Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07494 Vaccinium macrocarpon HOM05D006703 ORTHO05D008389 7.7e-158 560.5 286 100.0
Rhsim03G0062400 Rhododendron simsii HOM05D006703 ORTHO05D008389 5.3e-74 282.0 314 56.4
Actinidia37767 Actinidia chinensis HOM05D006703 ORTHO05D008389 3.2e-63 246.1 289 50.9
Hma1.2p1_0401F.1_g144790 Hydrangea macrophylla HOM05D006703 ORTHO05D008389 1.9e-55 220.3 289 49.5
GSVIVG01022605001 Vitis vinifera HOM05D006703 ORTHO05D008389 1.0e-48 198.0 287 43.9
Oeu020165.3 Olea europaea HOM05D006703 ORTHO05D008389 5.0e-48 195.7 292 44.9
Lj1A1058G53 Lonicera japonica HOM05D006703 ORTHO05D008389 8.5e-48 194.9 294 44.9
TAR636G3193 Trochodendron aralioides HOM05D004977 ORTHO05D006454 1.4e-47 194.1 281 43.1
Nitab4.5_0001918g0020 Nicotiana tabacum HOM05D006703 ORTHO05D008389 2.5e-47 193.4 294 42.5
Nitab4.5_0000721g0180 Nicotiana tabacum HOM05D006703 ORTHO05D008389 4.2e-47 192.6 294 42.2
RcHm_v2.0_Chr3g0477081 Rosa chinensis HOM05D006703 ORTHO05D008389 1.0e-45 188.0 288 42.0
MELO3C009564.2 Cucumis melo HOM05D006703 ORTHO05D008389 1.4e-45 187.6 288 42.0
Actinidia03862 Actinidia chinensis HOM05D006703 ORTHO05D008389 3.0e-45 186.4 126 77.8
ClCG10G018080 Citrullus lanatus HOM05D006703 ORTHO05D008389 2.6e-44 183.3 287 41.8
HanXRQChr02g0052921 Helianthus annuus HOM05D006703 ORTHO05D008389 3.3e-44 183.0 287 41.8
Lalb_Chr01g0017771 Lupinus albus HOM05D006703 ORTHO05D008389 3.3e-44 183.0 286 40.9
HanXRQChr13g0398671 Helianthus annuus HOM05D006703 ORTHO05D008389 7.4e-44 181.8 299 41.1
Eucgr.K01914 Eucalyptus grandis HOM05D006703 ORTHO05D008389 2.2e-43 180.3 294 41.2
Ah.12g059450 Amaranthus hybridus HOM05D001890 ORTHO05D003442 2.8e-43 179.9 293 41.3
FAN05G3633 Fragaria x ananassa HOM05D006703 ORTHO05D008389 4.8e-43 179.1 288 41.0
ECA233G5710 Erigeron canadensis HOM05D006703 ORTHO05D008389 8.2e-43 178.3 303 41.9
FAN05G2374 Fragaria x ananassa HOM05D006703 ORTHO05D008389 1.4e-42 177.6 288 40.6
Hund14986 Selenicereus undatus HOM05D006703 ORTHO05D008389 1.8e-42 177.2 288 39.2
DCAR_013453 Daucus carota HOM05D006703 ORTHO05D008389 2.4e-42 176.8 286 38.5
Sed0006927 Sechium edule HOM05D006703 ORTHO05D008389 2.4e-42 176.8 287 41.5
CsaV3_3G038210 Cucumis sativus L. HOM05D006703 ORTHO05D008389 3.1e-42 176.4 288 39.9
FAN09G4763 Fragaria x ananassa HOM05D006703 ORTHO05D008389 3.1e-42 176.4 291 40.5
Gorai.002G233800 Gossypium raimondii HOM05D006703 ORTHO05D008389 3.1e-42 176.4 286 39.2
Gohir.D01G190000 Gossypium hirsutum HOM05D006703 ORTHO05D008389 4.1e-42 176.0 286 39.2
