Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07157 Vaccinium macrocarpon HOM05D006083 ORTHO05D007634 0.0e+00 4160.5 2121 100.0
Rhsim03G0132700 Rhododendron simsii HOM05D006083 ORTHO05D007634 0.0e+00 2659.0 2085 70.7
CSS0008531 Camellia sinensis var. sinensis HOM05D006083 ORTHO05D007634 0.0e+00 2047.3 2087 56.9
Actinidia02966 Actinidia chinensis HOM05D006083 ORTHO05D007634 0.0e+00 1969.5 2095 55.6
Dinv31433 Davidia involucrata HOM05D006083 ORTHO05D007634 0.0e+00 1625.9 2093 48.5
QL08p059019 Quercus lobata HOM05D006083 ORTHO05D007634 0.0e+00 1148.7 2124 38.1
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 0.0e+00 1143.6 2044 39.7
Cfa001507 Carpinus fangiana HOM05D006083 ORTHO05D007634 0.0e+00 1142.9 2037 37.9
Lj1A934T60 Lonicera japonica HOM05D006083 ORTHO05D007634 0.0e+00 1128.6 1659 43.0
Haze_17036 Corylus avellana HOM05D006083 ORTHO05D007634 0.0e+00 1126.7 2121 37.2
CiPaw.01G284100 Carya illinoinensis HOM05D006083 ORTHO05D007634 0.0e+00 1083.9 2101 36.8
Thecc.10G046700 Theobroma cacao HOM05D006083 ORTHO05D007634 2.7e-308 1063.1 2105 36.5
Potri.008G052500 Populus trichocarpa HOM05D006083 ORTHO05D007634 6.0e-308 1062.0 2098 36.8
Nn2g12936 Nelumbo nucifera HOM05D006083 ORTHO05D007634 6.7e-307 1058.5 2127 35.8
Prupe.2G231200 Prunus persica HOM05D006083 ORTHO05D007634 8.7e-307 1058.1 2085 36.4
GSVIVG01016589001 Vitis vinifera HOM05D006083 ORTHO05D007634 1.6e-305 1053.9 2116 35.8
Cc02_g08180 Coffea canephora HOM05D006083 ORTHO05D007634 1.1e-304 1051.2 2004 37.2
Manes.07G113300 Manihot esculenta HOM05D006083 ORTHO05D007634 6.9e-304 1048.5 2111 35.7
MD07G1193600 Malus domestica HOM05D006083 ORTHO05D007634 3.2e-301 1039.6 2128 36.6
Atru.chr12.505 Acer truncatum HOM05D006083 ORTHO05D007634 9.3e-301 1038.1 1912 37.4
Potri.010G208200 Populus trichocarpa HOM05D006083 ORTHO05D007634 6.2e-297 1025.4 2101 35.9
Sopen04g005570 Solanum pennellii HOM05D006083 ORTHO05D007634 5.8e-295 1018.8 2065 35.7
COL.COLO4_14970 Corchorus olitorius HOM05D006083 ORTHO05D007634 1.7e-294 1017.3 2091 35.8
CAN.G786.23 Capsicum annuum HOM05D006083 ORTHO05D007634 2.7e-292 1010.0 2077 35.7
TWI15G0674 Tripterygium wilfordii HOM05D006083 ORTHO05D007634 3.9e-291 1006.1 2118 35.8
Sabra08G0037800 Salix brachista HOM05D006083 ORTHO05D007634 9.7e-290 1001.5 2074 36.0
FAN06G5109 Fragaria x ananassa HOM05D006083 ORTHO05D007634 4.1e-288 996.1 2144 35.2
FAN06G0387 Fragaria x ananassa HOM05D006083 ORTHO05D007634 6.9e-288 995.3 2127 35.4
Solyc04g011380.4 Solanum lycopersicum HOM05D006083 ORTHO05D007634 9.0e-288 995.0 2142 35.1
FAN01G1089 Fragaria x ananassa HOM05D006083 ORTHO05D007634 4.5e-287 992.6 2127 35.1
FAN03G2083 Fragaria x ananassa HOM05D006083 ORTHO05D007634 4.5e-287 992.6 2127 35.0
TAR623G0128 Trochodendron aralioides HOM05D006083 ORTHO05D007634 4.5e-287 992.6 1997 35.9
