Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07260 Vaccinium macrocarpon HOM05D005215 ORTHO05D006382 7.1e-124 447.2 214 100.0
Hma1.2p1_0756F.1_g213190 Hydrangea macrophylla HOM05D005215 ORTHO05D006382 1.6e-107 392.9 214 86.9
Actinidia34727 Actinidia chinensis HOM05D005215 ORTHO05D006382 4.6e-107 391.3 214 87.4
Dinv11822 Davidia involucrata HOM05D005215 ORTHO05D006382 7.9e-107 390.6 214 85.0
CSS0044679 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 8.7e-106 387.1 214 85.0
Cc02_g09580 Coffea canephora HOM05D005215 ORTHO05D006382 8.7e-106 387.1 206 86.9
CiPaw.13G040900 Carya illinoinensis HOM05D005215 ORTHO05D006382 4.3e-105 384.8 214 86.4
MBI01_g04055_MAGBIO Magnolia biondii HOM05D005215 ORTHO05D006382 9.6e-105 383.6 214 84.6
Actinidia18624 Actinidia chinensis HOM05D005215 ORTHO05D006382 1.6e-104 382.9 198 89.4
CSS0033765 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 2.1e-104 382.5 214 85.0
QL04p046761 Quercus lobata HOM05D005215 ORTHO05D006382 2.8e-104 382.1 213 84.0
PGR044G2198 Punica granatum HOM05D005215 ORTHO05D006382 4.8e-104 381.3 214 84.1
Atru.chr12.1046 Acer truncatum HOM05D005215 ORTHO05D006382 1.4e-103 379.8 214 83.2
CiPaw.14G033600 Carya illinoinensis HOM05D005215 ORTHO05D006382 1.4e-103 379.8 214 85.5
TPR.G2443 Trifolium pratense HOM05D005215 ORTHO05D006382 1.4e-103 379.8 211 84.4
TWI15G0816 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 1.4e-103 379.8 214 84.1
arahy.Tifrunner.gnm1.ann1.E5H8ET Arachis hypogaea HOM05D005215 ORTHO05D006382 1.8e-103 379.4 207 86.0
TAR369G1081 Trochodendron aralioides HOM05D005215 ORTHO05D006382 4.0e-103 378.3 214 82.2
Nitab4.5_0009484g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 9.0e-103 377.1 206 85.4
SalBow3G3150 Salvia bowleyana HOM05D005215 ORTHO05D006382 9.0e-103 377.1 207 86.0
EL10Ac4g07754 Beta vulgaris HOM05D005215 ORTHO05D006382 4.5e-102 374.8 212 83.0
ClCG08G008310 Citrullus lanatus HOM05D005215 ORTHO05D006382 5.8e-102 374.4 207 84.5
TAR623G0377 Trochodendron aralioides HOM05D005215 ORTHO05D006382 5.8e-102 374.4 214 81.8
Nn6g34863 Nelumbo nucifera HOM05D005215 ORTHO05D006382 7.6e-102 374.0 206 84.0
GSVIVG01010684001 Vitis vinifera HOM05D005215 ORTHO05D006382 7.6e-102 374.0 205 84.9
AUR62042083 Chenopodium quinoa HOM05D005215 ORTHO05D006382 1.0e-101 373.6 214 81.3
Ciclev10016681m.g Citrus clementina HOM05D005215 ORTHO05D006382 1.0e-101 373.6 214 81.8
Migut.F00868 Erythranthe guttata HOM05D005215 ORTHO05D006382 1.3e-101 373.2 214 83.2
Psat0s1904g0160 Pisum sativum HOM05D005215 ORTHO05D006382 1.3e-101 373.2 211 82.9
CAN.G1417.3 Capsicum annuum HOM05D005215 ORTHO05D006382 1.7e-101 372.9 206 84.0
Nitab4.5_0002586g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 2.2e-101 372.5 206 84.5
Medtr1g111860 Medicago truncatula HOM05D005215 ORTHO05D006382 3.8e-101 371.7 210 83.3
Thecc.10G114600 Theobroma cacao HOM05D005215 ORTHO05D006382 3.8e-101 371.7 214 83.6
Migut.C00229 Erythranthe guttata HOM05D005215 ORTHO05D006382 4.9e-101 371.3 214 82.7
MSTRG.27562 Avicennia marina HOM05D005215 ORTHO05D006382 6.5e-101 370.9 214 80.8
CDE06G1220 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 1.1e-100 370.2 206 82.0
