Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07227 Vaccinium macrocarpon HOM05D005926 ORTHO05D007001 0.0e+00 1417.1 738 100.0
Rhsim03G0105700 Rhododendron simsii HOM05D005926 ORTHO05D007001 1.9e-277 959.1 739 73.3
CSS0031564 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 4.6e-162 575.9 707 55.0
CSS0031315 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 2.5e-160 570.1 684 55.4
Actinidia18581 Actinidia chinensis HOM05D005926 ORTHO05D007001 1.2e-159 567.8 698 53.4
Dinv30648 Davidia involucrata HOM05D005926 ORTHO05D007001 5.6e-152 542.3 783 49.3
CSS0037332 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 9.9e-149 531.6 751 49.9
CSS0015422 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 7.6e-141 505.4 742 49.3
Actinidia28534 Actinidia chinensis HOM05D005926 ORTHO05D007001 2.7e-130 470.3 752 45.1
Ciclev10030805m.g Citrus clementina HOM05D005926 ORTHO05D007001 7.9e-114 415.6 646 46.6
QL04p042256 Quercus lobata HOM05D005926 ORTHO05D007001 1.3e-113 414.8 705 44.0
Lj2C28T9 Lonicera japonica HOM05D005926 ORTHO05D007001 5.5e-107 392.9 603 47.4
GSVIVG01034734001 Vitis vinifera HOM05D005926 ORTHO05D007001 5.5e-107 392.9 744 41.0
Manes.07G090100 Manihot esculenta HOM05D005926 ORTHO05D007001 3.1e-102 377.1 712 42.8
TAR623G1319 Trochodendron aralioides HOM05D005926 ORTHO05D007001 5.3e-102 376.3 719 42.4
COL.COLO4_06813 Corchorus olitorius HOM05D005926 ORTHO05D007001 7.6e-101 372.5 700 42.0
FvH4_7g05860 Fragaria vesca HOM05D005926 ORTHO05D007001 2.9e-100 370.5 575 47.5
RcHm_v2.0_Chr1g0333121 Rosa chinensis HOM05D005926 ORTHO05D007001 6.5e-100 369.4 575 47.0
Atru.chr12.975 Acer truncatum HOM05D005926 ORTHO05D007001 1.1e-99 368.6 702 41.9
FAN10G2760 Fragaria x ananassa HOM05D005926 ORTHO05D007001 1.1e-99 368.6 575 47.3
Duzib128G1763 Durio zibethinus HOM05D005926 ORTHO05D007001 1.4e-97 361.7 717 41.8
FAN03G1852 Fragaria x ananassa HOM05D005926 ORTHO05D007001 1.1e-96 358.6 575 46.3
Duzib106G0448 Durio zibethinus HOM05D005926 ORTHO05D007001 7.4e-96 355.9 710 40.8
Prupe.2G085400 Prunus persica HOM05D005926 ORTHO05D007001 1.3e-95 355.1 555 47.9
MD02G1248000 Malus domestica HOM05D005926 ORTHO05D007001 1.1e-94 352.1 595 44.4
Thecc.10G111000 Theobroma cacao HOM05D005926 ORTHO05D007001 4.1e-94 350.1 726 40.6
CiPaw.14G029200 Carya illinoinensis HOM05D005926 ORTHO05D007001 5.3e-94 349.7 751 39.4
Hma1.2p1_0010F.1_g007030 Hydrangea macrophylla HOM05D005926 ORTHO05D007001 2.6e-93 347.4 463 51.2
CsaV3_6G004110 Cucumis sativus L. HOM05D005926 ORTHO05D007001 5.1e-89 333.2 700 39.6
ClCG08G008140 Citrullus lanatus HOM05D005926 ORTHO05D007001 6.7e-89 332.8 701 39.7
MD07G1068100 Malus domestica HOM05D005926 ORTHO05D007001 2.6e-88 330.9 587 45.3
Gohir.A05G398500 Gossypium hirsutum HOM05D005926 ORTHO05D007001 3.3e-88 330.5 804 37.1
