e-77 293.9 338 53.3
CANSAT64G1821 Cannabis sativa HOM05D007071 ORTHO05D008677 1.3e-76 290.8 343 52.5
Manes.08G038400 Manihot esculenta HOM05D007071 ORTHO05D008677 1.3e-76 290.8 343 51.9
PGR004G1089 Punica granatum HOM05D007071 ORTHO05D008677 1.6e-74 283.9 335 49.6
Sed0020351 Sechium edule HOM05D007071 ORTHO05D008677 2.8e-74 283.1 342 48.8
CsaV3_3G038410 Cucumis sativus L. HOM05D007071 ORTHO05D008677 6.2e-74 282.0 346 50.0
MELO3C009585.2 Cucumis melo HOM05D007071 ORTHO05D008677 1.0e-73 281.2 345 49.9
Atru.chr8.1251 Acer truncatum HOM05D007071 ORTHO05D008677 1.4e-73 280.8 323 52.3
Aqoxy2G00613 Aquilegia oxysepala HOM05D007071 ORTHO05D008677 2.3e-73 280.0 333 50.2
Lj1g0020560 Lotus japonicus HOM05D007071 ORTHO05D008677 5.2e-73 278.9 341 50.4
MBI11_g24568_MAGBIO Magnolia biondii HOM05D007071 ORTHO05D008677 5.2e-73 278.9 384 45.6
QL07p025881 Quercus lobata HOM05D007071 ORTHO05D008677 3.5e-69 266.2 340 49.4
Sc01g0005210 Simmondsia chinensis HOM05D007071 ORTHO05D008677 1.7e-68 263.8 351 47.0
VMungo1383G1243 Vigna mungo HOM05D007071 ORTHO05D008677 3.0e-68 263.1 343 45.8
ClCG10G017880 Citrullus lanatus HOM05D007071 ORTHO05D008677 5.0e-68 262.3 405 43.2
THA.LOC104809942 Tarenaya hassleriana HOM05D007071 ORTHO05D008677 1.5e-67 260.8 340 45.6
Glyma.19G203500 Glycine max HOM05D007071 ORTHO05D008677 2.5e-67 260.0 338 45.0
Glyma.03G206000 Glycine max HOM05D007071 ORTHO05D008677 2.1e-66 256.9 338 45.3
Nitab4.5_0000117g0100 Nicotiana tabacum HOM05D007071 ORTHO05D008677 4.0e-65 252.7 351 45.0
HanXRQChr11g0347671 Helianthus annuus HOM05D007071 ORTHO05D008677 5.2e-65 252.3 336 47.9
C09p70180 Brassica napus HOM05D007071 ORTHO05D008677 5.8e-64 248.8 344 43.6
Medtr7g107150 Medicago truncatula HOM05D007071 ORTHO05D008677 5.8e-64 248.8 331 47.7
ECA248G1335 Erigeron canadensis HOM05D007071 ORTHO05D008677 7.5e-64 248.4 337 47.5
AL6G16680 Arabidopsis lyrata HOM05D007071 ORTHO05D008677 1.3e-63 247.7 335 43.3
BolC9t59762H Brassica oleracea HOM05D007071 ORTHO05D008677 1.3e-63 247.7 344 43.6
Thhalv10014151m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 2.9e-63 246.5 335 44.2
A10p29800 Brassica napus HOM05D007071 ORTHO05D008677 3.7e-63 246.1 345 43.8
Carub.0006s0547 Capsella rubella HOM05D007071 ORTHO05D008677 3.7e-63 246.1 336 43.8
Aa31sc291G40 Aethionema arabicum HOM05D007071 ORTHO05D008677 6.4e-63 245.4 340 45.3
MD14G1046200 Malus domestica HOM05D007071 ORTHO05D008677 1.1e-62 244.6 342 47.7
FvH4_6g21190 Fragaria vesca HOM05D007071 ORTHO05D008677 1.9e-62 243.8 334 45.5
Phvul.001G199700 Phaseolus vulgaris HOM05D007071 ORTHO05D008677 1.9e-62 243.8 353 42.8
SGA_v2.0_scaffold31G12809 Striga asiatica HOM05D007071 ORTHO05D008677 1.9e-62 243.8 338 47.0
AT5G06590 Arabidopsis thaliana HOM05D007071 ORTHO05D008677 4.1e-62 242.7 336 43.2