MD14G1043200 Malus domestica HOM05D006703 ORTHO05D008389 6.9e-42 175.3 287 40.4
Gohir.A01G200000 Gossypium hirsutum HOM05D006703 ORTHO05D008389 9.1e-42 174.9 286 39.2
TWI74G0187 Tripterygium wilfordii HOM05D006703 ORTHO05D008389 9.1e-42 174.9 304 38.2
MD12G1044300 Malus domestica HOM05D006703 ORTHO05D008389 1.2e-41 174.5 287 39.4
Prupe.7G090900 Prunus persica HOM05D006703 ORTHO05D008389 1.2e-41 174.5 290 42.1
EL10Ac5g11822 Beta vulgaris HOM05D006703 ORTHO05D008389 1.5e-41 174.1 290 40.7
Potri.016G066800 Populus trichocarpa HOM05D006703 ORTHO05D008389 2.0e-41 173.7 287 39.4
QL07p026854 Quercus lobata HOM05D006703 ORTHO05D008389 2.0e-41 173.7 296 39.9
Thecc.05G108700 Theobroma cacao HOM05D006703 ORTHO05D008389 2.6e-41 173.3 286 38.8
RcHm_v2.0_Chr3g0477171 Rosa chinensis HOM05D006703 ORTHO05D008389 4.5e-41 172.6 287 41.1
AUR62030691 Chenopodium quinoa HOM05D006703 ORTHO05D008389 5.9e-41 172.2 291 39.2
Duzib106G1644 Durio zibethinus HOM05D006703 ORTHO05D008389 5.9e-41 172.2 286 40.2
TPR.G34442 Trifolium pratense HOM05D006703 ORTHO05D008389 7.7e-41 171.8 296 39.5
MSTRG.19329 Avicennia marina HOM05D006703 ORTHO05D008389 1.0e-40 171.4 292 39.0
Cc06_g06870 Coffea canephora HOM05D006703 ORTHO05D008389 1.0e-40 171.4 293 43.0
Nn2g14390 Nelumbo nucifera HOM05D006703 ORTHO05D008389 1.3e-40 171.0 287 39.0
Sabra16G0068200 Salix brachista HOM05D006703 ORTHO05D008389 1.3e-40 171.0 286 38.5
FvH4_6g20830 Fragaria vesca HOM05D006703 ORTHO05D008389 1.7e-40 170.6 291 39.9
FAN14G3264 Fragaria x ananassa HOM05D006703 ORTHO05D008389 1.7e-40 170.6 291 39.9
CiPaw.09G023100 Carya illinoinensis HOM05D006703 ORTHO05D008389 2.2e-40 170.2 286 37.4
Dinv25069 Davidia involucrata HOM05D001890 ORTHO05D003442 2.9e-40 169.9 131 70.2
Ca_09072_v3 Cicer arietinum L. HOM05D006703 ORTHO05D008389 5.0e-40 169.1 291 39.5
EL10Ac9g21006 Beta vulgaris HOM05D006703 ORTHO05D008389 8.5e-40 168.3 290 40.0
Lj1g0009334 Lotus japonicus HOM05D006703 ORTHO05D008389 8.5e-40 168.3 293 39.2
Hund10833 Selenicereus undatus HOM05D006703 ORTHO05D008389 1.4e-39 167.5 288 38.9
MSTRG.26583 Avicennia marina HOM05D006703 ORTHO05D008389 3.2e-39 166.4 286 41.6
Duzib093G0046 Durio zibethinus HOM05D006703 ORTHO05D008389 4.2e-39 166.0 285 38.9
CiPaw.10G019700 Carya illinoinensis HOM05D006703 ORTHO05D008389 9.4e-39 164.9 286 37.1
Cfa020082 Carpinus fangiana HOM05D006703 ORTHO05D008389 1.6e-38 164.1 286 38.5
COL.COLO4_29515 Corchorus olitorius HOM05D006703 ORTHO05D008389 2.7e-38 163.3 288 39.6
Medtr7g106660 Medicago truncatula HOM05D006703 ORTHO05D008389 3.6e-38 162.9 291 39.2
