Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07276 Vaccinium macrocarpon HOM05D005413 ORTHO05D006536 3.4e-236 821.6 527 100.0
Rhsim03G0094100 Rhododendron simsii HOM05D005413 ORTHO05D006536 3.0e-67 260.4 248 80.2
CSS0050484 Camellia sinensis var. sinensis HOM05D005413 ORTHO05D006536 1.4e-59 235.0 230 59.6
Dinv04422 Davidia involucrata HOM05D005413 ORTHO05D006536 7.2e-53 212.6 246 50.8
Hma1.2p1_0098F.1_g048260 Hydrangea macrophylla HOM05D005413 ORTHO05D006536 1.4e-48 198.4 241 49.8
TAR623G0045 Trochodendron aralioides HOM05D005413 ORTHO05D006536 1.5e-42 178.3 245 44.1
Potri.010G244600 Populus trichocarpa HOM05D005413 ORTHO05D006536 6.4e-41 172.9 228 46.5
Potri.008G001700 Populus trichocarpa HOM05D005413 ORTHO05D006536 2.4e-40 171.0 251 45.0
Sabra10G0191100 Salix brachista HOM05D005413 ORTHO05D006536 4.6e-39 166.8 143 62.9
Nn2g14375 Nelumbo nucifera HOM05D005413 ORTHO05D006536 5.9e-39 166.4 245 44.1
QL04p048808 Quercus lobata HOM05D005413 ORTHO05D006536 1.3e-38 165.2 236 57.2
CSS0023574 Camellia sinensis var. sinensis HOM05D005413 ORTHO05D006536 1.7e-38 164.9 246 41.5
Potri.008G015500 Populus trichocarpa HOM05D005413 ORTHO05D006536 1.7e-38 164.9 251 43.8
Dinv03807 Davidia involucrata HOM05D005413 ORTHO05D006536 4.3e-37 160.2 206 47.1
Ciclev10028962m.g Citrus clementina HOM05D005413 ORTHO05D006536 4.7e-36 156.8 145 56.6
Sabra08G0009400 Salix brachista HOM05D005413 ORTHO05D006536 4.7e-36 156.8 246 42.7
Hma1.2p1_0101F.1_g049660 Hydrangea macrophylla HOM05D005413 ORTHO05D006536 1.4e-35 155.2 144 58.3
MBI15_g31416_MAGBIO Magnolia biondii HOM05D005413 ORTHO05D006536 1.8e-35 154.8 144 56.2
QL01p019216 Quercus lobata HOM05D005413 ORTHO05D006536 8.9e-35 152.5 244 39.3
Oeu033267.1 Olea europaea HOM05D005413 ORTHO05D006536 1.2e-34 152.1 154 54.5
TAR633G2414 Trochodendron aralioides HOM05D005413 ORTHO05D006536 3.4e-34 150.6 269 36.8
Actinidia11676 Actinidia chinensis HOM05D005413 ORTHO05D006536 7.5e-34 149.4 145 57.9
CiPaw.14G092700 Carya illinoinensis HOM05D005413 ORTHO05D006536 7.5e-34 149.4 146 55.5
Actinidia37056 Actinidia chinensis HOM05D005413 ORTHO05D006536 9.8e-34 149.1 145 57.2
Dinv18856 Davidia involucrata HOM05D005413 ORTHO05D006536 1.3e-33 148.7 139 57.6
TWI79G1192 Tripterygium wilfordii HOM05D005413 ORTHO05D006536 1.7e-33 148.3 246 40.7
GSVIVG01037530001 Vitis vinifera HOM05D005413 ORTHO05D006536 1.7e-33 148.3 144 54.9
Lj2A950G18 Lonicera japonica HOM05D005413 ORTHO05D006536 2.2e-33 147.9 248 39.1
Hund06812 Selenicereus undatus HOM05D005413 ORTHO05D006536 1.4e-32 145.2 151 55.0
Sc09g0004800 Simmondsia chinensis HOM05D005413 ORTHO05D006536 9.2e-32 142.5 133 57.9
Haze_03431 Corylus avellana HOM05D005413 ORTHO05D006536 1.6e-31 141.7 140 55.0
PGSC0003DMG400002998 Solanum tuberosum HOM05D005413 ORTHO05D006536 1.6e-31 141.7 144 54.2
