Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07293 Vaccinium macrocarpon HOM05D006449 ORTHO05D007995 7.0e-62 240.4 114 100.0
CSS0028691 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 1.4e-38 162.9 98 79.6
Haze_20546 Corylus avellana HOM05D006449 ORTHO05D007995 1.4e-38 162.9 100 77.0
Oeu005023.1 Olea europaea HOM05D006449 ORTHO05D007995 1.6e-37 159.5 102 75.5
Actinidia08770 Actinidia chinensis HOM05D006449 ORTHO05D007995 1.1e-35 153.3 98 74.5
CSS0018897 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 1.5e-35 152.9 98 74.5
Glyma.13G142300 Glycine max HOM05D006449 ORTHO05D007995 1.9e-35 152.5 98 74.5
Oeu041490.2 Olea europaea HOM05D006449 ORTHO05D007995 1.9e-35 152.5 100 74.0
Hma1.2p1_0205F.1_g086990 Hydrangea macrophylla HOM05D006449 ORTHO05D007995 7.3e-35 150.6 98 74.5
Nn6g35286 Nelumbo nucifera HOM05D006449 ORTHO05D007995 7.3e-35 150.6 98 73.5
Duzib093G0849 Durio zibethinus HOM05D006449 ORTHO05D007995 9.5e-35 150.2 98 73.5
Migut.J00654 Erythranthe guttata HOM05D006449 ORTHO05D007995 9.5e-35 150.2 99 70.7
Glyma.10G055200 Glycine max HOM05D006449 ORTHO05D007995 1.6e-34 149.4 98 71.4
CiPaw.10G129500 Carya illinoinensis HOM05D006449 ORTHO05D007995 4.7e-34 147.9 98 70.4
Thecc.05G067500 Theobroma cacao HOM05D006449 ORTHO05D007995 6.2e-34 147.5 98 72.4
Manes.09G065800 Manihot esculenta HOM05D006449 ORTHO05D007995 8.1e-34 147.1 98 71.4
Phvul.007G219000 Phaseolus vulgaris HOM05D006449 ORTHO05D007995 8.1e-34 147.1 98 71.4
GSVIVG01033644001 Vitis vinifera HOM05D006449 ORTHO05D007995 8.1e-34 147.1 98 73.5
arahy.Tifrunner.gnm1.ann1.9GBJ25 Arachis hypogaea HOM05D006449 ORTHO05D007995 1.1e-33 146.7 99 70.7
arahy.Tifrunner.gnm1.ann1.D9FX9P Arachis hypogaea HOM05D006449 ORTHO05D007995 1.1e-33 146.7 99 70.7
AUR62042508 Chenopodium quinoa HOM05D006449 ORTHO05D007995 1.4e-33 146.4 98 70.4
DCAR_015000 Daucus carota HOM05D006449 ORTHO05D007995 2.3e-33 145.6 99 72.7
Nn2g13802 Nelumbo nucifera HOM05D006449 ORTHO05D007995 2.3e-33 145.6 98 70.4
Aqoxy1G01150 Aquilegia oxysepala HOM05D006449 ORTHO05D007995 4.0e-33 144.8 98 69.4
EL10Ac7g16636 Beta vulgaris HOM05D006449 ORTHO05D007995 6.8e-33 144.1 103 67.0
AUR62040339 Chenopodium quinoa HOM05D006449 ORTHO05D007995 6.8e-33 144.1 98 69.4
Gorai.002G246900 Gossypium raimondii HOM05D006449 ORTHO05D007995 1.2e-32 143.3 98 70.4
Medtr1g063190 Medicago truncatula HOM05D006449 ORTHO05D007995 1.2e-32 143.3 98 69.4
VMungo0720G3134 Vigna mungo HOM05D006449 ORTHO05D007995 1.2e-32 143.3 98 69.4