PGSC0003DMG400028230 Solanum tuberosum HOM05D006703 ORTHO05D008389 6.1e-38 162.2 294 37.8
Sopen10g032260 Solanum pennellii HOM05D006703 ORTHO05D008389 7.9e-38 161.8 294 37.8
AUR62036335 Chenopodium quinoa HOM05D006703 ORTHO05D008389 1.0e-37 161.4 247 41.3
Solyc10g081750.1 Solanum lycopersicum HOM05D006703 ORTHO05D008389 1.4e-37 161.0 294 37.4
Sed0010784 Sechium edule HOM05D006703 ORTHO05D008389 3.0e-37 159.8 292 38.0
Manes.08G036200 Manihot esculenta HOM05D006703 ORTHO05D008389 5.2e-37 159.1 291 36.4
PGR004G0398 Punica granatum HOM05D006703 ORTHO05D008389 6.7e-37 158.7 287 38.7
Peaxi162Scf00203g00910 Petunia axillaris HOM05D006703 ORTHO05D008389 8.8e-37 158.3 285 39.6
TWI77G0507 Tripterygium wilfordii HOM05D006703 ORTHO05D008389 8.8e-37 158.3 293 36.2
Phvul.001G197500 Phaseolus vulgaris HOM05D006703 ORTHO05D008389 2.6e-36 156.8 288 38.9
FAN02G3199 Fragaria x ananassa HOM05D006703 ORTHO05D008389 5.7e-36 155.6 252 40.5
arahy.Tifrunner.gnm1.ann1.8DDT0E Arachis hypogaea HOM05D006703 ORTHO05D008389 2.2e-35 153.7 300 36.7
arahy.Tifrunner.gnm1.ann1.W58RTV Arachis hypogaea HOM05D006703 ORTHO05D008389 2.2e-35 153.7 300 36.7
Haze_20110 Corylus avellana HOM05D006703 ORTHO05D008389 2.2e-35 153.7 286 36.0
SGA_v2.0_scaffold31G12818 Striga asiatica HOM05D006703 ORTHO05D008389 2.8e-35 153.3 287 38.3
VMungo1383G2242 Vigna mungo HOM05D001890 ORTHO05D003442 2.8e-35 153.3 288 38.2
Sc22g0003150 Simmondsia chinensis HOM05D006703 ORTHO05D008389 1.4e-34 151.0 298 37.6
Atru.chr8.1299 Acer truncatum HOM05D006703 ORTHO05D008389 7.0e-34 148.7 260 36.5
Glyma.03G204000 Glycine max HOM05D006703 ORTHO05D008389 7.0e-34 148.7 288 36.1
CANSAT64G1940 Cannabis sativa HOM05D006703 ORTHO05D008389 9.1e-34 148.3 289 35.6
SGA_v2.0_scaffold392G50677 Striga asiatica HOM05D006703 ORTHO05D008389 1.2e-33 147.9 286 37.1
Migut.J00741 Erythranthe guttata HOM05D006703 ORTHO05D008389 3.5e-33 146.4 297 36.4
PSO017G1234 Papaver somniferum HOM05D006703 ORTHO05D008389 2.9e-32 143.3 294 35.0
Manes.09G042800 Manihot esculenta HOM05D006703 ORTHO05D008389 3.8e-32 142.9 287 35.2
Actinidia03970 Actinidia chinensis HOM05D006703 ORTHO05D008389 1.1e-31 141.4 280 39.3
Psat3g028120 Pisum sativum HOM05D006703 ORTHO05D008389 3.2e-31 139.8 290 35.2
MBI05_g29094_MAGBIO Magnolia biondii HOM05D006703 ORTHO05D008389 4.2e-31 139.4 299 34.4
Aa31LG5G21040 Aethionema arabicum HOM05D006703 ORTHO05D008389 4.7e-30 136.0 290 33.4
BolC4t27966H Brassica oleracea HOM05D006703 ORTHO05D008389 1.2e-28 131.3 296 32.8
BraA04t18236Z Brassica rapa HOM05D006703 ORTHO05D008389 1.5e-28 131.0 296 32.8
