Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07161 Vaccinium macrocarpon HOM05D002598 ORTHO05D023200 2.4e-79 298.9 164 100.0
Rhsim07G0129500 Rhododendron simsii HOM05D002598 ORTHO05D003130 3.7e-48 195.3 176 67.6
Actinidia02962 Actinidia chinensis HOM05D002598 ORTHO05D003130 1.7e-40 169.9 142 69.7
CSS0003608 Camellia sinensis var. sinensis HOM05D002598 ORTHO05D003130 2.9e-40 169.1 142 67.6
Dinv31352 Davidia involucrata HOM05D002598 ORTHO05D003130 3.3e-28 129.0 166 52.4
GSVIVG01016319001 Vitis vinifera HOM05D002598 ORTHO05D003130 3.1e-26 122.5 142 54.2
DCAR_006461 Daucus carota HOM05D002598 ORTHO05D003130 1.1e-23 114.0 142 55.6
Cc02_g11370 Coffea canephora HOM05D002598 ORTHO05D003130 1.4e-23 113.6 143 52.4
Hma1.2p1_0453F.1_g156031 Hydrangea macrophylla HOM05D002598 ORTHO05D003130 4.1e-23 112.1 142 52.1
Lsat_1_v5_gn_5_129941 Lactuca sativa HOM05D002598 ORTHO05D003130 4.1e-23 112.1 142 53.5
CiPaw.01G275800 Carya illinoinensis HOM05D002598 ORTHO05D003130 7.1e-23 111.3 142 50.7
MSTRG.27469 Avicennia marina HOM05D002598 ORTHO05D003130 1.6e-22 110.2 142 49.3
Solyc05g023710.3 Solanum lycopersicum HOM05D002598 ORTHO05D003130 1.7e-21 106.7 142 52.1
Thecc.10G069200 Theobroma cacao HOM05D002598 ORTHO05D003130 6.6e-21 104.8 146 49.3
TAR627G0637 Trochodendron aralioides HOM05D002598 ORTHO05D003130 1.1e-20 104.0 142 49.3
Sopen05g018320 Solanum pennellii HOM05D002598 ORTHO05D003130 1.5e-20 103.6 142 51.4
Lj2g0017300 Lotus japonicus HOM05D002598 ORTHO05D003130 2.5e-20 102.8 144 50.0
PGR142G4195 Punica granatum HOM05D002598 ORTHO05D003130 3.3e-20 102.4 143 48.3
TPR.G36621 Trifolium pratense HOM05D002598 ORTHO05D003130 3.3e-20 102.4 144 46.5
Glyma.17G186500 Glycine max HOM05D002598 ORTHO05D003130 2.1e-19 99.8 149 46.3
Manes.10G043700 Manihot esculenta HOM05D002598 ORTHO05D003130 2.1e-19 99.8 142 44.4
Duzib114G1037 Durio zibethinus HOM05D002598 ORTHO05D003130 3.6e-19 99.0 146 47.3
Peaxi162Scf00851g00425 Petunia axillaris HOM05D002598 ORTHO05D003130 3.6e-19 99.0 153 48.4
SGA_v2.0_scaffold62G21413 Striga asiatica HOM05D002598 ORTHO05D003130 4.7e-19 98.6 142 46.5
Gorai.008G083900 Gossypium raimondii HOM05D002598 ORTHO05D003130 6.2e-19 98.2 147 46.9
HanXRQChr14g0455921 Helianthus annuus HOM05D002598 ORTHO05D003130 6.2e-19 98.2 142 48.6
Gohir.A12G077000 Gossypium hirsutum HOM05D002598 ORTHO05D003130 8.1e-19 97.8 146 46.6
Aqoxy4G00069 Aquilegia oxysepala HOM05D002598 ORTHO05D003130 1.4e-18 97.1 144 44.4