RcHm_v2.0_Chr5g0049091 Rosa chinensis HOM05D005413 ORTHO05D006536 3.5e-31 140.6 144 53.5
Sopen11g029620 Solanum pennellii HOM05D005413 ORTHO05D006536 3.5e-31 140.6 144 54.2
MSTRG.12398 Avicennia marina HOM05D005413 ORTHO05D006536 4.6e-31 140.2 145 54.5
Nitab4.5_0000158g0110 Nicotiana tabacum HOM05D005413 ORTHO05D006536 6.0e-31 139.8 148 52.7
Solyc11g071950.3 Solanum lycopersicum HOM05D005413 ORTHO05D006536 6.0e-31 139.8 144 54.2
Cfa010502 Carpinus fangiana HOM05D005413 ORTHO05D006536 7.8e-31 139.4 143 53.1
COL.COLO4_00160 Corchorus olitorius HOM05D005413 ORTHO05D006536 1.0e-30 139.0 150 54.0
FvH4_3g26150 Fragaria vesca HOM05D005413 ORTHO05D006536 1.0e-30 139.0 144 52.1
FAN11G2501 Fragaria x ananassa HOM05D005413 ORTHO05D006536 1.0e-30 139.0 150 50.7
Oeu031446.2 Olea europaea HOM05D005413 ORTHO05D006536 1.0e-30 139.0 147 51.0
Nitab4.5_0008364g0010 Nicotiana tabacum HOM05D005413 ORTHO05D006536 1.7e-30 138.3 147 52.4
ClCG02G022490 Citrullus lanatus HOM05D005413 ORTHO05D006536 3.0e-30 137.5 164 47.0
DCAR_012252 Daucus carota HOM05D005413 ORTHO05D006536 3.0e-30 137.5 163 50.3
Ca_10423_v3 Cicer arietinum L. HOM05D005413 ORTHO05D006536 5.0e-30 136.7 143 55.2
Cc01_g07840 Coffea canephora HOM05D005413 ORTHO05D006536 6.6e-30 136.3 142 52.1
Lj5g0017620 Lotus japonicus HOM05D005413 ORTHO05D006536 6.6e-30 136.3 155 51.6
Thecc.09G267600 Theobroma cacao HOM05D005413 ORTHO05D006536 6.6e-30 136.3 135 53.3
MELO3C014525.2 Cucumis melo HOM05D005413 ORTHO05D006536 1.1e-29 135.6 142 50.0
CsaV3_6G038630 Cucumis sativus L. HOM05D005413 ORTHO05D006536 1.1e-29 135.6 142 50.0
PSO339G2181 Papaver somniferum HOM05D005413 ORTHO05D006536 1.1e-29 135.6 168 45.2
AUR62024117 Chenopodium quinoa HOM05D005413 ORTHO05D006536 1.5e-29 135.2 150 52.0
Thecc.10G119400 Theobroma cacao HOM05D005413 ORTHO05D006536 2.5e-29 134.4 188 46.8
Eucgr.J00585 Eucalyptus grandis HOM05D005413 ORTHO05D006536 4.3e-29 133.7 145 51.0
PSO384G0849 Papaver somniferum HOM05D005413 ORTHO05D006536 5.6e-29 133.3 168 44.0
FAN16G0400 Fragaria x ananassa HOM05D005413 ORTHO05D006536 7.3e-29 132.9 145 49.7
FAN16G2334 Fragaria x ananassa HOM05D005413 ORTHO05D006536 7.3e-29 132.9 145 49.7
Gohir.D05G079900 Gossypium hirsutum HOM05D005413 ORTHO05D006536 7.3e-29 132.9 255 36.9
Gorai.009G081500 Gossypium raimondii HOM05D005413 ORTHO05D006536 7.3e-29 132.9 255 36.9
Peaxi162Scf00429g00512 Petunia axillaris HOM05D005413 ORTHO05D006536 7.3e-29 132.9 150 50.0
TPR.G10267 Trifolium pratense HOM05D005413 ORTHO05D006536 9.5e-29 132.5 141 55.3
AUR62005613 Chenopodium quinoa HOM05D005413 ORTHO05D006536 1.2e-28 132.1 149 52.3
FAN25G1874 Fragaria x ananassa HOM05D005413 ORTHO05D006536 1.2e-28 132.1 150 48.7
