Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07373 Vaccinium macrocarpon HOM05D000976 ORTHO05D426427 1.8e-78 295.8 146 100.0
vmacro06664 Vaccinium macrocarpon HOM05D000976 ORTHO05D427086 6.7e-49 197.6 130 80.0
Rhsim06G0148300 Rhododendron simsii HOM05D000976 ORTHO05D000847 3.3e-08 62.4 37 75.7
RhsimUnG0240500 Rhododendron simsii HOM05D000976 ORTHO05D000847 3.3e-08 62.4 37 75.7
vmacro22789 Vaccinium macrocarpon HOM05D000976 ORTHO05D426930 3.3e-08 62.4 37 78.4
COL.COLO4_35392 Corchorus olitorius HOM05D000976 ORTHO05D000847 4.4e-08 62.0 53 62.3
Thecc.02G176400 Theobroma cacao HOM05D000976 ORTHO05D000847 4.4e-08 62.0 53 60.4
Actinidia09872 Actinidia chinensis HOM05D000976 ORTHO05D000847 5.7e-08 61.6 32 84.4
Dinv23681 Davidia involucrata HOM05D000976 ORTHO05D000847 7.5e-08 61.2 30 86.7
FAN05G2227 Fragaria x ananassa HOM05D000976 ORTHO05D000847 7.5e-08 61.2 57 56.1
FAN14G5640 Fragaria x ananassa HOM05D000976 ORTHO05D000847 1.3e-07 60.5 34 79.4
Gohir.A12G137800 Gossypium hirsutum HOM05D000976 ORTHO05D000847 1.3e-07 60.5 44 65.9
Gohir.D12G141800 Gossypium hirsutum HOM05D000976 ORTHO05D000847 1.3e-07 60.5 44 65.9
Gorai.008G153300 Gossypium raimondii HOM05D000976 ORTHO05D000847 1.3e-07 60.5 44 65.9
Ciclev10016313m.g Citrus clementina HOM05D000976 ORTHO05D000847 2.2e-07 59.7 40 67.5
FAN02G4121 Fragaria x ananassa HOM05D000976 ORTHO05D003257 2.2e-07 59.7 101 41.6
Gohir.A01G016100 Gossypium hirsutum HOM05D000976 ORTHO05D000847 2.2e-07 59.7 45 62.2
Gorai.002G017800 Gossypium raimondii HOM05D000976 ORTHO05D000847 2.2e-07 59.7 45 62.2
Hma1.2p1_0875F.1_g231380 Hydrangea macrophylla HOM05D000976 ORTHO05D000847 2.2e-07 59.7 46 63.0
CSS0030783 Camellia sinensis var. sinensis HOM05D000976 ORTHO05D000847 2.8e-07 59.3 37 73.0
FvH4_6g45080 Fragaria vesca HOM05D000976 ORTHO05D000847 2.8e-07 59.3 101 41.6
FAN09G1442 Fragaria x ananassa HOM05D000976 ORTHO05D000847 2.8e-07 59.3 101 40.6
Cpa.g.sc700.3 Carica papaya HOM05D000976 ORTHO05D000847 3.7e-07 58.9 78 43.6
Haze_13130 Corylus avellana HOM05D000976 ORTHO05D000847 3.7e-07 58.9 46 60.9
TAR624G0134 Trochodendron aralioides HOM05D000976 ORTHO05D000847 3.7e-07 58.9 30 83.3
TAR624G0316 Trochodendron aralioides HOM05D000976 ORTHO05D000847 3.7e-07 58.9 30 83.3
GSVIVG01030544001 Vitis vinifera HOM05D000976 ORTHO05D000847 3.7e-07 58.9 30 83.3
Duzib248G1571 Durio zibethinus HOM05D000976 ORTHO05D000847 4.8e-07 58.5 44 65.9
Nn1g06657 Nelumbo nucifera HOM05D000976 ORTHO05D000847 4.8e-07 58.5 30 83.3
CiPaw.03G174000 Carya illinoinensis HOM05D000976 ORTHO05D000847 6.3e-07 58.2 53 50.9
Dinv12908 Davidia involucrata HOM05D000976 ORTHO05D000847 6.3e-07 58.2 46 63.0
Duzib052G1142 Durio zibethinus HOM05D000976 ORTHO05D000847 6.3e-07 58.2 30 83.3
PSO541G1052 Papaver somniferum HOM05D000976 ORTHO05D000847 6.3e-07 58.2 30 80.0
PSO675G0279 Papaver somniferum HOM05D000976 ORTHO05D000847 6.3e-07 58.2 30 80.0
Sabra13G0115400 Salix brachista HOM05D000976 ORTHO05D000847 6.3e-07 58.2 37 70.3
Actinidia11065 Actinidia chinensis HOM05D000976 ORTHO05D000847 8.2e-07 57.8 32 78.1
Oeu041275.4 Olea europaea HOM05D000976 ORTHO05D000847 8.2e-07 57.8 38 76.3
Glyma.12G109700 Glycine max HOM05D000976 ORTHO05D000847 1.1e-06 57.4 81 42.0
Gohir.D01G016100 Gossypium hirsutum HOM05D000976 ORTHO05D000847 1.1e-06 57.4 45 60.0