Aqoxy4G02757 Aquilegia oxysepala HOM05D005215 ORTHO05D006382 1.4e-100 369.8 212 81.1
DCAR_006336 Daucus carota HOM05D005215 ORTHO05D006382 1.4e-100 369.8 205 83.9
Lsat_1_v5_gn_2_104201 Lactuca sativa HOM05D005215 ORTHO05D006382 1.4e-100 369.8 206 83.0
MD02G1262000 Malus domestica HOM05D005215 ORTHO05D006382 1.4e-100 369.8 211 79.1
Hund06789 Selenicereus undatus HOM05D005215 ORTHO05D006382 2.5e-100 369.0 214 79.9
Sc06g0002380 Simmondsia chinensis HOM05D005215 ORTHO05D006382 2.5e-100 369.0 207 82.6
Solyc11g006770.3 Solanum lycopersicum HOM05D005215 ORTHO05D006382 2.5e-100 369.0 206 84.0
Sopen11g002700 Solanum pennellii HOM05D005215 ORTHO05D006382 2.5e-100 369.0 206 84.0
PGSC0003DMG400023967 Solanum tuberosum HOM05D005215 ORTHO05D006382 2.5e-100 369.0 206 84.0
Migut.B01734 Erythranthe guttata HOM05D005215 ORTHO05D006382 4.2e-100 368.2 214 81.8
Peaxi162Scf00125g00233 Petunia axillaris HOM05D005215 ORTHO05D006382 5.5e-100 367.9 206 84.0
Sed0008445 Sechium edule HOM05D005215 ORTHO05D006382 1.2e-99 366.7 206 83.0
Manes.18G138580 Manihot esculenta HOM05D005215 ORTHO05D006382 2.1e-99 365.9 214 81.8
Prupe.2G069900 Prunus persica HOM05D005215 ORTHO05D006382 2.1e-99 365.9 214 79.9
SGA_v2.0_scaffold329G48861 Striga asiatica HOM05D005215 ORTHO05D006382 2.1e-99 365.9 206 82.5
arahy.Tifrunner.gnm1.ann1.KL5LPC Arachis hypogaea HOM05D005215 ORTHO05D006382 2.7e-99 365.5 230 77.0
Gorai.009G303500 Gossypium raimondii HOM05D005215 ORTHO05D006382 3.5e-99 365.2 214 82.2
Duzib114G0243 Durio zibethinus HOM05D005215 ORTHO05D006382 6.0e-99 364.4 214 82.7
ECA232G3141 Erigeron canadensis HOM05D005215 ORTHO05D006382 7.9e-99 364.0 206 81.1
HanXRQChr11g0321671 Helianthus annuus HOM05D005215 ORTHO05D006382 7.9e-99 364.0 206 81.6
Lsat_1_v5_gn_0_8140 Lactuca sativa HOM05D005215 ORTHO05D006382 7.9e-99 364.0 206 82.0
CDE08G0922 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 1.0e-98 363.6 206 80.1
Gohir.D05G288400 Gossypium hirsutum HOM05D005215 ORTHO05D006382 1.3e-98 363.2 214 81.8
TWI63G0161 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 1.3e-98 363.2 206 81.6
MD07G1058400 Malus domestica HOM05D005215 ORTHO05D006382 1.8e-98 362.8 211 78.7
Gohir.A05G287300 Gossypium hirsutum HOM05D005215 ORTHO05D006382 2.3e-98 362.5 214 81.8
Potri.010G240000 Populus trichocarpa HOM05D005215 ORTHO05D006382 3.0e-98 362.1 214 80.4
HPP92_020962 Vanilla planifolia HOM05D005215 ORTHO05D006382 6.7e-98 360.9 211 77.7
CANSAT56G3442 Cannabis sativa HOM05D005215 ORTHO05D006382 3.3e-97 358.6 214 79.0
Lj5g0024589 Lotus japonicus HOM05D005215 ORTHO05D006382 3.3e-97 358.6 207 80.2
Sed0014754 Sechium edule HOM05D005215 ORTHO05D006382 4.3e-97 358.2 206 80.6
AL4G36010 Arabidopsis lyrata HOM05D005215 ORTHO05D006382 5.7e-97 357.8 211 77.7
HanXRQChr07g0194041 Helianthus annuus HOM05D005215 ORTHO05D006382 7.4e-97 357.5 206 78.6
ATR0776G030 Amborella trichopoda HOM05D005215 ORTHO05D006382 2.1e-96 355.9 207 81.2
RcHm_v2.0_Chr7g0197741 Rosa chinensis HOM05D005215 ORTHO05D006382 2.8e-96 355.5 214 78.5
THA.LOC104801304 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 2.8e-96 355.5 211 79.6
PSO339G4522 Papaver somniferum HOM05D005215 ORTHO05D006382 3.7e-96 355.1 207 79.7