MSTRG.5764 Avicennia marina HOM05D006449 ORTHO05D007995 1.5e-32 142.9 103 68.0
Gohir.A01G213500 Gossypium hirsutum HOM05D006449 ORTHO05D007995 1.5e-32 142.9 98 70.4
Nitab4.5_0029554g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 1.5e-32 142.9 99 67.7
ClCG04G009390 Citrullus lanatus HOM05D006449 ORTHO05D007995 2.0e-32 142.5 98 69.4
Gohir.D01G202200 Gossypium hirsutum HOM05D006449 ORTHO05D007995 2.0e-32 142.5 98 70.4
Nitab4.5_0003861g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 2.0e-32 142.5 103 67.0
HanXRQChr15g0491571 Helianthus annuus HOM05D006449 ORTHO05D007995 2.6e-32 142.1 98 69.4
Lj5g0001377 Lotus japonicus HOM05D006449 ORTHO05D007995 3.4e-32 141.7 98 69.4
Sc20g0005520 Simmondsia chinensis HOM05D006449 ORTHO05D007995 3.4e-32 141.7 99 68.7
PGSC0003DMG400003863 Solanum tuberosum HOM05D006449 ORTHO05D007995 4.4e-32 141.4 103 66.0
CsaV3_6G039970 Cucumis sativus L. HOM05D006449 ORTHO05D007995 5.8e-32 141.0 98 69.4
Ca_11505_v3 Cicer arietinum L. HOM05D006449 ORTHO05D007995 7.6e-32 140.6 98 68.4
PGR004G0793 Punica granatum HOM05D006449 ORTHO05D007995 7.6e-32 140.6 98 69.4
Nitab4.5_0000814g0040 Nicotiana tabacum HOM05D006449 ORTHO05D007995 1.3e-31 139.8 103 65.0
Psat6g074040 Pisum sativum HOM05D006449 ORTHO05D007995 1.7e-31 139.4 98 66.3
Solyc09g008230.3 Solanum lycopersicum HOM05D006449 ORTHO05D007995 1.7e-31 139.4 103 65.0
Sopen09g003050 Solanum pennellii HOM05D006449 ORTHO05D007995 1.7e-31 139.4 103 65.0
Potri.016G093500 Populus trichocarpa HOM05D006449 ORTHO05D007995 2.9e-31 138.7 101 72.3
FvH4_6g16440 Fragaria vesca HOM05D006449 ORTHO05D007995 4.9e-31 137.9 100 67.0
FAN05G0981 Fragaria x ananassa HOM05D006449 ORTHO05D007995 4.9e-31 137.9 100 67.0
FAN14G2797 Fragaria x ananassa HOM05D006449 ORTHO05D007995 4.9e-31 137.9 100 67.0
FAN14G3008 Fragaria x ananassa HOM05D006449 ORTHO05D007995 4.9e-31 137.9 100 67.0
CAN.G900.29 Capsicum annuum HOM05D006449 ORTHO05D007995 6.4e-31 137.5 103 64.1
CDE09G0874 Ceratophyllum demersum HOM05D006449 ORTHO05D007995 6.4e-31 137.5 105 64.8
Peaxi162Scf00638g00414 Petunia axillaris HOM05D006449 ORTHO05D007995 6.4e-31 137.5 103 67.0
SEGI_04945 Sequoiadendron giganteum HOM05D006449 ORTHO05D007995 6.4e-31 137.5 98 66.3
TPR.G11267 Trifolium pratense HOM05D006449 ORTHO05D007995 6.4e-31 137.5 103 64.1
Peaxi162Scf00311g00119 Petunia axillaris HOM05D006449 ORTHO05D007995 8.4e-31 137.1 103 64.1
Sabra16G0098600 Salix brachista HOM05D006449 ORTHO05D007995 1.1e-30 136.7 101 68.3
Ciclev10013228m.g Citrus clementina HOM05D006449 ORTHO05D007995 1.9e-30 136.0 96 67.7
