Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07297 Vaccinium macrocarpon HOM05D006298 ORTHO05D008167 5.7e-189 664.1 331 100.0
Rhsim03G0091000 Rhododendron simsii HOM05D006298 ORTHO05D008167 2.0e-93 346.7 340 60.0
CSS0011355 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 1.0e-81 307.8 344 54.4
CSS0035285 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 5.1e-81 305.4 345 53.9
Actinidia08768 Actinidia chinensis HOM05D006298 ORTHO05D008167 9.7e-80 301.2 345 52.5
QL07p043135 Quercus lobata HOM05D006298 ORTHO05D008167 2.2e-79 300.1 340 52.9
VMungo0720G2332 Vigna mungo HOM05D006298 ORTHO05D008167 1.8e-78 297.0 167 85.6
Manes.08G011200 Manihot esculenta HOM05D006298 ORTHO05D008167 4.1e-78 295.8 205 75.1
Cc06_g04290 Coffea canephora HOM05D006298 ORTHO05D008167 9.1e-78 294.7 304 56.6
Glyma.13G142000 Glycine max HOM05D006298 ORTHO05D008167 1.6e-77 293.9 163 85.3
CiPaw.09G171800 Carya illinoinensis HOM05D006298 ORTHO05D008167 3.5e-77 292.7 163 87.1
COL.COLO4_26951 Corchorus olitorius HOM05D006298 ORTHO05D008167 3.5e-77 292.7 186 79.0
Phvul.007G147500 Phaseolus vulgaris HOM05D006298 ORTHO05D008167 1.7e-76 290.4 167 83.8
Gohir.D01G130400 Gossypium hirsutum HOM05D006298 ORTHO05D008167 2.2e-76 290.0 197 76.1
Gorai.002G161800 Gossypium raimondii HOM05D006298 ORTHO05D008167 2.2e-76 290.0 197 76.1
TAR623G0635 Trochodendron aralioides HOM05D006298 ORTHO05D008167 2.9e-76 289.7 341 50.7
Hma1.2p1_0205F.1_g086920 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 3.8e-76 289.3 337 52.8
Gohir.A01G141763 Gossypium hirsutum HOM05D006298 ORTHO05D008167 5.0e-76 288.9 197 76.1
Cfa017623 Carpinus fangiana HOM05D006298 ORTHO05D008167 6.5e-76 288.5 163 85.3
Lj4g0025039 Lotus japonicus HOM05D006298 ORTHO05D008167 6.5e-76 288.5 253 62.5
Cpa.g.sc102.32 Carica papaya HOM05D006298 ORTHO05D008167 8.5e-76 288.1 164 86.0
Eucgr.K02926 Eucalyptus grandis HOM05D006298 ORTHO05D008167 1.9e-75 287.0 330 51.8
Ciclev10012651m.g Citrus clementina HOM05D006298 ORTHO05D008167 2.5e-75 286.6 165 86.7
Actinidia28907 Actinidia chinensis HOM05D006298 ORTHO05D008167 5.5e-75 285.4 386 47.7
Oeu053684.1 Olea europaea HOM05D006298 ORTHO05D008167 7.2e-75 285.0 348 51.1
CsaV3_3G036020 Cucumis sativus L. HOM05D006298 ORTHO05D008167 9.4e-75 284.6 163 85.9
GSVIVG01033647001 Vitis vinifera HOM05D006298 ORTHO05D008167 9.4e-75 284.6 197 74.6
Glyma.10G054900 Glycine max HOM05D006298 ORTHO05D008167 1.2e-74 284.3 163 84.0
Prupe.7G128900 Prunus persica HOM05D006298 ORTHO05D008167 1.2e-74 284.3 241 64.7
MD04G1092500 Malus domestica HOM05D006298 ORTHO05D008167 1.6e-74 283.9 242 64.9
Thecc.05G068100 Theobroma cacao HOM05D006298 ORTHO05D008167 2.1e-74 283.5 186 78.5