Sabra08G0012600 Salix brachista HOM05D005215 ORTHO05D006382 3.7e-96 355.1 214 79.4
CARHR133400 Cardamine hirsuta HOM05D005215 ORTHO05D006382 6.3e-96 354.4 212 76.9
C03p25540 Brassica napus HOM05D005215 ORTHO05D006382 1.1e-95 353.6 209 77.5
Sp4g21070 Schrenkiella parvula HOM05D005215 ORTHO05D006382 1.4e-95 353.2 211 76.8
Carub.0004s2071 Capsella rubella HOM05D005215 ORTHO05D006382 3.1e-95 352.1 211 75.8
BolC3t14941H Brassica oleracea HOM05D005215 ORTHO05D006382 4.1e-95 351.7 209 77.0
FvH4_5g02370 Fragaria vesca HOM05D005215 ORTHO05D006382 4.1e-95 351.7 214 77.6
FAN13G0513 Fragaria x ananassa HOM05D005215 ORTHO05D006382 4.1e-95 351.7 203 80.3
Potri.008G019200 Populus trichocarpa HOM05D005215 ORTHO05D006382 6.9e-95 350.9 214 77.1
A03p21550 Brassica napus HOM05D005215 ORTHO05D006382 9.0e-95 350.5 209 77.0
Cpa.g.sc704.2 Carica papaya HOM05D005215 ORTHO05D006382 9.0e-95 350.5 193 83.9
Glyma.20G074500 Glycine max HOM05D005215 ORTHO05D006382 9.0e-95 350.5 214 77.6
BcaC02g07452 Brassica carinata HOM05D005215 ORTHO05D006382 1.2e-94 350.1 210 75.7
BraA03t11391Z Brassica rapa HOM05D005215 ORTHO05D006382 1.2e-94 350.1 209 76.6
FAN18G1091 Fragaria x ananassa HOM05D005215 ORTHO05D006382 1.2e-94 350.1 214 77.1
AT2G38710 Arabidopsis thaliana HOM05D005215 ORTHO05D006382 1.5e-94 349.7 199 79.4
Eucgr.J00268 Eucalyptus grandis HOM05D005215 ORTHO05D006382 1.5e-94 349.7 214 78.0
PSO384G1677 Papaver somniferum HOM05D005215 ORTHO05D006382 2.6e-94 349.0 211 77.3
FAN04G2904 Fragaria x ananassa HOM05D005215 ORTHO05D006382 3.4e-94 348.6 203 79.8
BraA04t18418Z Brassica rapa HOM05D005215 ORTHO05D006382 4.5e-94 348.2 210 75.7
THA.LOC104811337 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 4.5e-94 348.2 211 77.3
C04p66830 Brassica napus HOM05D005215 ORTHO05D006382 5.9e-94 347.8 210 75.7
Glyma.10G123100 Glycine max HOM05D005215 ORTHO05D006382 5.9e-94 347.8 214 76.6
BolC4t28184H Brassica oleracea HOM05D005215 ORTHO05D006382 7.6e-94 347.4 210 75.7
Thhalv10017213m.g Eutrema salsugineum HOM05D005215 ORTHO05D006382 1.7e-93 346.3 209 76.1
Oeu030225.2 Olea europaea HOM05D005215 ORTHO05D006382 2.2e-93 345.9 215 79.1
Os10g0573100 Oryza sativa ssp. japonica HOM05D005215 ORTHO05D006382 2.2e-93 345.9 207 75.8
Aa31LG5G21000 Aethionema arabicum HOM05D005215 ORTHO05D006382 3.8e-93 345.1 212 75.0
AUR62041518 Chenopodium quinoa HOM05D005215 ORTHO05D006382 3.8e-93 345.1 234 70.9
VMungo0720G2906 Vigna mungo HOM05D005215 ORTHO05D006382 3.8e-93 345.1 214 75.7
Phvul.007G235600 Phaseolus vulgaris HOM05D005215 ORTHO05D006382 6.5e-93 344.4 211 75.4
Haze_03299 Corylus avellana HOM05D005215 ORTHO05D006382 1.9e-92 342.8 254 70.1
Zm00001eb390460 Zea mays HOM05D005215 ORTHO05D006382 5.5e-92 341.3 207 76.3
SEGI_01358 Sequoiadendron giganteum HOM05D005215 ORTHO05D006382 2.7e-91 339.0 204 77.9
PSO339G6572 Papaver somniferum HOM05D005215 ORTHO05D006382 4.3e-89 331.6 208 73.6
PSO801G0072 Papaver somniferum HOM05D005215 ORTHO05D006382 7.4e-89 330.9 208 73.6
Pp3c3_21710 Physcomitrium patens HOM05D005215 ORTHO05D006382 2.8e-88 328.9 202 73.8
SMO331G0011 Selaginella moellendorffii HOM05D005215 ORTHO05D006382 6.3e-88 327.8 202 74.8