CANSAT56G4130 Cannabis sativa HOM05D005926 ORTHO05D007001 1.3e-87 328.6 684 40.2
Cc02_g10060 Coffea canephora HOM05D005926 ORTHO05D007001 2.2e-87 327.8 694 38.9
TAR369G1114 Trochodendron aralioides HOM05D005926 ORTHO05D007001 1.1e-86 325.5 789 37.3
TAR636G3019 Trochodendron aralioides HOM05D005926 ORTHO05D007001 1.4e-86 325.1 640 42.2
Potri.008G025000 Populus trichocarpa HOM05D005926 ORTHO05D007001 1.8e-86 324.7 710 38.9
Gorai.012G020100 Gossypium raimondii HOM05D005926 ORTHO05D007001 4.1e-86 323.6 809 36.8
Gohir.D04G017400 Gossypium hirsutum HOM05D005926 ORTHO05D007001 9.1e-86 322.4 758 37.6
MELO3C019887.2 Cucumis melo HOM05D005926 ORTHO05D007001 1.2e-85 322.0 720 38.8
TWI63G0673 Tripterygium wilfordii HOM05D005926 ORTHO05D007001 4.5e-85 320.1 696 39.1
Nn6g35019 Nelumbo nucifera HOM05D005926 ORTHO05D007001 1.1e-83 315.5 650 40.6
Glyma.20G187800 Glycine max HOM05D005926 ORTHO05D007001 1.4e-83 315.1 651 39.3
Nn2g14047 Nelumbo nucifera HOM05D005926 ORTHO05D007001 1.4e-83 315.1 642 39.7
Cpa.g.sc19.23 Carica papaya HOM05D005926 ORTHO05D007001 7.2e-83 312.8 877 34.7
Eucgr.G02709 Eucalyptus grandis HOM05D005926 ORTHO05D007001 2.7e-82 310.8 575 42.3
Peaxi162Scf00004g00119 Petunia axillaris HOM05D005926 ORTHO05D007001 1.0e-81 308.9 695 40.3
SalBow6G1645 Salvia bowleyana HOM05D005926 ORTHO05D007001 1.0e-81 308.9 696 37.8
Nitab4.5_0001027g0040 Nicotiana tabacum HOM05D005926 ORTHO05D007001 2.3e-81 307.8 753 37.1
Nitab4.5_0002878g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 4.4e-80 303.5 672 38.1
Sabra10G0182600 Salix brachista HOM05D005926 ORTHO05D007001 3.7e-79 300.4 789 35.2
Glyma.10G202600 Glycine max HOM05D005926 ORTHO05D007001 1.1e-78 298.9 685 36.8
Phvul.007G104500 Phaseolus vulgaris HOM05D005926 ORTHO05D007001 1.4e-78 298.5 694 37.2
Nitab4.5_0003396g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 2.0e-77 294.7 619 40.1
Sabra08G0016800 Salix brachista HOM05D005926 ORTHO05D007001 2.0e-77 294.7 700 37.6
Lj5g0002236 Lotus japonicus HOM05D005926 ORTHO05D007001 5.9e-77 293.1 680 38.1
PGSC0003DMG400023487 Solanum tuberosum HOM05D005926 ORTHO05D007001 1.0e-76 292.4 695 38.1
CAN.G1550.12 Capsicum annuum HOM05D005926 ORTHO05D007001 3.2e-75 287.3 552 42.0
Sopen05g033810 Solanum pennellii HOM05D005926 ORTHO05D007001 5.5e-75 286.6 697 37.0
PGR142G4330 Punica granatum HOM05D005926 ORTHO05D007001 2.1e-74 284.6 591 40.1
Lalb_Chr03g0036371 Lupinus albus HOM05D005926 ORTHO05D007001 8.0e-74 282.7 678 38.8
arahy.Tifrunner.gnm1.ann1.J9ASUV Arachis hypogaea HOM05D005926 ORTHO05D007001 1.0e-73 282.3 588 38.8
Psat6g176680 Pisum sativum HOM05D005926 ORTHO05D007001 1.4e-73 282.0 586 39.1
Nitab4.5_0012334g0010 Nicotiana tabacum HOM05D005926 ORTHO05D007001 4.0e-73 280.4 641 38.2