DCAR_027665 Daucus carota HOM05D006083 ORTHO05D007634 1.9e-285 987.3 2150 35.3
Peaxi162Scf00060g00026 Petunia axillaris HOM05D006083 ORTHO05D007634 6.1e-284 982.2 1995 36.3
FvH4_7g21930 Fragaria vesca HOM05D006083 ORTHO05D007634 3.9e-283 979.5 2127 34.9
Gorai.012G069900 Gossypium raimondii HOM05D006083 ORTHO05D007634 1.4e-277 961.1 2095 35.3
Gohir.A05G349900 Gossypium hirsutum HOM05D006083 ORTHO05D007634 3.6e-276 956.4 2100 35.0
Gohir.D04G062600 Gossypium hirsutum HOM05D006083 ORTHO05D007634 3.9e-275 953.0 2090 35.2
CANSAT56G1432 Cannabis sativa HOM05D006083 ORTHO05D007634 7.2e-269 932.2 2083 33.9
Glyma.18G288300 Glycine max HOM05D006083 ORTHO05D007634 1.6e-260 904.4 2092 33.2
Duzib114G0803 Durio zibethinus HOM05D006083 ORTHO05D007634 9.1e-256 888.6 1710 36.4
arahy.Tifrunner.gnm1.ann1.ES2X5Y Arachis hypogaea HOM05D006083 ORTHO05D007634 5.9e-255 885.9 1990 32.8
arahy.Tifrunner.gnm1.ann1.V7LDKI Arachis hypogaea HOM05D006083 ORTHO05D007634 5.9e-255 885.9 1990 32.8
Hund12547 Selenicereus undatus HOM05D006083 ORTHO05D007634 5.5e-253 879.4 2111 32.7
Lj1g0008101 Lotus japonicus HOM05D006083 ORTHO05D007634 9.4e-253 878.6 2078 32.9
VMungo1383G1537 Vigna mungo HOM05D006083 ORTHO05D007634 1.1e-248 865.1 2091 33.0
MELO3C025449.2 Cucumis melo HOM05D006083 ORTHO05D007634 7.0e-248 862.4 2098 32.9
ClCG09G020050 Citrullus lanatus HOM05D006083 ORTHO05D007634 1.6e-247 861.3 2119 32.8
CsaV3_5G026410 Cucumis sativus L. HOM05D006083 ORTHO05D007634 3.8e-246 856.7 2077 33.1
EL10Ac2g03425 Beta vulgaris HOM05D006083 ORTHO05D007634 1.6e-244 851.3 2084 33.1
Ciclev10030497m.g Citrus clementina HOM05D006083 ORTHO05D007634 6.8e-243 845.9 2088 32.6
Oeu040905.3 Olea europaea HOM05D006083 ORTHO05D007634 2.0e-242 844.3 1574 36.8
MBI14_g18543_MAGBIO Magnolia biondii HOM05D006083 ORTHO05D007634 7.5e-242 842.4 2186 32.7
Eucgr.G02918 Eucalyptus grandis HOM05D006083 ORTHO05D007634 3.2e-240 837.0 2104 32.4
Aqoxy4G02985 Aquilegia oxysepala HOM05D006083 ORTHO05D007634 1.2e-239 835.1 2131 32.5
AUR62040954 Chenopodium quinoa HOM05D006083 ORTHO05D007634 2.3e-235 820.8 2083 32.8
Psat3g185080 Pisum sativum HOM05D006083 ORTHO05D007634 4.0e-235 820.1 2100 31.2
HanXRQChr09g0247731 Helianthus annuus HOM05D006083 ORTHO05D007634 4.9e-233 813.1 2077 32.7
PGR142G3850 Punica granatum HOM05D006083 ORTHO05D007634 1.4e-232 811.6 2116 31.8
Sed0020975 Sechium edule HOM05D006083 ORTHO05D007634 1.2e-231 808.5 2108 32.1
Sc06g0002680 Simmondsia chinensis HOM05D006083 ORTHO05D007634 1.6e-228 798.1 1570 35.7
PSO339G3664 Papaver somniferum HOM05D006083 ORTHO05D007634 2.1e-228 797.7 2130 31.7
PSO384G3245 Papaver somniferum HOM05D006083 ORTHO05D007634 2.3e-227 794.3 2132 31.6
Ca_07227_v3 Cicer arietinum L. HOM05D006083 ORTHO05D007634 2.6e-226 790.8 2094 30.4
Lalb_Chr10g0091771 Lupinus albus HOM05D006083 ORTHO05D007634 6.4e-225 786.2 1562 35.1