MD17G1079100 Malus domestica HOM05D000976 ORTHO05D000847 1.1e-06 57.4 30 86.7
CANSAT64G1659 Cannabis sativa HOM05D000976 ORTHO05D000847 1.4e-06 57.0 52 53.8
MBI02_g23396_MAGBIO Magnolia biondii HOM05D000976 ORTHO05D000847 1.4e-06 57.0 30 80.0
QL08p038101 Quercus lobata HOM05D000976 ORTHO05D000847 1.4e-06 57.0 30 80.0
Aqoxy1G02604 Aquilegia oxysepala HOM05D000976 ORTHO05D000847 1.8e-06 56.6 30 80.0
CDE12G0058 Ceratophyllum demersum HOM05D000976 ORTHO05D000847 1.8e-06 56.6 66 48.5
Duzib132G0459 Durio zibethinus HOM05D000976 ORTHO05D000847 1.8e-06 56.6 30 80.0
Prupe.3G235700 Prunus persica HOM05D000976 ORTHO05D000847 1.8e-06 56.6 30 83.3
TWI75G0528 Tripterygium wilfordii HOM05D000976 ORTHO05D000847 1.8e-06 56.6 30 80.0
Atru.chr6.3018 Acer truncatum HOM05D000976 ORTHO05D000847 2.4e-06 56.2 30 83.3
Cfa014579 Carpinus fangiana HOM05D000976 ORTHO05D000847 2.4e-06 56.2 78 42.3
Potri.013G136200 Populus trichocarpa HOM05D000976 ORTHO05D000847 2.4e-06 56.2 30 80.0
SHI10440 Sapria himalayana HOM05D000105 ORTHO05D000023 2.4e-06 56.2 30 80.0
SEGI_26773 Sequoiadendron giganteum HOM05D000976 ORTHO05D000847 2.4e-06 56.2 37 73.0
Sc12g0002890 Simmondsia chinensis HOM05D000976 ORTHO05D000847 2.4e-06 56.2 30 80.0
TAR627G0233 Trochodendron aralioides HOM05D000976 ORTHO05D000847 2.4e-06 56.2 30 80.0
arahy.Tifrunner.gnm1.ann1.DIK43V Arachis hypogaea HOM05D000976 ORTHO05D000847 3.1e-06 55.8 30 76.7
arahy.Tifrunner.gnm1.ann1.MA8DWW Arachis hypogaea HOM05D000976 ORTHO05D000847 3.1e-06 55.8 30 76.7
BcaB02g06913 Brassica carinata HOM05D000976 ORTHO05D000847 3.1e-06 55.8 30 76.7
CiPaw.04G124300 Carya illinoinensis HOM05D000976 ORTHO05D000847 3.1e-06 55.8 81 39.5
ClCG02G017490 Citrullus lanatus HOM05D000976 ORTHO05D000847 3.1e-06 55.8 30 73.3
Manes.13G148900 Manihot esculenta HOM05D000976 ORTHO05D000847 3.1e-06 55.8 30 83.3
TAR624G0579 Trochodendron aralioides HOM05D000976 ORTHO05D000847 3.1e-06 55.8 30 80.0
CAN.G1655.9 Capsicum annuum HOM05D000976 ORTHO05D000847 4.1e-06 55.5 37 70.3
Nn1g03992 Nelumbo nucifera HOM05D000976 ORTHO05D000847 4.1e-06 55.5 30 80.0
RcHm_v2.0_Chr2g0162481 Rosa chinensis HOM05D000976 ORTHO05D000847 4.1e-06 55.5 77 44.2
SGA_v2.0_scaffold109G31100 Striga asiatica HOM05D000976 ORTHO05D000847 4.1e-06 55.5 30 80.0
VMungo1127G1379 Vigna mungo HOM05D000976 ORTHO05D000847 4.1e-06 55.5 30 76.7
Lalb_Chr03g0029281 Lupinus albus HOM05D000976 ORTHO05D000847 5.3e-06 55.1 30 76.7
Medtr0258s0040 Medicago truncatula HOM05D000976 ORTHO05D000847 5.3e-06 55.1 81 42.0
SalBow1G5803 Salvia bowleyana HOM05D000976 ORTHO05D000847 5.3e-06 55.1 81 42.0
THA.LOC104801179 Tarenaya hassleriana HOM05D000976 ORTHO05D000847 5.3e-06 55.1 78 42.3
Lalb_Chr19g0135341 Lupinus albus HOM05D000976 ORTHO05D000847 7.0e-06 54.7 100 38.0
Phvul.011G113500 Phaseolus vulgaris HOM05D000976 ORTHO05D000847 7.0e-06 54.7 81 39.5
Ah.01g014400 Amaranthus hybridus HOM05D000976 ORTHO05D000847 9.1e-06 54.3 30 76.7
CiPaw.14G019700 Carya illinoinensis HOM05D000976 ORTHO05D000847 9.1e-06 54.3 30 80.0
Migut.H01058 Erythranthe guttata HOM05D000976 ORTHO05D000847 9.1e-06 54.3 37 67.6
Thhalv10008491m.g Eutrema salsugineum HOM05D000976 ORTHO05D000847 9.1e-06 54.3 30 73.3
Glyma.06G296000 Glycine max HOM05D000976 ORTHO05D000847 9.1e-06 54.3 81 40.7


User provided reference genes

Program Settings