BraA10t45019Z Brassica rapa HOM05D007071 ORTHO05D008677 5.4e-62 242.3 345 43.2
CARHR206610 Cardamine hirsuta HOM05D007071 ORTHO05D008677 5.4e-62 242.3 337 43.9
Sp6g36270 Schrenkiella parvula HOM05D007071 ORTHO05D008677 7.1e-62 241.9 347 44.1
Prupe.7G088000 Prunus persica HOM05D007071 ORTHO05D008677 6.0e-61 238.8 342 45.6
MSTRG.5919 Avicennia marina HOM05D007071 ORTHO05D008677 1.1e-59 234.6 339 45.1
Sopen01g021160 Solanum pennellii HOM05D007071 ORTHO05D008677 1.9e-59 233.8 342 43.3
ATR0697G054 Amborella trichopoda HOM05D007071 ORTHO05D008677 9.5e-59 231.5 377 42.4
Ciclev10012576m.g Citrus clementina HOM05D007071 ORTHO05D008677 1.6e-58 230.7 260 51.9
RcHm_v2.0_Chr3g0477671 Rosa chinensis HOM05D007071 ORTHO05D008677 2.1e-58 230.3 336 44.9
CSS0047921 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 3.6e-58 229.6 254 56.3
Lsat_1_v5_gn_1_56481 Lactuca sativa HOM05D000137 ORTHO05D000503 3.1e-57 226.5 298 48.0
Peaxi162Scf00425g00036 Petunia axillaris HOM05D007071 ORTHO05D008677 2.6e-56 223.4 340 42.9
Peaxi162Scf00645g00018 Petunia axillaris HOM05D007071 ORTHO05D008677 3.4e-56 223.0 340 42.6
TAR633G1119 Trochodendron aralioides HOM05D007071 ORTHO05D008677 3.8e-55 219.5 248 50.8
COL.COLO4_29462 Corchorus olitorius HOM05D007071 ORTHO05D008677 4.9e-55 219.2 284 47.5
Haze_20090 Corylus avellana HOM05D007071 ORTHO05D008677 2.4e-54 216.9 257 49.4
Nitab4.5_0005508g0020 Nicotiana tabacum HOM05D007071 ORTHO05D008677 2.4e-54 216.9 300 45.3
TPR.G14411 Trifolium pratense HOM05D007071 ORTHO05D008677 3.2e-54 216.5 301 45.8
EL10Ac5g11787 Beta vulgaris HOM05D007071 ORTHO05D008677 9.2e-54 214.9 297 45.8
Hund10779 Selenicereus undatus HOM05D007071 ORTHO05D008677 9.2e-54 214.9 343 41.7
Ah.12g059560 Amaranthus hybridus HOM05D007071 ORTHO05D008677 2.7e-53 213.4 338 44.7
Psat3g026600 Pisum sativum HOM05D007071 ORTHO05D008677 2.7e-53 213.4 341 41.9
PGSC0003DMG400031498 Solanum tuberosum HOM05D007071 ORTHO05D008677 2.7e-53 213.4 293 45.4
arahy.Tifrunner.gnm1.ann1.B8MRUG Arachis hypogaea HOM05D007071 ORTHO05D008677 6.0e-53 212.2 334 41.6
arahy.Tifrunner.gnm1.ann1.P13BQJ Arachis hypogaea HOM05D007071 ORTHO05D008677 1.7e-52 210.7 335 42.4
Lalb_Chr25g0287781 Lupinus albus HOM05D007071 ORTHO05D008677 3.9e-52 209.5 339 41.0
Cc06_g07070 Coffea canephora HOM05D007071 ORTHO05D008677 5.1e-52 209.1 330 42.1
FAN09G1879 Fragaria x ananassa HOM05D007071 ORTHO05D008677 8.6e-52 208.4 313 42.2
Migut.J00748 Erythranthe guttata HOM05D007071 ORTHO05D008677 1.9e-51 207.2 335 41.5
FAN14G3447 Fragaria x ananassa HOM05D007071 ORTHO05D008677 1.9e-51 207.2 291 43.6
Oeu028127.1 Olea europaea HOM05D007071 ORTHO05D008677 1.6e-50 204.1 262 46.2
Thhalv10014358m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 1.1e-49 201.4 332 39.8