FAN02G2429 Fragaria x ananassa HOM05D006449 ORTHO05D007995 2.4e-30 135.6 100 66.0
Atru.chr8.1798 Acer truncatum HOM05D006449 ORTHO05D007995 3.2e-30 135.2 103 64.1
RcHm_v2.0_Chr3g0470301 Rosa chinensis HOM05D006449 ORTHO05D007995 3.2e-30 135.2 100 66.0
Sed0015731 Sechium edule HOM05D006449 ORTHO05D007995 3.2e-30 135.2 98 64.3
unitig_749.g14285 Utricularia gibba HOM05D006449 ORTHO05D007995 5.4e-30 134.4 98 67.3
Cfa017617 Carpinus fangiana HOM05D006449 ORTHO05D007995 7.1e-30 134.0 100 69.0
TWI74G0214 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 1.2e-29 133.3 96 66.7
TWI77G0881 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 1.6e-29 132.9 96 66.7
Hund26578 Selenicereus undatus HOM05D006449 ORTHO05D007995 2.7e-29 132.1 98 64.3
Hund20380 Selenicereus undatus HOM05D006449 ORTHO05D007995 1.7e-28 129.4 98 63.3
THA.LOC104823475 Tarenaya hassleriana HOM05D006449 ORTHO05D007995 3.0e-28 128.6 96 65.6
AT2G36930 Arabidopsis thaliana HOM05D006449 ORTHO05D007995 5.1e-28 127.9 101 61.4
Zm00001eb038700 Zea mays HOM05D006449 ORTHO05D007995 5.1e-28 127.9 103 61.2
Rhsim03G0091200 Rhododendron simsii HOM05D006449 ORTHO05D007995 6.6e-28 127.5 60 95.0
Thhalv10017435m.g Eutrema salsugineum HOM05D006449 ORTHO05D007995 1.1e-27 126.7 96 62.5
BcaB01g03807 Brassica carinata HOM05D006449 ORTHO05D007995 1.5e-27 126.3 96 62.5
A05p08950 Brassica napus HOM05D006449 ORTHO05D007995 1.5e-27 126.3 96 62.5
C04p11060 Brassica napus HOM05D006449 ORTHO05D007995 1.5e-27 126.3 96 62.5
BolC4t22754H Brassica oleracea HOM05D006449 ORTHO05D007995 1.5e-27 126.3 96 62.5
BraA05t19857Z Brassica rapa HOM05D006449 ORTHO05D007995 1.5e-27 126.3 96 62.5
ECA248G0052 Erigeron canadensis HOM05D006449 ORTHO05D007995 1.5e-27 126.3 98 64.3
BcaB02g09320 Brassica carinata HOM05D006449 ORTHO05D007995 3.3e-27 125.2 96 61.5
BcaC01g05620 Brassica carinata HOM05D006449 ORTHO05D007995 3.3e-27 125.2 96 61.5
BcaC02g11815 Brassica carinata HOM05D006449 ORTHO05D007995 3.3e-27 125.2 96 61.5
A03p20330 Brassica napus HOM05D006449 ORTHO05D007995 3.3e-27 125.2 96 61.5
C03p23890 Brassica napus HOM05D006449 ORTHO05D007995 3.3e-27 125.2 96 61.5
BolC3t14781H Brassica oleracea HOM05D006449 ORTHO05D007995 3.3e-27 125.2 96 61.5
BraA03t11279Z Brassica rapa HOM05D006449 ORTHO05D007995 3.3e-27 125.2 96 61.5
Carub.0004s1878 Capsella rubella HOM05D006449 ORTHO05D007995 3.3e-27 125.2 96 62.5
CARHR131400 Cardamine hirsuta HOM05D006449 ORTHO05D007995 5.6e-27 124.4 96 61.5