COL.COLO4_07091 Corchorus olitorius HOM05D002598 ORTHO05D003130 1.8e-18 96.7 146 46.6
Psat1g099480 Pisum sativum HOM05D002598 ORTHO05D003130 1.8e-18 96.7 146 45.2
EL10Ac2g03569 Beta vulgaris HOM05D002598 ORTHO05D003130 4.0e-18 95.5 144 45.8
ECA234G4551 Erigeron canadensis HOM05D002598 ORTHO05D003130 4.0e-18 95.5 142 50.7
Lalb_Chr06g0176371 Lupinus albus HOM05D002598 ORTHO05D003130 4.0e-18 95.5 144 45.1
Prupe.2G217500 Prunus persica HOM05D002598 ORTHO05D003130 4.0e-18 95.5 146 45.2
Lj1C922T8 Lonicera japonica HOM05D002598 ORTHO05D003130 5.2e-18 95.1 143 43.4
Sed0003300 Sechium edule HOM05D002598 ORTHO05D003130 5.2e-18 95.1 142 43.0
Phvul.004G075200 Phaseolus vulgaris HOM05D002598 ORTHO05D003130 6.8e-18 94.7 144 45.8
SalBow4G1919 Salvia bowleyana HOM05D002598 ORTHO05D003130 6.8e-18 94.7 142 48.6
Sc20g0002140 Simmondsia chinensis HOM05D002598 ORTHO05D003130 6.8e-18 94.7 142 45.1
Cpa.g.sc53.27 Carica papaya HOM05D002598 ORTHO05D003130 8.9e-18 94.4 144 45.8
Gohir.D12G075200 Gossypium hirsutum HOM05D002598 ORTHO05D003130 8.9e-18 94.4 151 46.4
arahy.Tifrunner.gnm1.ann1.WNB9PN Arachis hypogaea HOM05D002598 ORTHO05D023200 1.2e-17 94.0 142 44.4
CAN.G254.9 Capsicum annuum HOM05D002598 ORTHO05D003130 2.0e-17 93.2 143 49.0
ClCG09G020470 Citrullus lanatus HOM05D002598 ORTHO05D003130 3.4e-17 92.4 145 41.4
Cfa001600 Carpinus fangiana HOM05D002598 ORTHO05D003130 7.6e-17 91.3 143 46.9
Eucgr.G02808 Eucalyptus grandis HOM05D002598 ORTHO05D003130 9.9e-17 90.9 143 45.5
Ciclev10030815m.g Citrus clementina HOM05D002598 ORTHO05D003130 4.9e-16 88.6 147 45.6
Lj1A920T52 Lonicera japonica HOM05D002598 ORTHO05D003130 4.9e-16 88.6 130 46.9
VMungo0464G1285 Vigna mungo HOM05D002598 ORTHO05D003130 4.9e-16 88.6 144 44.4
CsaV3_3G019010 Cucumis sativus L. HOM05D002598 ORTHO05D003130 8.4e-16 87.8 145 40.7
Potri.008G043400 Populus trichocarpa HOM05D002598 ORTHO05D003130 8.4e-16 87.8 142 43.7
AUR62027930 Chenopodium quinoa HOM05D002598 ORTHO05D003130 1.9e-15 86.7 142 42.3
MD01G1111800 Malus domestica HOM05D002598 ORTHO05D003130 2.4e-15 86.3 150 43.3
THA.LOC104826737 Tarenaya hassleriana HOM05D002598 ORTHO05D003130 2.4e-15 86.3 142 41.5
AUR62020774 Chenopodium quinoa HOM05D002598 ORTHO05D003130 4.2e-15 85.5 142 42.3
Hund22491 Selenicereus undatus HOM05D002598 ORTHO05D003130 7.1e-15 84.7 217 34.6
Sabra08G0030000 Salix brachista HOM05D002598 ORTHO05D003130 1.6e-14 83.6 142 42.3
Oeu037454.1 Olea europaea HOM05D002598 ORTHO05D003130 2.1e-14 83.2 106 50.9