Thecc.05G182200 Theobroma cacao HOM05D007071 ORTHO05D008677 4.4e-48 196.1 217 49.8
AUR62036298 Chenopodium quinoa HOM05D007071 ORTHO05D008677 1.1e-43 181.4 337 40.9
Peaxi162Scf00414g00006 Petunia axillaris HOM05D007071 ORTHO05D008677 2.5e-43 180.3 334 38.3
Eucgr.A02532 Eucalyptus grandis HOM05D007071 ORTHO05D008677 7.3e-43 178.7 228 46.1
Solyc01g056990.3 Solanum lycopersicum HOM05D007071 ORTHO05D008677 8.1e-42 175.3 289 40.8
AUR62038410 Chenopodium quinoa HOM05D000573 ORTHO05D008677 1.4e-41 174.5 337 39.8
DCAR_020676 Daucus carota HOM05D007071 ORTHO05D008677 2.2e-39 167.2 187 50.8
SEGI_27522 Sequoiadendron giganteum HOM05D007071 ORTHO05D008677 7.1e-38 162.2 383 31.6
CDE10G1223 Ceratophyllum demersum HOM05D007071 ORTHO05D008677 1.8e-36 157.5 185 49.7
Gorai.007G240500 Gossypium raimondii HOM05D007071 ORTHO05D008677 1.3e-31 141.4 190 44.7
SHI31768 Sapria himalayana HOM05D007071 ORTHO05D008677 2.2e-31 140.6 109 64.2
Eucgr.C00285 Eucalyptus grandis HOM05D007071 ORTHO05D008677 3.2e-30 136.7 92 70.7
Gohir.A07G089166 Gossypium hirsutum HOM05D007071 ORTHO05D008677 8.1e-26 122.1 85 68.2
Gohir.A06G128402 Gossypium hirsutum HOM05D007071 ORTHO05D008677 5.8e-24 115.9 171 43.9
Zm00001eb134480 Zea mays HOM05D007071 ORTHO05D008677 8.4e-23 112.1 267 33.3
Gohir.A07G056200 Gossypium hirsutum HOM05D007071 ORTHO05D008677 1.0e-20 105.1 118 50.8
MD12G1047800 Malus domestica HOM05D007071 ORTHO05D008677 1.6e-18 97.8 100 57.0
AagrBONN_evm.TU.Sc2ySwM_117.1490 Anthoceros agrestis HOM05D007071 ORTHO05D008677 4.8e-18 96.3 348 26.4
Actinidia26606 Actinidia chinensis HOM05D002116 ORTHO05D002438 5.9e-16 89.4 132 44.7
Eucgr.A02531 Eucalyptus grandis HOM05D007071 ORTHO05D008677 8.5e-15 85.5 88 59.1
SMO165G0174 Selaginella moellendorffii HOM05D007071 ORTHO05D008677 4.2e-14 83.2 341 25.2
TPR.G40805 Trifolium pratense HOM05D007071 ORTHO05D008677 2.3e-12 77.4 79 57.0
CSS0001330 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 3.0e-12 77.0 72 61.1
Pp3c26_10880 Physcomitrium patens HOM05D007071 ORTHO05D008677 5.1e-12 76.3 411 21.9
QL02p030777 Quercus lobata HOM05D007071 ORTHO05D008677 1.1e-11 75.1 47 74.5
CiPaw.16G104200 Carya illinoinensis HOM05D007071 ORTHO05D008677 3.3e-11 73.6 66 59.1
Actinidia03957 Actinidia chinensis HOM05D002116 ORTHO05D002438 4.3e-11 73.2 41 87.8
Pp3c4_24350 Physcomitrium patens HOM05D007071 ORTHO05D008677 1.6e-10 71.2 410 22.9
MD12G1047700 Malus domestica HOM05D007071 ORTHO05D008677 2.2e-10 70.9 45 71.1
Mapoly0045s0075 Marchantia polymorpha HOM05D007071 ORTHO05D008677 1.2e-08 65.1 108 34.3
PGSC0003DMG400019076 Solanum tuberosum HOM05D007071 ORTHO05D008677 2.6e-08 63.9 72 50.0
Os12g0623400 Oryza sativa ssp. japonica HOM05D007071 ORTHO05D008677 2.9e-07 60.5 79 43.0


User provided reference genes

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