Duzib168G1403 Durio zibethinus HOM05D005413 ORTHO05D006536 1.6e-28 131.7 254 37.4
Duzib170G0305 Durio zibethinus HOM05D005413 ORTHO05D006536 2.1e-28 131.3 252 36.1
Ah.03g136210 Amaranthus hybridus HOM05D005413 ORTHO05D006536 3.6e-28 130.6 136 55.1
Gohir.A05G077100 Gossypium hirsutum HOM05D005413 ORTHO05D006536 3.6e-28 130.6 255 36.5
Manes.11G103700 Manihot esculenta HOM05D005413 ORTHO05D006536 3.6e-28 130.6 252 37.7
Medtr1g090350 Medicago truncatula HOM05D005413 ORTHO05D006536 3.6e-28 130.6 145 53.1
Prupe.6G147200 Prunus persica HOM05D005413 ORTHO05D006536 3.6e-28 130.6 230 37.0
ATR1120G017 Amborella trichopoda HOM05D005413 ORTHO05D006536 4.7e-28 130.2 147 49.0
Lalb_Chr19g0136161 Lupinus albus HOM05D005413 ORTHO05D006536 4.7e-28 130.2 148 50.0
PGR119G0748 Punica granatum HOM05D005413 ORTHO05D006536 8.1e-28 129.4 147 49.0
Lsat_1_v5_gn_2_106300 Lactuca sativa HOM05D005413 ORTHO05D006536 1.1e-27 129.0 106 65.1
CDE04G1023 Ceratophyllum demersum HOM05D005413 ORTHO05D006536 1.4e-27 128.6 161 47.8
TPR.G4599 Trifolium pratense HOM05D005413 ORTHO05D006536 1.8e-27 128.3 141 48.9
Medtr4g050330 Medicago truncatula HOM05D005413 ORTHO05D006536 3.1e-27 127.5 136 48.5
Atru.chr3.3078 Acer truncatum HOM05D005413 ORTHO05D006536 8.9e-27 125.9 144 48.6
Atru.chr3.3087 Acer truncatum HOM05D005413 ORTHO05D006536 8.9e-27 125.9 144 48.6
ECA238G0598 Erigeron canadensis HOM05D005413 ORTHO05D006536 8.9e-27 125.9 147 51.0
Migut.D02382 Erythranthe guttata HOM05D005413 ORTHO05D006536 8.9e-27 125.9 147 49.0
arahy.Tifrunner.gnm1.ann1.K4CWT5 Arachis hypogaea HOM05D005413 ORTHO05D006536 1.2e-26 125.6 142 49.3
arahy.Tifrunner.gnm1.ann1.C0JSMI Arachis hypogaea HOM05D005413 ORTHO05D006536 1.5e-26 125.2 142 49.3
MD11G1174800 Malus domestica HOM05D005413 ORTHO05D006536 2.0e-26 124.8 145 49.0
Os03g0274700 Oryza sativa ssp. japonica HOM05D005413 ORTHO05D006536 3.4e-26 124.0 143 53.1
CDE07G0886 Ceratophyllum demersum HOM05D005413 ORTHO05D006536 9.8e-26 122.5 163 46.6
SEGI_03865 Sequoiadendron giganteum HOM05D005413 ORTHO05D006536 9.8e-26 122.5 124 59.7
Lj3g0006130 Lotus japonicus HOM05D005413 ORTHO05D006536 1.3e-25 122.1 144 45.8
DCAR_018207 Daucus carota HOM05D005413 ORTHO05D006536 1.7e-25 121.7 144 48.6
Lj2C36T10 Lonicera japonica HOM05D005413 ORTHO05D006536 2.2e-25 121.3 210 37.1
Zm00001eb012330 Zea mays HOM05D005413 ORTHO05D006536 2.2e-25 121.3 143 49.0
Phvul.007G136700 Phaseolus vulgaris HOM05D005413 ORTHO05D006536 2.9e-25 120.9 108 59.3
vmacro14313 Vaccinium macrocarpon HOM05D005413 ORTHO05D006536 2.9e-25 120.9 195 41.0
arahy.Tifrunner.gnm1.ann1.0IPW5R Arachis hypogaea HOM05D005413 ORTHO05D006536 1.9e-24 118.2 99 64.6
arahy.Tifrunner.gnm1.ann1.BD57S3 Arachis hypogaea HOM05D005413 ORTHO05D006536 1.9e-24 118.2 99 64.6
Haze_03425 Corylus avellana HOM05D005413 ORTHO05D006536 4.1e-24 117.1 140 46.4
