Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07301 Vaccinium macrocarpon HOM05D004402 ORTHO05D005314 0.0e+00 1214.9 601 100.0
vmacro01673 Vaccinium macrocarpon HOM05D004402 ORTHO05D005314 5.2e-281 970.7 604 82.6
Rhsim03G0090600 Rhododendron simsii HOM05D004402 ORTHO05D005314 1.1e-251 873.2 798 62.0
CSS0044786 Camellia sinensis var. sinensis HOM05D004402 ORTHO05D005314 4.0e-241 838.2 601 72.0
Dinv35795 Davidia involucrata HOM05D004402 ORTHO05D005314 1.9e-238 829.3 601 70.5
Duzib093G2129 Durio zibethinus HOM05D004402 ORTHO05D005314 1.4e-222 776.5 601 67.4
GSVIVG01033653001 Vitis vinifera HOM05D004402 ORTHO05D005314 4.2e-222 775.0 602 66.6
Cfa017631 Carpinus fangiana HOM05D004402 ORTHO05D005314 3.9e-220 768.5 601 66.6
QL07p043056 Quercus lobata HOM05D004402 ORTHO05D005314 7.4e-219 764.2 600 66.5
Thecc.05G068900 Theobroma cacao HOM05D004402 ORTHO05D005314 1.8e-217 759.6 601 65.9
Atru.chr8.1786 Acer truncatum HOM05D004402 ORTHO05D005314 1.2e-216 756.9 598 65.9
Ciclev10011527m.g Citrus clementina HOM05D004402 ORTHO05D005314 1.2e-216 756.9 599 65.6
Potri.006G123000 Populus trichocarpa HOM05D004402 ORTHO05D005314 2.6e-216 755.7 601 66.1
Sabra06G0097300 Salix brachista HOM05D004402 ORTHO05D005314 4.5e-216 755.0 601 65.7
COL.COLO4_09330 Corchorus olitorius HOM05D004402 ORTHO05D005314 6.4e-215 751.1 598 66.2
RcHm_v2.0_Chr3g0470441 Rosa chinensis HOM05D004402 ORTHO05D005314 8.4e-215 750.7 600 65.8
Prupe.7G128300 Prunus persica HOM05D004402 ORTHO05D005314 3.2e-214 748.8 600 65.7
TAR633G1938 Trochodendron aralioides HOM05D004402 ORTHO05D005314 5.5e-214 748.0 600 64.7
Oeu041487.1 Olea europaea HOM05D004402 ORTHO05D005314 7.1e-214 747.7 601 65.7
Nn6g35264 Nelumbo nucifera HOM05D004402 ORTHO05D005314 2.7e-213 745.7 600 64.7
Gorai.009G414300 Gossypium raimondii HOM05D004402 ORTHO05D005314 7.9e-213 744.2 601 64.7
FvH4_6g16530 Fragaria vesca HOM05D004402 ORTHO05D005314 1.3e-212 743.4 600 65.2
CiPaw.10G128900 Carya illinoinensis HOM05D004402 ORTHO05D005314 5.1e-212 741.5 600 64.8
Cc06_g04350 Coffea canephora HOM05D004402 ORTHO05D005314 6.7e-212 741.1 601 63.1
Gohir.D04G110200 Gossypium hirsutum HOM05D004402 ORTHO05D005314 6.7e-212 741.1 601 64.6
Lj2C120T4 Lonicera japonica HOM05D004402 ORTHO05D005314 1.9e-211 739.6 561 68.8
CANSAT80G1177 Cannabis sativa HOM05D004402 ORTHO05D005314 4.3e-211 738.4 600 64.3
Glyma.03G184200 Glycine max HOM05D004402 ORTHO05D005314 7.4e-211 737.6 598 63.9
Phvul.001G179700 Phaseolus vulgaris HOM05D004402 ORTHO05D005314 2.1e-210 736.1 601 63.2
Sopen09g003130 Solanum pennellii HOM05D004402 ORTHO05D005314 2.1e-210 736.1 601 64.1
Glyma.19G184800 Glycine max HOM05D004402 ORTHO05D005314 2.8e-210 735.7 601 63.9
TAR636G0918 Trochodendron aralioides HOM05D004402 ORTHO05D005314 2.8e-210 735.7 582 65.8
