Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 7.7e-109 397.1 196 100.0
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 7.3e-83 310.8 198 81.3
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 8.6e-68 260.8 198 71.7
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 8.6e-68 260.8 198 71.7
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 4.3e-67 258.5 199 70.4
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 1.3e-63 246.9 200 65.0
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 4.6e-61 238.4 199 65.8
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 4.6e-61 238.4 200 63.5
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 1.3e-60 236.9 205 64.4
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 1.1e-59 233.8 199 66.3
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 2.5e-59 232.6 201 63.7
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 4.3e-59 231.9 201 63.2
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 1.2e-58 230.3 188 62.8
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 4.7e-58 228.4 201 63.2
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 1.4e-57 226.9 203 62.6
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 1.8e-57 226.5 173 65.9
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 1.8e-57 226.5 201 62.2
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 1.8e-57 226.5 126 83.3
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 8.9e-57 224.2 195 63.1
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 1.5e-56 223.4 197 61.9
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 1.5e-56 223.4 127 82.7
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 2.0e-56 223.0 195 60.0
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 2.0e-56 223.0 129 81.4
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 2.0e-56 223.0 196 63.8
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 5.8e-56 221.5 151 72.8
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 9.9e-56 220.7 191 63.4
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 1.3e-55 220.3 196 58.7
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 2.2e-55 219.5 147 73.5
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 3.8e-55 218.8 128 82.0
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 4.9e-55 218.4 137 78.1
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 6.4e-55 218.0 144 74.3
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 1.1e-54 217.2 171 67.3
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 1.4e-54 216.9 197 61.9
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 1.2e-53 213.8 194 58.2
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 2.1e-53 213.0 200 60.5
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 4.6e-53 211.8 197 60.9
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 7.8e-53 211.1 177 64.4
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 1.0e-52 210.7 203 59.1
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 3.0e-52 209.1 202 56.4
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 3.0e-52 209.1 196 57.7
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 8.7e-52 207.6 114 86.8
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 1.9e-51 206.5 147 70.7
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 3.3e-51 205.7 140 70.0
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 4.3e-51 205.3 196 57.1
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 4.3e-51 205.3 139 71.9
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 1.2e-50 203.8 204 55.9
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 2.8e-50 202.6 198 57.1
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 2.8e-50 202.6 198 57.1
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 4.7e-50 201.8 195 56.9
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 4.7e-50 201.8 170 61.2
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 1.4e-49 200.3 199 59.3
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 1.8e-49 199.9 160 63.1
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 2.4e-49 199.5 198 55.6
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 6.9e-49 198.0 191 57.1
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 6.9e-49 198.0 139 71.2
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 1.5e-48 196.8 197 54.8
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 1.5e-48 196.8 180 60.0
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 3.4e-48 195.7 114 82.5
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 7.6e-48 194.5 203 54.7
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 7.6e-48 194.5 204 55.9
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 1.3e-47 193.7 196 54.6
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 1.7e-47 193.4 197 54.3
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 3.8e-47 192.2 144 68.8
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 1.9e-46 189.9 198 54.5
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 4.2e-46 188.7 201 54.2
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 5.4e-46 188.3 136 66.2
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 7.1e-46 188.0 130 71.5
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 1.2e-45 187.2 175 62.3
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 6.0e-45 184.9 140 67.9
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 1.3e-44 183.7 126 70.6
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 1.3e-44 183.7 126 70.6
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 3.0e-44 182.6 130 70.0
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 3.0e-44 182.6 164 58.5
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 3.9e-44 182.2 125 70.4
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 3.9e-44 182.2 125 72.0
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 3.9e-44 182.2 125 72.0
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 3.9e-44 182.2 126 70.6
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 8.7e-44 181.0 131 71.0
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 1.5e-43 180.3 146 65.1
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 9.6e-43 177.6 122 70.5
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 1.6e-42 176.8 203 51.2
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 2.8e-42 176.0 198 53.0
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 4.8e-42 175.3 148 62.8
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 1.1e-41 174.1 137 65.7
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 1.4e-41 173.7 140 65.0
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 1.8e-41 173.3 139 66.9
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 3.4e-40 169.1 121 70.2
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 4.5e-40 168.7 184 53.3
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 4.5e-40 168.7 184 53.3
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 9.9e-40 167.5 132 66.7
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 3.8e-39 165.6 162 56.8
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 3.7e-34 149.1 205 47.3
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 3.8e-31 139.0 119 57.1
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 1.4e-30 137.1 130 52.3
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 5.5e-30 135.2 131 54.2
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 2.3e-28 129.8 385 29.6
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 3.9e-28 129.0 129 51.9
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 1.1e-27 127.5 82 70.7
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 2.8e-26 122.9 82 69.5
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 1.0e-23 114.4 75 72.0
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 2.9e-23 112.8 75 70.7
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 3.0e-20 102.8 80 62.5
Actinidia05405 Actinidia chinensis HOM05D005132 ORTHO05D005823 1.9e-14 83.6 53 77.4
TAR369G0436 Trochodendron aralioides HOM05D007282 ORTHO05D009214 2.4e-09 66.6 52 65.4
Ciclev10013843m.g Citrus clementina HOM05D007282 ORTHO05D009214 3.4e-08 62.8 103 40.8
MD14G1029800 Malus domestica HOM05D007282 ORTHO05D009214 7.7e-08 61.6 103 37.9
MD12G1029500 Malus domestica HOM05D007282 ORTHO05D009214 3.8e-07 59.3 54 53.7
PRCOL_00001877 Prasinoderma coloniale HOM05D007282 ORTHO05D009214 8.5e-07 58.2 126 34.1
Glyma.02G201900 Glycine max HOM05D007282 ORTHO05D009214 3.2e-06 56.2 99 38.4


User provided reference genes

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