HanXRQChr05g0137071 Helianthus annuus HOM05D005413 ORTHO05D006536 4.1e-24 117.1 135 51.1
Lalb_Chr21g0312751 Lupinus albus HOM05D005413 ORTHO05D006536 7.1e-24 116.3 118 57.6
SGA_v2.0_scaffold22G09835 Striga asiatica HOM05D005413 ORTHO05D006536 7.1e-24 116.3 116 55.2
unitig_899.g15382 Utricularia gibba HOM05D005413 ORTHO05D006536 1.2e-23 115.5 134 48.5
EL10Ac6g13493 Beta vulgaris HOM05D005413 ORTHO05D006536 2.1e-23 114.8 139 47.5
Aqoxy1G00612 Aquilegia oxysepala HOM05D005413 ORTHO05D006536 2.7e-23 114.4 144 42.4
Psat7g200680 Pisum sativum HOM05D005413 ORTHO05D006536 3.5e-23 114.0 141 44.7
Ca_19483_v3 Cicer arietinum L. HOM05D005413 ORTHO05D006536 7.8e-23 112.8 136 43.4
SalBow6G6902 Salvia bowleyana HOM05D005413 ORTHO05D006536 1.7e-22 111.7 135 48.1
HPP92_015644 Vanilla planifolia HOM05D005413 ORTHO05D006536 1.7e-22 111.7 136 47.1
MD03G1159500 Malus domestica HOM05D005413 ORTHO05D006536 8.6e-22 109.4 144 43.1
Lalb_Chr03g0028501 Lupinus albus HOM05D005413 ORTHO05D006536 2.5e-21 107.8 144 44.4
SEGI_29962 Sequoiadendron giganteum HOM05D005852 ORTHO05D000002 7.3e-21 106.3 127 50.4
Dinv33562 Davidia involucrata HOM05D005413 ORTHO05D006536 9.5e-21 105.9 86 61.6
Thhalv10014324m.g Eutrema salsugineum HOM05D005413 ORTHO05D006536 4.7e-20 103.6 125 46.4
BcaC01g06609 Brassica carinata HOM05D005413 ORTHO05D006536 8.1e-20 102.8 149 42.3
BolC3t13687H Brassica oleracea HOM05D005413 ORTHO05D006536 8.1e-20 102.8 149 42.3
VMungo1127G2102 Vigna mungo HOM05D005413 ORTHO05D006536 1.4e-19 102.1 148 42.6
C03p12140 Brassica napus HOM05D005413 ORTHO05D006536 3.1e-19 100.9 149 41.6
Rhsim01G0199900 Rhododendron simsii HOM05D005413 ORTHO05D006536 4.0e-19 100.5 242 32.2
A03p10550 Brassica napus HOM05D005413 ORTHO05D006536 5.2e-19 100.1 149 41.6
BraA03t10367Z Brassica rapa HOM05D005413 ORTHO05D006536 5.2e-19 100.1 149 41.6
Sed0018758 Sechium edule HOM05D005413 ORTHO05D006536 8.9e-19 99.4 104 51.0
Oeu029208.1 Olea europaea HOM05D005413 ORTHO05D006536 2.0e-18 98.2 83 61.4
Phvul.011G100200 Phaseolus vulgaris HOM05D005413 ORTHO05D006536 7.6e-18 96.3 148 41.2
CARHR191490 Cardamine hirsuta HOM05D005413 ORTHO05D006536 1.3e-17 95.5 155 41.3
Sp6g23150 Schrenkiella parvula HOM05D005413 ORTHO05D006536 1.3e-17 95.5 115 45.2
Rhsim01G0199600 Rhododendron simsii HOM05D005413 ORTHO05D006536 1.4e-16 92.0 255 30.2
Glyma.12G095900 Glycine max HOM05D005413 ORTHO05D006536 7.1e-16 89.7 148 39.9
FAN21G0466 Fragaria x ananassa HOM05D005413 ORTHO05D006536 1.2e-15 89.0 150 37.3
AagrBONN_evm.TU.Sc2ySwM_344.2258 Anthoceros agrestis HOM05D004246 ORTHO05D005035 1.6e-15 88.6 158 38.6
Cpa.g.sc33.125 Carica papaya HOM05D005413 ORTHO05D006536 3.5e-15 87.4 83 56.6
Mapoly0068s0092 Marchantia polymorpha HOM05D005852 ORTHO05D006688 1.3e-14 85.5 114 46.5