Potri.016G099300 Populus trichocarpa HOM05D006298 ORTHO05D008167 2.7e-74 283.1 163 84.7
PGR142G1273 Punica granatum HOM05D006298 ORTHO05D008167 2.7e-74 283.1 326 52.5
Atru.BG.206.p Acer truncatum HOM05D006298 ORTHO05D008167 3.6e-74 282.7 159 84.9
Thhalv10017183m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 3.6e-74 282.7 164 81.7
FvH4_6g16470 Fragaria vesca HOM05D006298 ORTHO05D008167 3.6e-74 282.7 198 74.2
FAN14G4061 Fragaria x ananassa HOM05D006298 ORTHO05D008167 3.6e-74 282.7 198 74.2
Sabra16G0098900 Salix brachista HOM05D006298 ORTHO05D008167 3.6e-74 282.7 342 50.9
ClCG10G020070 Citrullus lanatus HOM05D006298 ORTHO05D008167 4.7e-74 282.3 163 85.3
DCAR_017674 Daucus carota HOM05D006298 ORTHO05D008167 4.7e-74 282.3 163 84.0
Lj2A120T46 Lonicera japonica HOM05D006298 ORTHO05D008167 4.7e-74 282.3 255 60.8
RcHm_v2.0_Chr3g0470361 Rosa chinensis HOM05D006298 ORTHO05D008167 4.7e-74 282.3 163 85.3
FAN05G1999 Fragaria x ananassa HOM05D006298 ORTHO05D008167 8.0e-74 281.6 198 74.2
FAN05G2800 Fragaria x ananassa HOM05D006298 ORTHO05D008167 8.0e-74 281.6 198 74.2
FAN02G1782 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.4e-73 280.8 198 73.7
Sp4g19190 Schrenkiella parvula HOM05D006298 ORTHO05D008167 1.8e-73 280.4 164 81.1
Haze_20529 Corylus avellana HOM05D006298 ORTHO05D008167 4.0e-73 279.3 183 76.5
Migut.J00651 Erythranthe guttata HOM05D006298 ORTHO05D008167 4.0e-73 279.3 248 59.7
FAN09G1272 Fragaria x ananassa HOM05D006298 ORTHO05D008167 4.0e-73 279.3 198 73.2
Lalb_Chr21g0315031 Lupinus albus HOM05D006298 ORTHO05D008167 6.7e-73 278.5 163 82.8
Carub.0004s1875 Capsella rubella HOM05D006298 ORTHO05D008167 1.5e-72 277.3 164 81.1
Sed0010557 Sechium edule HOM05D006298 ORTHO05D008167 2.6e-72 276.6 199 72.9
Sc20g0005540 Simmondsia chinensis HOM05D006298 ORTHO05D008167 3.3e-72 276.2 186 71.5
arahy.Tifrunner.gnm1.ann1.GSM08A Arachis hypogaea HOM05D006298 ORTHO05D008167 5.7e-72 275.4 163 82.2
arahy.Tifrunner.gnm1.ann1.UZM884 Arachis hypogaea HOM05D006298 ORTHO05D008167 5.7e-72 275.4 163 82.2
Duzib106G2039 Durio zibethinus HOM05D006298 ORTHO05D008167 1.7e-71 273.9 161 83.2
Ca_11509_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 2.2e-71 273.5 163 81.6
Psat6g073640 Pisum sativum HOM05D006298 ORTHO05D008167 2.2e-71 273.5 163 80.4
Nitab4.5_0000063g0130 Nicotiana tabacum HOM05D006298 ORTHO05D008167 3.7e-71 272.7 164 78.7
Nitab4.5_0000814g0050 Nicotiana tabacum HOM05D006298 ORTHO05D008167 3.7e-71 272.7 164 78.7
SGA_v2.0_scaffold40G15525 Striga asiatica HOM05D006298 ORTHO05D008167 4.8e-71 272.3 163 81.6
THA.LOC104807061 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 4.8e-71 272.3 164 79.9
EL10Ac7g16640 Beta vulgaris HOM05D006298 ORTHO05D008167 1.1e-70 271.2 197 70.6