Lj1g0000599 Lotus japonicus HOM05D004402 ORTHO05D005314 1.8e-209 733.0 601 62.7
COL.COLO4_26944 Corchorus olitorius HOM05D004402 ORTHO05D005314 4.0e-209 731.9 511 72.2
Nitab4.5_0000578g0080 Nicotiana tabacum HOM05D004402 ORTHO05D005314 5.3e-209 731.5 601 62.9
Solyc09g008310.3 Solanum lycopersicum HOM05D004402 ORTHO05D005314 6.9e-209 731.1 601 63.6
MSTRG.10328 Avicennia marina HOM05D004402 ORTHO05D005314 4.5e-208 728.4 602 64.1
Peaxi162Scf00311g01314 Petunia axillaris HOM05D004402 ORTHO05D005314 7.6e-208 727.6 598 63.0
Lalb_Chr25g0288951 Lupinus albus HOM05D004402 ORTHO05D005314 1.0e-207 727.2 601 62.4
Ca_08910_v3 Cicer arietinum L. HOM05D004402 ORTHO05D005314 2.2e-207 726.1 601 62.9
Lalb_Chr20g0112571 Lupinus albus HOM05D004402 ORTHO05D005314 2.2e-207 726.1 601 62.7
Sopen10g033410 Solanum pennellii HOM05D004402 ORTHO05D005314 3.8e-207 725.3 598 63.4
HanXRQChr14g0454821 Helianthus annuus HOM05D004402 ORTHO05D005314 1.1e-206 723.8 594 62.5
CAN.G488.15 Capsicum annuum HOM05D004402 ORTHO05D005314 5.5e-206 721.5 598 62.5
Manes.12G084800 Manihot esculenta HOM05D004402 ORTHO05D005314 5.5e-206 721.5 602 63.0
Sc20g0005590 Simmondsia chinensis HOM05D004402 ORTHO05D005314 1.6e-205 719.9 601 61.6
Actinidia28911 Actinidia chinensis HOM05D004402 ORTHO05D005314 2.1e-205 719.5 504 73.2
ClCG10G020050 Citrullus lanatus HOM05D004402 ORTHO05D005314 6.0e-205 718.0 600 61.8
Medtr7g102180 Medicago truncatula HOM05D004402 ORTHO05D005314 6.0e-205 718.0 601 62.9
Dinv37323 Davidia involucrata HOM05D004402 ORTHO05D005314 7.9e-205 717.6 539 69.4
DCAR_015004 Daucus carota HOM05D004402 ORTHO05D005314 3.9e-204 715.3 606 62.4
TWI74G0242 Tripterygium wilfordii HOM05D004402 ORTHO05D005314 3.9e-204 715.3 602 63.1
arahy.Tifrunner.gnm1.ann1.ZWC5L9 Arachis hypogaea HOM05D004402 ORTHO05D005314 1.9e-203 713.0 639 59.2
arahy.Tifrunner.gnm1.ann1.DYK8MJ Arachis hypogaea HOM05D004402 ORTHO05D005314 5.7e-203 711.4 639 59.0
MD12G1109700 Malus domestica HOM05D004402 ORTHO05D005314 5.7e-203 711.4 510 70.2
PSO801G0054 Papaver somniferum HOM05D004402 ORTHO05D005314 7.4e-203 711.1 600 60.2
CsaV3_3G036050 Cucumis sativus L. HOM05D004402 ORTHO05D005314 1.3e-202 710.3 600 61.0
THA.LOC104823232 Tarenaya hassleriana HOM05D004402 ORTHO05D005314 1.3e-202 710.3 601 62.4
DCAR_017670 Daucus carota HOM05D004402 ORTHO05D005314 4.8e-202 708.4 600 62.3
PSO339G5499 Papaver somniferum HOM05D004402 ORTHO05D005314 8.2e-202 707.6 601 60.1
MBI17_g34762_MAGBIO Magnolia biondii HOM05D004402 ORTHO05D005314 1.4e-201 706.8 599 61.1
MD04G1091700 Malus domestica HOM05D004402 ORTHO05D005314 1.4e-201 706.8 508 69.7
Nn2g13812 Nelumbo nucifera HOM05D004402 ORTHO05D005314 9.0e-201 704.1 601 61.9
Aa31LG1G21720 Aethionema arabicum HOM05D004402 ORTHO05D005314 1.5e-200 703.4 596 62.1