Glyma.11G171773 Glycine max HOM05D005413 ORTHO05D006536 1.7e-14 85.1 132 40.9
vmacro21559 Vaccinium macrocarpon HOM05D003475 ORTHO05D004155 6.6e-14 83.2 212 35.4
PGR044G1324 Punica granatum HOM05D003044 ORTHO05D001869 3.3e-13 80.9 69 60.9
Aa31LG1G13390 Aethionema arabicum HOM05D005413 ORTHO05D006536 1.4e-11 75.5 127 37.8
AL6G33000 Arabidopsis lyrata HOM05D005413 ORTHO05D006536 2.4e-11 74.7 102 40.2
Carub.0006s1968 Capsella rubella HOM05D005413 ORTHO05D006536 4.0e-11 73.9 105 39.0
AT5G22040 Arabidopsis thaliana HOM05D005413 ORTHO05D006536 5.2e-11 73.6 102 39.2
vmacro05505 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 3.4e-10 70.9 176 35.8
BcaB01g04747 Brassica carinata HOM05D005413 ORTHO05D006536 9.9e-10 69.3 143 34.3
vmacro05561 Vaccinium macrocarpon HOM05D001266 ORTHO05D001105 1.3e-09 68.9 180 35.0
SMO236G0022 Selaginella moellendorffii HOM05D017472 ORTHO05D006688 1.7e-09 68.6 96 45.8
THA.LOC104815083 Tarenaya hassleriana HOM05D005413 ORTHO05D006536 2.9e-09 67.8 135 38.5
vmacro14864 Vaccinium macrocarpon HOM05D001069 ORTHO05D009886 8.4e-09 66.2 168 34.5
vmacro06545 Vaccinium macrocarpon HOM05D002963 ORTHO05D003302 1.9e-08 65.1 216 30.6
vmacro20798 Vaccinium macrocarpon HOM05D000051 ORTHO05D020337 3.2e-08 64.3 129 35.7
THA.LOC104810942 Tarenaya hassleriana HOM05D001091 ORTHO05D001020 4.2e-08 63.9 93 39.8
vmacro19208 Vaccinium macrocarpon HOM05D007305 ORTHO05D009886 9.3e-08 62.8 147 36.1
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 1.6e-07 62.0 187 32.6
vmacro08818 Vaccinium macrocarpon HOM05D004019 ORTHO05D005136 2.7e-07 61.2 95 41.1
vmacro22644 Vaccinium macrocarpon HOM05D000083 ORTHO05D001732 2.7e-07 61.2 89 42.7
vmacro04977 Vaccinium macrocarpon HOM05D004351 ORTHO05D005196 3.5e-07 60.8 228 30.7
vmacro12534 Vaccinium macrocarpon HOM05D000671 ORTHO05D004414 6.0e-07 60.1 89 43.8
vmacro13138 Vaccinium macrocarpon HOM05D001282 ORTHO05D009886 7.8e-07 59.7 170 35.3
vmacro00602 Vaccinium macrocarpon HOM05D007305 ORTHO05D009886 1.0e-06 59.3 128 34.4
BcaB05g22753 Brassica carinata HOM05D005413 ORTHO05D006536 1.3e-06 58.9 76 43.4
ATR0693G434 Amborella trichopoda HOM05D005852 ORTHO05D006688 2.3e-06 58.2 142 33.1
CBR_g31172 Chara braunii HOM05D005852 ORTHO05D006688 3.0e-06 57.8 76 47.4
vmacro10451 Vaccinium macrocarpon HOM05D007305 ORTHO05D009886 5.1e-06 57.0 95 42.1
vmacro13134 Vaccinium macrocarpon HOM05D004352 ORTHO05D000003 5.1e-06 57.0 127 35.4
vmacro07100 Vaccinium macrocarpon HOM05D001127 ORTHO05D002230 6.6e-06 56.6 174 31.6
Eucgr.G01582 Eucalyptus grandis HOM05D000002 ORTHO05D000047 8.7e-06 56.2 91 36.3
Eucgr.H03782 Eucalyptus grandis HOM05D000002 ORTHO05D000047 8.7e-06 56.2 91 36.3


User provided reference genes

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