PSO339G0145 Papaver somniferum HOM05D006298 ORTHO05D008167 1.4e-70 270.8 204 69.1
PGSC0003DMG400028288 Solanum tuberosum HOM05D006298 ORTHO05D008167 1.4e-70 270.8 246 58.9
Aqoxy1G01145 Aquilegia oxysepala HOM05D006298 ORTHO05D008167 2.4e-70 270.0 164 81.7
TWI53G1706 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 2.4e-70 270.0 164 81.1
TPR.G11270 Trifolium pratense HOM05D006298 ORTHO05D008167 5.3e-70 268.9 163 80.4
PSO063G5537 Papaver somniferum HOM05D006298 ORTHO05D008167 9.1e-70 268.1 204 70.1
HPP92_022584 Vanilla planifolia HOM05D006298 ORTHO05D008167 9.1e-70 268.1 163 76.1
ATR0219G012 Amborella trichopoda HOM05D006298 ORTHO05D008167 1.6e-69 267.3 169 76.9
HanXRQChr11g0350481 Helianthus annuus HOM05D006298 ORTHO05D008167 2.0e-69 266.9 328 50.3
Aa31LG5G22130 Aethionema arabicum HOM05D006298 ORTHO05D008167 2.7e-69 266.5 163 77.3
BcaB06g28958 Brassica carinata HOM05D006298 ORTHO05D008167 4.5e-69 265.8 163 79.8
TWI77G0409 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 4.5e-69 265.8 163 79.8
Peaxi162Scf00311g01110 Petunia axillaris HOM05D006298 ORTHO05D008167 7.7e-69 265.0 164 77.4
Lsat_1_v5_gn_1_51681 Lactuca sativa HOM05D006298 ORTHO05D008167 1.0e-68 264.6 334 48.8
Sopen10g033440 Solanum pennellii HOM05D006298 ORTHO05D008167 1.3e-68 264.2 338 48.8
Os03g0152600 Oryza sativa ssp. japonica HOM05D006298 ORTHO05D008167 1.7e-68 263.8 182 71.4
Solyc10g083990.2 Solanum lycopersicum HOM05D006298 ORTHO05D008167 2.2e-68 263.5 338 48.8
CDE04G2630 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 3.8e-68 262.7 232 59.1
A04p28210 Brassica napus HOM05D006298 ORTHO05D008167 6.5e-68 261.9 164 77.4
C04p65570 Brassica napus HOM05D006298 ORTHO05D008167 6.5e-68 261.9 164 77.4
BraA04t18305Z Brassica rapa HOM05D006298 ORTHO05D008167 6.5e-68 261.9 164 77.4
CANSAT80G2892 Cannabis sativa HOM05D006298 ORTHO05D008167 8.5e-68 261.5 163 80.4
BcaC02g07571 Brassica carinata HOM05D006298 ORTHO05D008167 1.1e-67 261.2 164 77.4
BolC4t28046H Brassica oleracea HOM05D006298 ORTHO05D008167 1.1e-67 261.2 164 77.4
MBI18_g02636_MAGBIO Magnolia biondii HOM05D006298 ORTHO05D008167 1.9e-67 260.4 194 69.1
AT2G36895 Arabidopsis thaliana HOM05D006298 ORTHO05D008167 3.2e-67 259.6 190 67.9
AUR62040336 Chenopodium quinoa HOM05D006298 ORTHO05D008167 4.2e-67 259.2 163 75.5
THA.LOC104805233 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 4.2e-67 259.2 193 68.4
CDE03G0133 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 1.6e-66 257.3 202 62.9
AUR62042070 Chenopodium quinoa HOM05D006298 ORTHO05D008167 2.7e-66 256.5 163 73.0
AUR62044331 Chenopodium quinoa HOM05D006298 ORTHO05D008167 2.7e-66 256.5 163 73.0