ATR0910G004 Amborella trichopoda HOM05D004402 ORTHO05D005314 3.4e-200 702.2 600 60.5
Thhalv10013303m.g Eutrema salsugineum HOM05D004402 ORTHO05D005314 2.2e-199 699.5 601 61.1
TWI77G0706 Tripterygium wilfordii HOM05D004402 ORTHO05D005314 2.9e-199 699.1 599 61.4
PGR004G2373 Punica granatum HOM05D004402 ORTHO05D005314 8.5e-199 697.6 598 62.0
Migut.L01711 Erythranthe guttata HOM05D004402 ORTHO05D005314 7.2e-198 694.5 598 62.0
Solyc10g083960.2 Solanum lycopersicum HOM05D004402 ORTHO05D005314 2.1e-197 693.0 598 61.5
FAN09G4748 Fragaria x ananassa HOM05D004402 ORTHO05D005314 2.7e-197 692.6 600 62.5
BcaB01g05821 Brassica carinata HOM05D004402 ORTHO05D005314 1.0e-196 690.6 601 60.2
CARHR209910 Cardamine hirsuta HOM05D004402 ORTHO05D005314 2.3e-196 689.5 601 60.6
Sed0020729 Sechium edule HOM05D004402 ORTHO05D005314 3.0e-196 689.1 600 60.0
THA.LOC104826918 Tarenaya hassleriana HOM05D004402 ORTHO05D005314 3.0e-196 689.1 599 61.4
SalBow2G1223 Salvia bowleyana HOM05D004402 ORTHO05D005314 6.7e-196 688.0 591 61.4
A03p01170 Brassica napus HOM05D004402 ORTHO05D005314 1.1e-195 687.2 601 60.2
BolC2t06097H Brassica oleracea HOM05D004402 ORTHO05D005314 1.1e-195 687.2 602 60.1
BcaB01g05839 Brassica carinata HOM05D004402 ORTHO05D005314 1.5e-195 686.8 601 60.6
SalBow3G3127 Salvia bowleyana HOM05D004402 ORTHO05D005314 1.5e-195 686.8 591 61.4
C03p01510 Brassica napus HOM05D004402 ORTHO05D005314 1.9e-195 686.4 601 60.6
BraA10t45293Z Brassica rapa HOM05D004402 ORTHO05D005314 2.5e-195 686.0 601 60.1
FAN14G0478 Fragaria x ananassa HOM05D004402 ORTHO05D005314 3.3e-195 685.6 600 61.8
BcaC06g32058 Brassica carinata HOM05D004402 ORTHO05D005314 4.3e-195 685.3 601 60.1
BolC3t12705H Brassica oleracea HOM05D004402 ORTHO05D005314 4.3e-195 685.3 601 60.6
A10p32580 Brassica napus HOM05D004402 ORTHO05D005314 5.7e-195 684.9 601 59.9
Carub.0006s0224 Capsella rubella HOM05D004402 ORTHO05D005314 5.7e-195 684.9 601 59.9
BcaC06g32061 Brassica carinata HOM05D004402 ORTHO05D005314 1.3e-194 683.7 602 60.0
BolC9t60074H Brassica oleracea HOM05D004402 ORTHO05D005314 1.3e-194 683.7 602 60.0
ECA238G0572 Erigeron canadensis HOM05D004402 ORTHO05D005314 1.6e-194 683.3 594 59.8
C02p01070 Brassica napus HOM05D004402 ORTHO05D005314 2.2e-194 682.9 602 59.8
Eucgr.K02925 Eucalyptus grandis HOM05D004402 ORTHO05D005314 2.8e-194 682.6 601 60.4
AL6G12780 Arabidopsis lyrata HOM05D004402 ORTHO05D005314 1.1e-193 680.6 601 60.6
AT5G03430 Arabidopsis thaliana HOM05D004402 ORTHO05D005314 1.8e-193 679.9 603 60.2
C09p73380 Brassica napus HOM05D004402 ORTHO05D005314 1.8e-193 679.9 602 59.8
BraA02t04760Z Brassica rapa HOM05D004402 ORTHO05D005314 5.3e-193 678.3 604 59.8
VMungo1383G0058 Vigna mungo HOM05D004402 ORTHO05D005314 5.3e-193 678.3 497 69.0
Sp6g39310 Schrenkiella parvula HOM05D004402 ORTHO05D005314 4.5e-192 675.2 596 60.1