Sc06g0002210 Simmondsia chinensis HOM05D005926 ORTHO05D007001 1.2e-72 278.9 687 39.3
Sed0009709 Sechium edule HOM05D005926 ORTHO05D007001 4.4e-72 276.9 681 36.7
Haze_02593 Corylus avellana HOM05D005926 ORTHO05D007001 9.7e-72 275.8 299 57.5
Ca_10497_v3 Cicer arietinum L. HOM05D005926 ORTHO05D007001 1.7e-71 275.0 676 38.3
Migut.F00893 Erythranthe guttata HOM05D005926 ORTHO05D007001 2.4e-70 271.2 534 42.7
TPR.G2562 Trifolium pratense HOM05D005926 ORTHO05D007001 2.4e-70 271.2 649 37.9
DCAR_014349 Daucus carota HOM05D005926 ORTHO05D007001 1.2e-69 268.9 647 37.4
Medtr1g492840 Medicago truncatula HOM05D005926 ORTHO05D007001 5.0e-68 263.5 672 36.2
Solyc05g055360.4 Solanum lycopersicum HOM05D005926 ORTHO05D007001 1.5e-67 261.9 688 36.5
Aqoxy4G02869 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 9.4e-67 259.2 708 34.5
SGA_v2.0_scaffold62G21348 Striga asiatica HOM05D005926 ORTHO05D007001 1.4e-65 255.4 590 38.1
PGSC0003DMG400027309 Solanum tuberosum HOM05D005926 ORTHO05D007001 4.0e-65 253.8 645 36.9
AUR62041545 Chenopodium quinoa HOM05D005926 ORTHO05D007001 5.2e-65 253.4 606 36.6
Sed0000046 Sechium edule HOM05D005926 ORTHO05D007001 9.8e-64 249.2 637 35.9
Solyc11g007510.2 Solanum lycopersicum HOM05D005926 ORTHO05D007001 2.2e-63 248.1 504 39.9
Aqoxy2G01361 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 1.1e-62 245.7 556 38.5
Sopen11g003350 Solanum pennellii HOM05D005926 ORTHO05D007001 1.2e-61 242.3 503 39.8
ECA232G4290 Erigeron canadensis HOM05D005926 ORTHO05D007001 4.5e-61 240.4 578 37.0
HanXRQChr05g0147041 Helianthus annuus HOM05D005926 ORTHO05D007001 5.9e-61 240.0 522 38.1
VMungo0720G0267 Vigna mungo HOM05D005926 ORTHO05D007001 6.6e-60 236.5 642 34.6
Ah.04g163700 Amaranthus hybridus HOM05D005926 ORTHO05D007001 4.2e-59 233.8 607 36.7
EL10Ac4g08669 Beta vulgaris HOM05D005926 ORTHO05D007001 4.7e-58 230.3 639 35.2
Dinv20819 Davidia involucrata HOM05D005926 ORTHO05D007001 2.0e-56 224.9 337 46.9
Lsat_1_v5_gn_6_90261 Lactuca sativa HOM05D005926 ORTHO05D007001 8.3e-55 219.5 584 37.3
THA.LOC104814724 Tarenaya hassleriana HOM05D005926 ORTHO05D007001 1.7e-52 211.8 733 32.6
arahy.Tifrunner.gnm1.ann1.9BC44J Arachis hypogaea HOM05D005926 ORTHO05D007001 9.5e-51 206.1 536 35.1
PSO384G0761 Papaver somniferum HOM05D005926 ORTHO05D007001 1.2e-50 205.7 542 36.9
Thhalv10010215m.g Eutrema salsugineum HOM05D005926 ORTHO05D007001 8.0e-50 203.0 563 34.8
PSO339G4155 Papaver somniferum HOM05D005926 ORTHO05D007001 4.4e-48 197.2 536 36.8
PSO443G0029 Papaver somniferum HOM05D005926 ORTHO05D007001 3.7e-47 194.1 414 39.4
CARHR161990 Cardamine hirsuta HOM05D005926 ORTHO05D007001 1.9e-46 191.8 551 33.6
AT3G52240 Arabidopsis thaliana HOM05D005926 ORTHO05D007001 2.7e-45 188.0 701 31.1
Carub.0005s1860 Capsella rubella HOM05D005926 ORTHO05D007001 2.7e-45 188.0 679 32.1
