Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07103 Vaccinium macrocarpon HOM05D013739 ORTHO05D013231 6.7e-45 184.1 87 100.0
vmacro08792 Vaccinium macrocarpon HOM05D013739 ORTHO05D013231 6.3e-35 151.0 72 95.8
vmacro08793 Vaccinium macrocarpon HOM05D013739 ORTHO05D013231 6.3e-35 151.0 72 95.8
QL02p073961 Quercus lobata HOM05D000023 ORTHO05D000014 2.2e-27 125.9 75 74.7
QL03p002046 Quercus lobata HOM05D000023 ORTHO05D000014 2.2e-27 125.9 75 74.7
QL03p002053 Quercus lobata HOM05D000023 ORTHO05D000014 2.2e-27 125.9 75 74.7
CSS0002592 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 7.0e-26 120.9 75 74.7
CSS0032915 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 7.0e-26 120.9 75 74.7
CSS0046454 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 7.0e-26 120.9 75 74.7
Rhsim04G0045100 Rhododendron simsii HOM05D000023 ORTHO05D000014 2.6e-25 119.0 75 77.3
CSS0001857 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.2e-24 115.9 75 73.3
CSS0002067 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.2e-24 115.9 75 73.3
ECA234G2706 Erigeron canadensis HOM05D000023 ORTHO05D000014 6.5e-24 114.4 75 69.3
Rhsim08G0130700 Rhododendron simsii HOM05D000023 ORTHO05D000014 6.5e-24 114.4 76 69.7
Rhsim13G0053900 Rhododendron simsii HOM05D000023 ORTHO05D000014 6.5e-24 114.4 76 69.7
ECA233G2344 Erigeron canadensis HOM05D000023 ORTHO05D000014 8.5e-24 114.0 78 65.4
Rhsim12G0154800 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.9e-23 112.8 75 66.7
PSO541G5902 Papaver somniferum HOM05D000023 ORTHO05D000014 1.6e-22 109.8 78 64.1
Rhsim01G0133500 Rhododendron simsii HOM05D000023 ORTHO05D000014 4.7e-22 108.2 94 62.8
Lj6g0020030 Lotus japonicus HOM05D000023 ORTHO05D000014 1.4e-21 106.7 77 66.2
vmacro07091 Vaccinium macrocarpon HOM05D001028 ORTHO05D000827 3.5e-17 92.0 67 68.7
Thecc.01G248000 Theobroma cacao HOM05D000023 ORTHO05D000014 5.0e-16 88.2 72 54.2
CSS0028938 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.2e-12 77.0 80 48.8
CSS0034207 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.2e-12 77.0 80 48.8
CSS0044352 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.5e-12 76.6 80 48.8
CSS0003540 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.0e-12 76.3 80 47.5
QL05p032238 Quercus lobata HOM05D013739 ORTHO05D013231 2.6e-12 75.9 41 75.6
QL02p021831 Quercus lobata HOM05D013739 ORTHO05D013231 7.5e-12 74.3 41 73.2
TWI23G0140 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 2.4e-10 69.3 66 51.5
CSS0002785 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 3.1e-10 68.9 63 52.4
CSS0007279 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 3.1e-10 68.9 63 52.4
CSS0024754 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 3.1e-10 68.9 63 52.4
CSS0040949 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 3.1e-10 68.9 63 52.4
MD01G1106300 Malus domestica HOM05D000023 ORTHO05D000014 3.1e-10 68.9 63 52.4
AUR62037654 Chenopodium quinoa HOM05D000023 ORTHO05D013231 5.4e-10 68.2 59 55.9