AUR62026916 Chenopodium quinoa HOM05D004402 ORTHO05D005314 1.0e-191 674.1 598 58.5
BraA03t09499Z Brassica rapa HOM05D004402 ORTHO05D005314 1.0e-188 664.1 582 60.8
CDE10G0806 Ceratophyllum demersum HOM05D004402 ORTHO05D005314 5.1e-188 661.8 599 58.1
Oeu005028.1 Olea europaea HOM05D004402 ORTHO05D005314 5.7e-187 658.3 618 58.4
MELO3C009365.2 Cucumis melo HOM05D004402 ORTHO05D005314 7.4e-187 657.9 600 58.3
FAN05G2520 Fragaria x ananassa HOM05D004402 ORTHO05D005314 4.8e-186 655.2 600 60.0
FAN05G1679 Fragaria x ananassa HOM05D004402 ORTHO05D005314 1.1e-185 654.1 600 60.0
Peaxi162Scf00722g00015 Petunia axillaris HOM05D004402 ORTHO05D005314 5.3e-185 651.7 511 65.2
ECA248G3038 Erigeron canadensis HOM05D004402 ORTHO05D005314 1.2e-184 650.6 589 58.7
Nitab4.5_0000814g0100 Nicotiana tabacum HOM05D004402 ORTHO05D005314 1.0e-183 647.5 601 58.4
EL10Ac7g16646 Beta vulgaris HOM05D004402 ORTHO05D005314 2.2e-183 646.4 650 54.8
Lsat_1_v5_gn_1_51600 Lactuca sativa HOM05D004402 ORTHO05D005314 2.2e-183 646.4 587 58.3
Nitab4.5_0010955g0010 Nicotiana tabacum HOM05D004402 ORTHO05D005314 5.0e-183 645.2 601 57.6
Nitab4.5_0000063g0160 Nicotiana tabacum HOM05D004402 ORTHO05D005314 1.1e-182 644.0 601 58.1
FAN02G2572 Fragaria x ananassa HOM05D004402 ORTHO05D005314 2.5e-182 642.9 625 58.2
AUR62042064 Chenopodium quinoa HOM05D004402 ORTHO05D005314 6.1e-181 638.3 598 56.2
Psat3g041880 Pisum sativum HOM05D004402 ORTHO05D005314 1.4e-177 627.1 541 61.6
BcaB05g21840 Brassica carinata HOM05D004402 ORTHO05D005314 1.8e-177 626.7 591 55.8
BcaC03g13007 Brassica carinata HOM05D004402 ORTHO05D005314 2.0e-176 623.2 487 64.7
SGA_v2.0_scaffold75G24834 Striga asiatica HOM05D004402 ORTHO05D005314 2.2e-175 619.8 601 56.6
Ah.08g211550 Amaranthus hybridus HOM05D004402 ORTHO05D005314 6.5e-175 618.2 598 55.4
Zm00001eb333440 Zea mays HOM05D004402 ORTHO05D005314 5.5e-174 615.1 603 55.1
HPP92_025807 Vanilla planifolia HOM05D004402 ORTHO05D005314 1.2e-173 614.0 599 55.6
CAN.G900.21 Capsicum annuum HOM05D004402 ORTHO05D005314 2.4e-169 599.7 435 68.3
Migut.J00646 Erythranthe guttata HOM05D004402 ORTHO05D005314 2.4e-169 599.7 435 68.7
unitig_60.g25815 Utricularia gibba HOM05D004402 ORTHO05D005314 1.5e-163 580.5 599 53.4
Haze_20522 Corylus avellana HOM05D004402 ORTHO05D005314 1.8e-156 557.0 506 59.7
Hund20335 Selenicereus undatus HOM05D004402 ORTHO05D005314 5.0e-151 538.9 699 47.2
AagrBONN_evm.TU.Sc2ySwM_362.2690 Anthoceros agrestis HOM05D004402 ORTHO05D005314 4.0e-140 502.7 621 46.1
Mapoly0054s0056 Marchantia polymorpha HOM05D004402 ORTHO05D005314 5.8e-139 498.8 539 50.5
SMO146G0130 Selaginella moellendorffii HOM05D004402 ORTHO05D005314 3.2e-129 466.5 508 51.0
TPR.G32815 Trifolium pratense HOM05D004402 ORTHO05D005314 4.1e-129 466.1 370 64.3
SHI12325 Sapria himalayana HOM05D004402 ORTHO05D005314 1.3e-127 461.1 544 49.1