AUR62038373 Chenopodium quinoa HOM05D006083 ORTHO05D007634 3.2e-224 783.9 2027 32.4
Medtr7g024000 Medicago truncatula HOM05D006083 ORTHO05D007634 2.3e-222 777.7 2086 30.3
Lalb_Chr04g0257841 Lupinus albus HOM05D006083 ORTHO05D007634 1.2e-220 771.9 1570 34.1
Lsat_1_v5_gn_9_65161 Lactuca sativa HOM05D006083 ORTHO05D007634 1.3e-217 761.9 2082 32.0
Nitab4.5_0005525g0010 Nicotiana tabacum HOM05D006083 ORTHO05D007634 5.2e-211 740.0 2075 31.5
TPR.G15506 Trifolium pratense HOM05D006083 ORTHO05D007634 7.6e-210 736.1 1614 32.3
FAN10G0925 Fragaria x ananassa HOM05D006083 ORTHO05D007634 3.9e-206 723.8 1856 32.9
THA.LOC104810174 Tarenaya hassleriana HOM05D006083 ORTHO05D007634 5.1e-206 723.4 1970 31.2
Cpa.g.sc1.374 Carica papaya HOM05D006083 ORTHO05D007634 4.2e-184 650.6 722 48.9
Nitab4.5_0003969g0020 Nicotiana tabacum HOM05D006083 ORTHO05D007634 1.6e-183 648.7 1672 33.0
C04p67440 Brassica napus HOM05D006083 ORTHO05D007634 1.0e-182 646.0 2076 29.9
TAR369G0895 Trochodendron aralioides HOM05D006083 ORTHO05D007634 6.2e-180 636.7 980 39.6
BolC4t28242H Brassica oleracea HOM05D006083 ORTHO05D007634 4.1e-179 634.0 2077 29.7
A04p30380 Brassica napus HOM05D006083 ORTHO05D007634 1.5e-178 632.1 2062 29.8
RcHm_v2.0_Chr1g0366211 Rosa chinensis HOM05D006083 ORTHO05D007634 7.6e-178 629.8 692 50.1
CANSAT56G0880 Cannabis sativa HOM05D006083 ORTHO05D007634 1.0e-177 629.4 1077 36.7
Aa31LG5G20040 Aethionema arabicum HOM05D006083 ORTHO05D007634 3.8e-177 627.5 2099 29.4
CARHR134450 Cardamine hirsuta HOM05D006083 ORTHO05D007634 6.5e-177 626.7 2073 29.6
BraA04t18470Z Brassica rapa HOM05D006083 ORTHO05D007634 2.5e-176 624.8 2079 29.6
Phvul.008G013732 Phaseolus vulgaris HOM05D006083 ORTHO05D007634 3.2e-176 624.4 1178 34.0
Thhalv10016135m.g Eutrema salsugineum HOM05D006083 ORTHO05D007634 4.2e-176 624.0 2091 29.1
AT2G39580 Arabidopsis thaliana HOM05D006083 ORTHO05D007634 5.1e-174 617.1 2068 29.5
Carub.0004s2165 Capsella rubella HOM05D006083 ORTHO05D007634 1.5e-173 615.5 2075 29.4
Sp4g21870 Schrenkiella parvula HOM05D006083 ORTHO05D007634 3.7e-172 610.9 2088 28.8
AL4G36990 Arabidopsis lyrata HOM05D006083 ORTHO05D007634 6.3e-172 610.1 2070 30.0
ATR0559G184 Amborella trichopoda HOM05D006083 ORTHO05D007634 2.1e-159 568.5 2112 28.8
SHI22592 Sapria himalayana HOM05D006083 ORTHO05D007634 1.5e-157 562.4 2025 28.2
Ca_29789_v3 Cicer arietinum L. HOM05D006083 ORTHO05D007634 3.3e-157 561.2 721 41.9
Zm00001eb028750 Zea mays HOM05D006083 ORTHO05D007634 3.8e-137 494.6 1999 26.9
CDE05G2458 Ceratophyllum demersum HOM05D006083 ORTHO05D007634 1.5e-133 482.6 1582 27.2
RcHm_v2.0_Chr1g0366201 Rosa chinensis HOM05D006083 ORTHO05D007634 3.4e-133 481.5 1173 33.8
SEGI_22945 Sequoiadendron giganteum HOM05D006083 ORTHO05D007634 4.6e-114 417.9 747 34.9
FAN10G2882 Fragaria x ananassa HOM05D006083 ORTHO05D007634 2.0e-109 402.5 437 48.7