Ah.08g211590 Amaranthus hybridus HOM05D006298 ORTHO05D008167 3.4e-64 249.6 163 73.0
AL4G33120 Arabidopsis lyrata HOM05D006298 ORTHO05D008167 9.8e-64 248.1 212 63.2
ECA248G3050 Erigeron canadensis HOM05D006298 ORTHO05D008167 1.8e-62 243.8 154 79.2
Nn6g35281 Nelumbo nucifera HOM05D006298 ORTHO05D008167 4.5e-61 239.2 164 75.0
Pp3c6_17550 Physcomitrium patens HOM05D006298 ORTHO05D008167 7.5e-56 221.9 163 67.5
unitig_26.g9235 Utricularia gibba HOM05D006298 ORTHO05D008167 2.4e-54 216.9 130 80.8
Mapoly0063s0087 Marchantia polymorpha HOM05D006298 ORTHO05D008167 3.1e-54 216.5 169 62.1
SMO119G0246 Selaginella moellendorffii HOM05D006298 ORTHO05D008167 1.6e-53 214.2 198 57.1
AUR62042510 Chenopodium quinoa HOM05D006298 ORTHO05D008167 5.9e-53 212.2 133 75.9
Atru.chr8.1795 Acer truncatum HOM05D006298 ORTHO05D008167 1.3e-52 211.1 110 90.9
Duzib093G1320 Durio zibethinus HOM05D006298 ORTHO05D008167 3.0e-49 199.9 163 64.4
SEGI_37587 Sequoiadendron giganteum HOM05D006298 ORTHO05D008167 4.0e-49 199.5 131 71.0
Dinv35789 Davidia involucrata HOM05D006298 ORTHO05D008167 7.5e-48 195.3 284 45.4
Zm00001eb403160 Zea mays HOM05D006298 ORTHO05D008167 1.6e-42 177.6 133 66.9
CARHR131360 Cardamine hirsuta HOM05D006298 ORTHO05D008167 2.9e-39 166.8 90 86.7
Medtr1g063100 Medicago truncatula HOM05D006298 ORTHO05D008167 2.9e-39 166.8 107 73.8
BcaC02g07569 Brassica carinata HOM05D006298 ORTHO05D008167 4.1e-38 162.9 117 70.9
AagrBONN_evm.TU.Sc2ySwM_228.4347 Anthoceros agrestis HOM05D006298 ORTHO05D008167 2.9e-31 140.2 116 59.5
CBR_g45378 Chara braunii HOM05D006298 ORTHO05D008167 2.7e-29 133.7 97 66.0
Hma1.2p1_0205F.1_g086930 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 3.5e-29 133.3 246 40.7
Cre11.g469100 Chlamydomonas reinhardtii HOM05D006298 ORTHO05D008167 3.3e-27 126.7 154 46.8
Thhalv10000465m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 1.4e-25 121.3 96 67.7
Medtr6g035275 Medicago truncatula HOM05D006298 ORTHO05D008167 1.6e-21 107.8 56 91.1
MD12G1110600 Malus domestica HOM05D006298 ORTHO05D008167 1.2e-16 91.7 49 83.7
BcaB01g03809 Brassica carinata HOM05D006298 ORTHO05D008167 7.6e-16 89.0 76 55.3
BcaC04g19302 Brassica carinata HOM05D006298 ORTHO05D008167 2.2e-15 87.4 56 75.0
BcaC02g07570 Brassica carinata HOM05D006298 ORTHO05D008167 1.6e-10 71.2 38 76.3
CSS0032719 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-07 60.8 127 37.0
Prupe.4G234300 Prunus persica HOM05D006298 ORTHO05D007008 1.1e-06 58.5 31 80.6
CSS0023138 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-06 58.2 84 51.2
arahy.Tifrunner.gnm1.ann1.31G0Q2 Arachis hypogaea HOM05D006298 ORTHO05D082484 7.1e-06 55.8 33 75.8


User provided reference genes

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