Medtr6g033410 Medicago truncatula HOM05D002598 ORTHO05D003130 2.7e-14 82.8 144 43.8
Nn4g24880 Nelumbo nucifera HOM05D002598 ORTHO05D003130 4.6e-14 82.0 142 43.0
Ca_04677_v3 Cicer arietinum L. HOM05D002598 ORTHO05D003130 1.3e-13 80.5 148 42.6
TWI15G0990 Tripterygium wilfordii HOM05D002598 ORTHO05D003130 2.3e-13 79.7 142 42.3
MELO3C019491.2 Cucumis melo HOM05D002598 ORTHO05D003130 5.1e-13 78.6 145 37.9
ATR0763G043 Amborella trichopoda HOM05D002598 ORTHO05D003130 8.7e-13 77.8 151 40.4
FAN27G0297 Fragaria x ananassa HOM05D002598 ORTHO05D003130 1.5e-12 77.0 145 42.1
unitig_46.g18596 Utricularia gibba HOM05D002598 ORTHO05D003130 1.9e-12 76.6 141 41.8
QL08p056686 Quercus lobata HOM05D002598 ORTHO05D003130 7.3e-12 74.7 142 39.4
AL5G36660 Arabidopsis lyrata HOM05D002598 ORTHO05D003130 1.6e-11 73.6 148 39.9
Carub.0005s2223 Capsella rubella HOM05D002598 ORTHO05D003130 4.0e-10 68.9 147 41.5
MD07G1178300 Malus domestica HOM05D002598 ORTHO05D003130 5.2e-10 68.6 146 41.1
Sabra16G0323500 Salix brachista HOM05D002598 ORTHO05D023200 1.5e-09 67.0 127 39.4
Haze_16928 Corylus avellana HOM05D002598 ORTHO05D003130 2.0e-09 66.6 114 41.2
CARHR165560 Cardamine hirsuta HOM05D002598 ORTHO05D003130 5.8e-09 65.1 94 46.8
Sp5g06970 Schrenkiella parvula HOM05D002598 ORTHO05D003130 8.4e-08 61.2 144 36.8
arahy.Tifrunner.gnm1.ann1.H0Y7G8 Arachis hypogaea HOM05D002598 ORTHO05D023200 1.1e-07 60.8 102 38.2
MELO3C025507.2 Cucumis melo HOM05D002598 ORTHO05D003130 1.4e-07 60.5 93 43.0
FvH4_2g10660 Fragaria vesca HOM05D002598 ORTHO05D003130 3.2e-07 59.3 147 37.4
Os12g0163200 Oryza sativa ssp. japonica HOM05D002598 ORTHO05D003130 3.2e-07 59.3 155 34.8
Nitab4.5_0001053g0020 Nicotiana tabacum HOM05D002598 ORTHO05D003130 5.4e-07 58.5 95 43.2
PSO675G5612 Papaver somniferum HOM05D002598 ORTHO05D003130 5.4e-07 58.5 147 38.8
Atru.chr12.651 Acer truncatum HOM05D002598 ORTHO05D023200 7.1e-07 58.2 142 37.3
BcaC07g39875 Brassica carinata HOM05D002598 ORTHO05D003130 9.3e-07 57.8 150 38.0
C08p30800 Brassica napus HOM05D002598 ORTHO05D003130 9.3e-07 57.8 150 38.0
Aa31LG10G10530 Aethionema arabicum HOM05D002598 ORTHO05D003130 1.2e-06 57.4 95 44.2
FAN15G1309 Fragaria x ananassa HOM05D002598 ORTHO05D003130 1.2e-06 57.4 145 35.9
A09p48510 Brassica napus HOM05D002598 ORTHO05D003130 2.1e-06 56.6 147 35.4
BraA09t40303Z Brassica rapa HOM05D002598 ORTHO05D003130 2.1e-06 56.6 147 35.4
BcaB01g00088 Brassica carinata HOM05D002598 ORTHO05D003130 2.7e-06 56.2 145 39.3


User provided reference genes

Program Settings