TAR369G0795 Trochodendron aralioides HOM05D006083 ORTHO05D007634 1.1e-107 396.7 839 37.1
Actinidia07719 Actinidia chinensis HOM05D001446 ORTHO05D001360 3.0e-97 362.1 733 36.6
Peaxi162Scf00060g00126 Petunia axillaris HOM05D006083 ORTHO05D007634 7.6e-93 347.4 921 30.6
HPP92_018996 Vanilla planifolia HOM05D006083 ORTHO05D007634 2.2e-84 319.3 539 37.5
SEGI_25206 Sequoiadendron giganteum HOM05D006083 ORTHO05D007634 2.4e-78 299.3 542 34.1
Os12g0566500 Oryza sativa ssp. japonica HOM05D006083 ORTHO05D007634 2.0e-77 296.2 456 37.1
Mapoly0075s0039 Marchantia polymorpha HOM05D006083 ORTHO05D007634 3.2e-67 262.3 732 29.0
Cpa.g.sc1.375 Carica papaya HOM05D006083 ORTHO05D007634 1.9e-64 253.1 631 33.4
BcaB06g29099 Brassica carinata HOM05D006083 ORTHO05D007634 5.1e-57 228.4 1554 24.9
AagrBONN_evm.TU.Sc2ySwM_228.2795 Anthoceros agrestis HOM05D000140 ORTHO05D007634 4.5e-53 215.3 722 28.3
Hund24433 Selenicereus undatus HOM05D006083 ORTHO05D007634 2.9e-52 212.6 769 29.1
Pp3c6_12750 Physcomitrium patens HOM05D006083 ORTHO05D007634 1.4e-49 203.8 699 26.5
Phvul.008G013666 Phaseolus vulgaris HOM05D006083 ORTHO05D007634 3.3e-48 199.1 710 31.7
SMO367G1201 Selaginella moellendorffii HOM05D006083 ORTHO05D007634 2.5e-43 183.0 554 29.8
Lalb_Chr04g0257831 Lupinus albus HOM05D006083 ORTHO05D007634 4.4e-32 145.6 435 31.7
Oeu023787.1 Olea europaea HOM05D006083 ORTHO05D007634 3.7e-31 142.5 364 33.2
Glyma.02G093802 Glycine max HOM05D006083 ORTHO05D007634 1.6e-29 137.1 138 44.2
Ca_07226_v3 Cicer arietinum L. HOM05D006083 ORTHO05D007634 5.9e-29 135.2 148 44.6
Lalb_Chr10g0091761 Lupinus albus HOM05D006083 ORTHO05D007634 3.6e-26 125.9 415 32.5
Cpa.g.sc1.376 Carica papaya HOM05D006083 ORTHO05D007634 1.7e-23 117.1 360 31.4
Sc06g0002670 Simmondsia chinensis HOM05D006083 ORTHO05D007634 9.5e-19 101.3 283 32.5
vmacro10806 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 5.2e-17 95.5 41 100.0
Lsat_1_v5_gn_7_4020 Lactuca sativa HOM05D006083 ORTHO05D007634 8.3e-15 88.2 65 70.8
ATR0618G162 Amborella trichopoda HOM05D006083 ORTHO05D007634 1.1e-14 87.8 92 47.8
HPP92_018997 Vanilla planifolia HOM05D006083 ORTHO05D007634 5.4e-14 85.5 290 31.7
RcHm_v2.0_Chr3g0492191 Rosa chinensis HOM05D006083 ORTHO05D007634 7.0e-14 85.1 227 36.1
AL7G29000 Arabidopsis lyrata HOM05D006083 ORTHO05D011291 1.3e-12 80.9 141 37.6
TPR.G40211 Trifolium pratense HOM05D006083 ORTHO05D007634 3.8e-12 79.3 322 28.9
CSS0032344 Camellia sinensis var. sinensis HOM05D007743 ORTHO05D004645 3.4e-08 66.2 120 35.8
CSS0013406 Camellia sinensis var. sinensis HOM05D007743 ORTHO05D004645 3.7e-07 62.8 120 35.0
Rhsim08G0115200 Rhododendron simsii HOM05D007743 ORTHO05D004645 1.4e-06 60.8 106 35.8
AagrBONN_evm.TU.Sc2ySwM_228.2798 Anthoceros agrestis HOM05D006083 ORTHO05D007634 1.8e-06 60.5 83 42.2


User provided reference genes

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