Sp4g19220 Schrenkiella parvula HOM05D006449 ORTHO05D007995 5.6e-27 124.4 96 61.5
Os08g0564500 Oryza sativa ssp. japonica HOM05D006449 ORTHO05D007995 7.3e-27 124.0 103 59.2
AL4G33170 Arabidopsis lyrata HOM05D006449 ORTHO05D007995 1.6e-26 122.9 96 60.4
Lsat_1_v5_gn_1_52340 Lactuca sativa HOM05D006449 ORTHO05D007995 8.1e-26 120.6 98 59.2
COL.COLO4_26955 Corchorus olitorius HOM05D006449 ORTHO05D007995 1.2e-24 116.7 61 83.6
SGA_v2.0_scaffold75G24848 Striga asiatica HOM05D006449 ORTHO05D007995 1.3e-23 113.2 103 56.3
HanXRQChr01g0027751 Helianthus annuus HOM05D006449 ORTHO05D007995 2.2e-23 112.5 59 81.4
Manes.08G011000 Manihot esculenta HOM05D006449 ORTHO05D007995 2.9e-23 112.1 98 62.2
SGA_v2.0_scaffold40G15520 Striga asiatica HOM05D006449 ORTHO05D007995 6.4e-23 110.9 71 71.8
Sabra06G0098200 Salix brachista HOM05D006449 ORTHO05D007995 8.4e-23 110.5 68 80.9
Aa31LG5G22150 Aethionema arabicum HOM05D006449 ORTHO05D007995 1.9e-22 109.4 101 53.5
QL07p043219 Quercus lobata HOM05D006449 ORTHO05D007995 3.2e-22 108.6 54 85.2
Mapoly0185s0018 Marchantia polymorpha HOM05D006449 ORTHO05D007995 4.2e-22 108.2 97 55.7
Lalb_Chr02g0155801 Lupinus albus HOM05D006449 ORTHO05D007995 7.1e-22 107.5 54 83.3
Prupe.7G129700 Prunus persica HOM05D006449 ORTHO05D007995 2.3e-20 102.4 77 63.6
Pp3c13_22060 Physcomitrium patens HOM05D006449 ORTHO05D007995 2.5e-19 99.0 97 50.5
CANSAT80G0535 Cannabis sativa HOM05D006449 ORTHO05D007995 7.3e-19 97.4 59 76.3
MELO3C024474.2 Cucumis melo HOM05D006449 ORTHO05D007995 7.3e-19 97.4 54 77.8
Cc06_g04250 Coffea canephora HOM05D006449 ORTHO05D007995 1.6e-18 96.3 49 85.7
PSO063G3287 Papaver somniferum HOM05D006449 ORTHO05D007995 2.1e-18 95.9 78 61.5
PSO339G4301 Papaver somniferum HOM05D006449 ORTHO05D007995 2.1e-18 95.9 78 61.5
ATR0219G007 Amborella trichopoda HOM05D006449 ORTHO05D007995 3.6e-18 95.1 54 68.5
MD12G1112600 Malus domestica HOM05D006449 ORTHO05D007995 6.2e-18 94.4 59 66.1
MD00G1155400 Malus domestica HOM05D006449 ORTHO05D007995 1.4e-17 93.2 59 66.1
Potri.006G124100 Populus trichocarpa HOM05D006449 ORTHO05D007995 2.6e-16 89.0 40 92.5
HPP92_025806 Vanilla planifolia HOM05D006449 ORTHO05D007995 7.6e-16 87.4 56 66.1
SMO144G0185 Selaginella moellendorffii HOM05D006449 ORTHO05D007995 7.9e-13 77.4 47 68.1
HanXRQChr16g0526221 Helianthus annuus HOM05D006449 ORTHO05D007995 1.4e-09 66.6 30 90.0
Lj3A986G82 Lonicera japonica HOM05D006449 ORTHO05D007995 3.1e-09 65.5 36 86.1


User provided reference genes

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