Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07191 Vaccinium macrocarpon HOM05D015182 ORTHO05D010968 3.6e-219 764.6 380 100.0
vmacro23372 Vaccinium macrocarpon HOM05D015182 ORTHO05D010968 6.7e-218 760.4 380 99.5
vmacro10773 Vaccinium macrocarpon HOM05D015182 ORTHO05D000827 1.7e-152 543.1 481 64.2
vmacro21216 Vaccinium macrocarpon HOM05D015182 ORTHO05D000827 2.2e-91 340.1 484 48.1
vmacro16092 Vaccinium macrocarpon HOM05D001028 ORTHO05D000827 4.4e-52 209.5 307 39.4
Rhsim08G0127600 Rhododendron simsii HOM05D009613 ORTHO05D012253 5.6e-39 166.0 250 39.6
Rhsim07G0153600 Rhododendron simsii HOM05D015182 ORTHO05D010968 6.0e-33 146.0 335 35.8
vmacro14269 Vaccinium macrocarpon HOM05D001028 ORTHO05D010968 2.5e-31 140.6 219 37.4
Rhsim08G0143400 Rhododendron simsii HOM05D002230 ORTHO05D010968 1.3e-30 138.3 110 58.2
QL09p053831 Quercus lobata HOM05D010068 ORTHO05D010968 2.8e-22 110.5 318 29.6
CSS0049128 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 2.9e-19 100.5 165 38.8
CSS0032941 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 3.8e-19 100.1 161 36.0
CSS0046904 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 3.8e-19 100.1 226 32.3
CSS0038202 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 4.9e-19 99.8 167 36.5
CSS0016209 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 8.4e-19 99.0 226 31.0
CSS0003496 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 1.1e-18 98.6 225 31.6
Rhsim03G0182200 Rhododendron simsii HOM05D015182 ORTHO05D010968 1.4e-18 98.2 113 45.1
CSS0021942 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 7.9e-17 92.4 161 36.0
CSS0037510 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 1.8e-16 91.3 222 31.1
CSS0037570 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 2.5e-15 87.4 226 29.2
CSS0049203 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 4.0e-13 80.1 169 34.3
Rhsim05G0131100 Rhododendron simsii HOM05D008917 ORTHO05D010968 1.2e-12 78.6 68 58.8
CSS0039917 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 5.8e-12 76.3 160 33.8
RhsimUnG0002500 Rhododendron simsii HOM05D015182 ORTHO05D010968 5.8e-12 76.3 78 48.7
CSS0027407 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 7.6e-12 75.9 148 35.8
Sopen08g015910 Solanum pennellii HOM05D000047 ORTHO05D000044 2.2e-11 74.3 294 25.5
Sopen01g015000 Solanum pennellii HOM05D008695 ORTHO05D001422 3.8e-11 73.6 294 25.5
Sopen03g011960 Solanum pennellii HOM05D008695 ORTHO05D001422 1.9e-10 71.2 294 25.5
TAR275G0001 Trochodendron aralioides HOM05D032489 ORTHO05D001786 2.5e-10 70.9 260 24.6
Sopen10g008400 Solanum pennellii HOM05D000047 ORTHO05D000044 4.2e-10 70.1 294 25.2
Sopen05g021760 Solanum pennellii HOM05D008695 ORTHO05D001422 7.1e-10 69.3 292 25.0
PGR044G2228 Punica granatum HOM05D013472 ORTHO05D015108 1.2e-09 68.6 293 24.9
vmacro12501 Vaccinium macrocarpon HOM05D001824 ORTHO05D010055 6.0e-09 66.2 179 26.3
EL10Ac9g22434 Beta vulgaris HOM05D056876 ORTHO05D010968 1.0e-08 65.5 253 21.7
PGR119G2091 Punica granatum HOM05D013472 ORTHO05D015108 3.0e-08 63.9 286 25.5
PGR142G2288 Punica granatum HOM05D013472 ORTHO05D015108 3.9e-08 63.5 292 25.0
Sopen01g017450 Solanum pennellii HOM05D002047 ORTHO05D001422 3.9e-08 63.5 234 24.4
PGR142G1294 Punica granatum HOM05D013472 ORTHO05D015108 8.7e-08 62.4 287 25.4
Dinv11092 Davidia involucrata HOM05D012821 ORTHO05D001422 1.5e-07 61.6 184 27.2
MBI12_g00600_MAGBIO Magnolia biondii HOM05D003711 ORTHO05D001786 4.3e-07 60.1 148 29.7
Nitab4.5_0003592g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.7e-07 59.7 121 33.1
Nitab4.5_0001116g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 9.6e-07 58.9 178 28.1
Sopen03g015690 Solanum pennellii HOM05D008695 ORTHO05D001422 9.6e-07 58.9 298 25.2
Rhsim05G0118800 Rhododendron simsii HOM05D009613 ORTHO05D012253 1.3e-06 58.5 42 57.1
PGR083G1646 Punica granatum HOM05D013472 ORTHO05D015108 1.6e-06 58.2 285 23.2
Sopen12g021750 Solanum pennellii HOM05D000047 ORTHO05D000044 1.6e-06 58.2 180 26.7
PGSC0003DMG400016492 Solanum tuberosum HOM05D002047 ORTHO05D001422 2.1e-06 57.8 227 24.7
Actinidia17705 Actinidia chinensis HOM05D044942 ORTHO05D010968 2.8e-06 57.4 76 39.5
Sopen09g022070 Solanum pennellii HOM05D000047 ORTHO05D001422 2.8e-06 57.4 183 26.8
Lj5A377T16 Lonicera japonica HOM05D015182 ORTHO05D010968 4.8e-06 56.6 240 25.0


User provided reference genes

Program Settings