BcaB02g08582 Brassica carinata HOM05D005926 ORTHO05D007001 1.7e-44 185.3 571 32.2
AL5G32830 Arabidopsis lyrata HOM05D005926 ORTHO05D007001 4.3e-43 180.6 644 31.1
Aa31LG10G7340 Aethionema arabicum HOM05D005926 ORTHO05D007001 1.4e-41 175.6 701 30.1
BraA09t39993Z Brassica rapa HOM05D005926 ORTHO05D007001 1.4e-41 175.6 651 30.6
Sp5g10020 Schrenkiella parvula HOM05D005926 ORTHO05D007001 6.8e-41 173.3 627 29.7
C08p27480 Brassica napus HOM05D005926 ORTHO05D007001 3.4e-40 171.0 653 30.5
BolC8t50365H Brassica oleracea HOM05D005926 ORTHO05D007001 3.4e-40 171.0 653 30.5
A09p45300 Brassica napus HOM05D005926 ORTHO05D007001 5.8e-40 170.2 650 30.2
BcaC02g09269 Brassica carinata HOM05D005926 ORTHO05D007001 1.1e-38 166.0 556 31.5
BolC4t25653H Brassica oleracea HOM05D005926 ORTHO05D007001 1.1e-38 166.0 576 31.2
C04p40700 Brassica napus HOM05D005926 ORTHO05D007001 1.4e-38 165.6 559 31.1
BraA04t16409Z Brassica rapa HOM05D005926 ORTHO05D007001 7.0e-38 163.3 574 32.6
A04p07120 Brassica napus HOM05D005926 ORTHO05D007001 4.6e-37 160.6 572 31.8
CDE04G2986 Ceratophyllum demersum HOM05D005926 ORTHO05D007001 1.0e-36 159.5 555 31.5
BcaC07g39594 Brassica carinata HOM05D005926 ORTHO05D007001 9.5e-35 152.9 637 29.7
Os05g0445800 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 3.7e-31 141.0 328 36.6
ATR0820G003 Amborella trichopoda HOM05D005926 ORTHO05D007001 6.2e-26 123.6 586 29.9
GSVIVG01031385001 Vitis vinifera HOM05D005926 ORTHO05D007001 8.1e-26 123.2 499 31.3
Os05g0446500 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 4.0e-25 120.9 329 33.7
unitig_0.g760 Utricularia gibba HOM05D005926 ORTHO05D007001 8.9e-25 119.8 593 29.0
HPP92_002057 Vanilla planifolia HOM05D005926 ORTHO05D007001 3.8e-23 114.4 198 43.9
Zm00001eb289020 Zea mays HOM05D005926 ORTHO05D007001 6.4e-23 113.6 375 32.0
Zm00001eb147390 Zea mays HOM05D005926 ORTHO05D007001 4.2e-22 110.9 468 30.3
Haze_02594 Corylus avellana HOM05D005926 ORTHO05D007001 7.8e-21 106.7 433 31.4
SEGI_23583 Sequoiadendron giganteum HOM05D005926 ORTHO05D007001 1.0e-20 106.3 352 30.7
arahy.Tifrunner.gnm1.ann1.UA3HQT Arachis hypogaea HOM05D005926 ORTHO05D007001 1.5e-19 102.4 376 32.2
arahy.Tifrunner.gnm1.ann1.L8M84U Arachis hypogaea HOM05D005926 ORTHO05D007001 7.3e-19 100.1 376 31.9
Os04g0646050 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 1.3e-15 89.4 133 43.6
Oeu026567.1 Olea europaea HOM05D005926 ORTHO05D007001 1.2e-13 82.8 413 29.8
Actinidia31091 Actinidia chinensis HOM05D005926 ORTHO05D007001 1.2e-08 66.2 55 61.8
AagrBONN_evm.TU.Sc2ySwM_228.4811 Anthoceros agrestis HOM05D005926 ORTHO05D007001 1.4e-06 59.3 419 26.7
Pp3c6_4890 Physcomitrium patens HOM05D031130 ORTHO05D019295 5.4e-06 57.4 126 38.9


User provided reference genes

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