PGSC0003DMG401028184 Solanum tuberosum HOM05D004402 ORTHO05D005314 7.8e-120 435.3 304 71.4
SGA_v2.0_scaffold224G42938 Striga asiatica HOM05D004402 ORTHO05D005314 4.4e-115 419.5 601 44.6
Gohir.A04G071600 Gossypium hirsutum HOM05D004402 ORTHO05D005314 2.8e-109 400.2 331 65.3
Aqoxy3G01670 Aquilegia oxysepala HOM05D004402 ORTHO05D005314 1.2e-99 368.2 335 58.2
SEGI_14784 Sequoiadendron giganteum HOM05D004402 ORTHO05D005314 2.5e-86 323.9 244 67.2
Hma1.2p1_0828F.1_g225130 Hydrangea macrophylla HOM05D004402 ORTHO05D005314 2.6e-83 313.9 235 69.4
Gohir.A04G071700 Gossypium hirsutum HOM05D004402 ORTHO05D005314 3.2e-81 307.0 243 63.0
Zm00001eb128460 Zea mays HOM05D004402 ORTHO05D005314 1.0e-74 285.4 296 51.0
Zm00001eb127890 Zea mays HOM05D004402 ORTHO05D005314 1.8e-71 274.6 320 48.4
HanXRQChr07g0194721 Helianthus annuus HOM05D004402 ORTHO05D005314 8.2e-61 239.2 595 33.4
Cre13.g592500 Chlamydomonas reinhardtii HOM05D004402 ORTHO05D005314 9.1e-60 235.7 587 31.9
PRCOL_00001257 Prasinoderma coloniale HOM05D004402 ORTHO05D005314 1.4e-47 195.3 408 32.1
TAR636G0130 Trochodendron aralioides HOM05D004402 ORTHO05D005314 1.8e-44 184.9 121 72.7
TAR636G0069 Trochodendron aralioides HOM05D004402 ORTHO05D005314 1.2e-40 172.2 183 49.7
PGSC0003DMG400003892 Solanum tuberosum HOM05D004402 ORTHO05D005314 1.2e-35 155.6 114 64.9
VMungo1383G2351 Vigna mungo HOM05D004402 ORTHO05D005314 2.0e-35 154.8 110 72.7
Os01g0259600 Oryza sativa ssp. japonica HOM05D004402 ORTHO05D005314 2.1e-32 144.8 194 44.3
PRCOL_00006213 Prasinoderma coloniale HOM05D004402 ORTHO05D005314 2.9e-29 134.4 172 41.3
SalBow3G0082 Salvia bowleyana HOM05D004402 ORTHO05D005314 4.1e-28 130.6 298 34.2
SalBow3G2408 Salvia bowleyana HOM05D004402 ORTHO05D005314 1.2e-27 129.0 298 33.9
TPR.G11110 Trifolium pratense HOM05D004402 ORTHO05D005314 1.0e-26 125.9 67 85.1
HanXRQChr13g0396631 Helianthus annuus HOM05D004402 ORTHO05D005314 3.0e-18 97.8 73 65.8
SalBow3G1023 Salvia bowleyana HOM05D004402 ORTHO05D005314 9.5e-17 92.8 119 47.9
CAN.G900.20 Capsicum annuum HOM05D004402 ORTHO05D005314 8.3e-13 79.7 85 55.3
Cfa022272 Carpinus fangiana HOM05D004402 ORTHO05D005314 1.1e-12 79.3 149 28.9
Lsat_1_v5_gn_6_17200 Lactuca sativa HOM05D004402 ORTHO05D005314 1.9e-09 68.6 86 45.3
ECA233G2956 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.6e-09 67.0 109 42.2
SEGI_37303 Sequoiadendron giganteum HOM05D004402 ORTHO05D005314 9.5e-09 66.2 87 40.2
CBR_g4032 Chara braunii HOM05D004402 ORTHO05D043925 3.1e-07 61.2 36 75.0
Cre01.g026650 Chlamydomonas reinhardtii HOM05D004402 ORTHO05D007141 2.0e-06 58.5 242 26.0
TAR636G1582 Trochodendron aralioides HOM05D004402 ORTHO05D005314 3.4e-06 57.8 36 72.2


User provided reference genes

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