Oeu026607.3 Olea europaea HOM05D005215 ORTHO05D006382 1.8e-87 326.2 293 58.7
Mapoly0059s0056 Marchantia polymorpha HOM05D005215 ORTHO05D006382 4.1e-87 325.1 205 72.7
Ah.11g047220 Amaranthus hybridus HOM05D005215 ORTHO05D006382 1.2e-86 323.6 207 74.4
AagrBONN_evm.TU.Sc2ySwM_117.3510 Anthoceros agrestis HOM05D005215 ORTHO05D006382 1.7e-85 319.7 202 70.8
Lj3A925G70 Lonicera japonica HOM05D005215 ORTHO05D006382 1.7e-85 319.7 179 86.6
Dinv10934 Davidia involucrata HOM05D005215 ORTHO05D006382 4.2e-84 315.1 166 86.7
FAN08G2650 Fragaria x ananassa HOM05D005215 ORTHO05D006382 3.9e-82 308.5 204 72.5
MELO3C019899.2 Cucumis melo HOM05D005215 ORTHO05D006382 7.4e-81 304.3 172 84.3
COL.COLO4_05151 Corchorus olitorius HOM05D005215 ORTHO05D006382 1.7e-72 276.6 428 41.6
Lalb_Chr02g0146211 Lupinus albus HOM05D005215 ORTHO05D006382 2.9e-69 265.8 145 83.4
Lalb_Chr06g0166341 Lupinus albus HOM05D005215 ORTHO05D006382 3.8e-69 265.4 145 83.4
Nn2g14190 Nelumbo nucifera HOM05D005215 ORTHO05D006382 4.0e-66 255.4 204 61.8
A04p29510 Brassica napus HOM05D005215 ORTHO05D006382 3.7e-64 248.8 145 76.6
Pp3c4_19060 Physcomitrium patens HOM05D005215 ORTHO05D006382 4.8e-64 248.4 172 68.6
CBR_g39962 Chara braunii HOM05D005215 ORTHO05D006382 1.5e-52 210.3 140 70.0
CsaV3_6G004280 Cucumis sativus L. HOM05D005215 ORTHO05D006382 5.5e-52 208.4 113 84.1
Cre03.g146687 Chlamydomonas reinhardtii HOM05D005215 ORTHO05D006382 3.7e-48 195.7 191 49.2
Ca_25655_v3 Cicer arietinum L. HOM05D000113 ORTHO05D001798 2.4e-47 193.0 125 74.4
Haze_26289 Corylus avellana HOM05D005215 ORTHO05D006382 3.5e-46 189.1 194 49.5
Potri.008G019325 Populus trichocarpa HOM05D005215 ORTHO05D006382 4.3e-44 182.2 109 80.7
unitig_88.g27810 Utricularia gibba HOM05D005215 ORTHO05D006382 1.2e-38 164.1 88 83.0
MCO01G395 Micromonas commoda HOM05D005215 ORTHO05D006382 3.5e-38 162.5 195 43.1
Sc06g0000010 Simmondsia chinensis HOM05D005215 ORTHO05D006382 1.3e-37 160.6 95 81.1
PRCOL_00005793 Prasinoderma coloniale HOM05D005215 ORTHO05D006382 6.6e-37 158.3 143 55.2
BcaNung04832 Brassica carinata HOM05D005215 ORTHO05D006382 9.5e-36 154.5 100 73.0
Dinv02216 Davidia involucrata HOM05D005215 ORTHO05D006382 8.9e-34 147.9 74 89.2
Cfa010328 Carpinus fangiana HOM05D005215 ORTHO05D006382 8.3e-32 141.4 115 65.2
unitig_88.g27811 Utricularia gibba HOM05D005215 ORTHO05D006382 4.6e-22 109.0 70 75.7
Lalb_Chr06g0166351 Lupinus albus HOM05D005215 ORTHO05D006382 8.6e-21 104.8 72 70.8
Sabra16G0322800 Salix brachista HOM05D005215 ORTHO05D006382 2.1e-19 100.1 72 68.1
Actinidia27053 Actinidia chinensis HOM05D005215 ORTHO05D006382 2.8e-19 99.8 60 83.3
Lalb_Chr02g0146221 Lupinus albus HOM05D005215 ORTHO05D006382 6.8e-18 95.1 62 74.2
GSVIVG01037606001 Vitis vinifera HOM05D005215 ORTHO05D014194 1.1e-10 71.2 35 82.9
Peaxi162Scf00959g00417 Petunia axillaris HOM05D005215 ORTHO05D306904 3.1e-10 69.7 59 67.8
Peaxi162Scf00959g00416 Petunia axillaris HOM05D005215 ORTHO05D006382 4.0e-10 69.3 40 82.5
Migut.F00867 Erythranthe guttata HOM05D012249 ORTHO05D014194 1.2e-09 67.8 35 82.9
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 2.2e-08 63.5 32 87.5


User provided reference genes

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