BcaC02g07656 Brassica carinata HOM05D006703 ORTHO05D008389 3.3e-28 129.8 296 32.4
A04p27380 Brassica napus HOM05D006703 ORTHO05D008389 5.7e-28 129.0 296 32.8
Thhalv10017281m.g Eutrema salsugineum HOM05D006703 ORTHO05D008389 7.5e-28 128.6 292 32.5
ATR0697G151 Amborella trichopoda HOM05D006703 ORTHO05D008389 9.7e-28 128.3 287 33.1
C04p64910 Brassica napus HOM05D006703 ORTHO05D008389 1.7e-27 127.5 296 32.1
CARHR130150 Cardamine hirsuta HOM05D006703 ORTHO05D008389 2.2e-27 127.1 287 32.1
Carub.0004s1765 Capsella rubella HOM05D006703 ORTHO05D008389 8.2e-27 125.2 294 31.6
BcaB06g28891 Brassica carinata HOM05D006703 ORTHO05D008389 1.8e-26 124.0 294 32.7
AT2G35900 Arabidopsis thaliana HOM05D006703 ORTHO05D008389 3.1e-26 123.2 292 31.2
AL4G32000 Arabidopsis lyrata HOM05D006703 ORTHO05D008389 5.3e-26 122.5 292 31.2
Aqoxy1G00585 Aquilegia oxysepala HOM05D006703 ORTHO05D008389 7.0e-26 122.1 299 33.4
BraA03t11234Z Brassica rapa HOM05D006703 ORTHO05D008389 1.6e-25 120.9 288 30.9
A03p19820 Brassica napus HOM05D006703 ORTHO05D008389 2.0e-25 120.6 289 31.8
C03p23140 Brassica napus HOM05D006703 ORTHO05D008389 2.0e-25 120.6 289 31.8
Os01g0771200 Oryza sativa ssp. japonica HOM05D006703 ORTHO05D008389 2.0e-25 120.6 291 30.9
Sp4g18150 Schrenkiella parvula HOM05D006703 ORTHO05D008389 7.7e-25 118.6 292 31.5
THA.LOC104823512 Tarenaya hassleriana HOM05D006703 ORTHO05D008389 1.0e-24 118.2 291 30.9
CDE10G0766 Ceratophyllum demersum HOM05D006703 ORTHO05D008389 8.5e-24 115.2 225 32.9
Zm00001eb151930 Zea mays HOM05D006703 ORTHO05D008389 8.5e-24 115.2 286 31.8
BcaC01g05692 Brassica carinata HOM05D006703 ORTHO05D008389 3.2e-23 113.2 289 31.5
BolC3t14715H Brassica oleracea HOM05D006703 ORTHO05D008389 3.2e-23 113.2 289 31.5
unitig_749.g14212 Utricularia gibba HOM05D006703 ORTHO05D008389 2.8e-19 100.1 244 31.6
Dinv16712 Davidia involucrata HOM05D006703 ORTHO05D008389 1.4e-18 97.8 68 72.1
Glyma.19G201366 Glycine max HOM05D006703 ORTHO05D008389 4.7e-14 82.8 124 43.5
CDE10G0313 Ceratophyllum demersum HOM05D006703 ORTHO05D001378 4.0e-13 79.7 137 37.2
Oeu045018.1 Olea europaea HOM05D006703 ORTHO05D008389 5.7e-12 75.9 69 55.1
SHI28311 Sapria himalayana HOM05D006703 ORTHO05D008389 7.5e-12 75.5 139 36.7
SEGI_14783 Sequoiadendron giganteum HOM05D000064 ORTHO05D008389 2.4e-10 70.5 72 47.2
SEGI_41401 Sequoiadendron giganteum HOM05D006703 ORTHO05D008389 1.0e-08 65.1 77 42.9
Sc17g0001990 Simmondsia chinensis HOM05D006703 ORTHO05D008389 4.3e-07 59.7 56 57.1


User provided reference genes

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