Lj2C317T13 Lonicera japonica HOM05D013739 ORTHO05D013231 5.4e-10 68.2 41 73.2
Lj8C459T6 Lonicera japonica HOM05D013739 ORTHO05D013231 5.4e-10 68.2 41 73.2
CSS0016206 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 7.0e-10 67.8 63 50.8
Lj5C81G33 Lonicera japonica HOM05D013739 ORTHO05D013231 7.0e-10 67.8 40 70.0
Lj8A259T66 Lonicera japonica HOM05D013739 ORTHO05D013231 7.0e-10 67.8 41 73.2
SHI14057 Sapria himalayana HOM05D000023 ORTHO05D000014 7.0e-10 67.8 66 51.5
SHI29206 Sapria himalayana HOM05D000023 ORTHO05D000014 7.0e-10 67.8 66 50.0
SHI30094 Sapria himalayana HOM05D000023 ORTHO05D000014 7.0e-10 67.8 66 51.5
CSS0023595 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.6e-09 66.6 63 50.8
SHI08624 Sapria himalayana HOM05D000023 ORTHO05D000014 1.6e-09 66.6 66 50.0
SHI10265 Sapria himalayana HOM05D000023 ORTHO05D000014 1.6e-09 66.6 66 50.0
SHI12536 Sapria himalayana HOM05D000023 ORTHO05D000014 1.6e-09 66.6 66 50.0
SHI15400 Sapria himalayana HOM05D000023 ORTHO05D000014 1.6e-09 66.6 66 50.0
SHI20222 Sapria himalayana HOM05D000023 ORTHO05D000014 1.6e-09 66.6 66 50.0
SHI28737 Sapria himalayana HOM05D000023 ORTHO05D000014 1.6e-09 66.6 66 50.0
TWI39G0975 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.6e-09 66.6 66 51.5
EL10Ac8g19620 Beta vulgaris HOM05D000023 ORTHO05D013231 2.0e-09 66.2 59 52.5
EL10Ac5g11764 Beta vulgaris HOM05D000023 ORTHO05D000014 3.5e-09 65.5 59 52.5
PSO017G3149 Papaver somniferum HOM05D000023 ORTHO05D000014 4.5e-09 65.1 60 46.7
SHI04220 Sapria himalayana HOM05D000023 ORTHO05D000014 4.5e-09 65.1 66 48.5
SHI28525 Sapria himalayana HOM05D000023 ORTHO05D000014 4.5e-09 65.1 66 50.0
TWI53G0199 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 4.5e-09 65.1 66 51.5
SHI10851 Sapria himalayana HOM05D000023 ORTHO05D000014 5.9e-09 64.7 66 48.5
EL10Ac7g17858 Beta vulgaris HOM05D000023 ORTHO05D000014 7.7e-09 64.3 59 52.5
SHI14517 Sapria himalayana HOM05D000023 ORTHO05D000014 7.7e-09 64.3 66 47.0
SHI00523 Sapria himalayana HOM05D000023 ORTHO05D000014 1.0e-08 63.9 57 52.6
SHI07809 Sapria himalayana HOM05D000023 ORTHO05D000014 1.0e-08 63.9 66 48.5
SHI31135 Sapria himalayana HOM05D000023 ORTHO05D000014 1.0e-08 63.9 66 48.5
SHI09351 Sapria himalayana HOM05D000023 ORTHO05D000014 1.3e-08 63.5 66 48.5
SHI11757 Sapria himalayana HOM05D000023 ORTHO05D000014 1.3e-08 63.5 66 47.0
SHI26741 Sapria himalayana HOM05D000023 ORTHO05D000014 1.3e-08 63.5 68 48.5
SHI30062 Sapria himalayana HOM05D000023 ORTHO05D000014 1.3e-08 63.5 46 63.0
SHI47314 Sapria himalayana HOM05D000023 ORTHO05D000014 1.3e-08 63.5 66 48.5
SHI47801 Sapria himalayana HOM05D000023 ORTHO05D000014 1.3e-08 63.5 66 48.5
FvH4_5g36511 Fragaria vesca HOM05D014056 ORTHO05D022566 1.7e-08 63.2 95 42.1
SHI00996 Sapria himalayana HOM05D002920 ORTHO05D000014 1.7e-08 63.2 86 40.7
SHI10981 Sapria himalayana HOM05D000023 ORTHO05D000014 1.7e-08 63.2 66 48.5
AUR62040520 Chenopodium quinoa HOM05D000023 ORTHO05D013231 2.2e-08 62.8 57 49.1
MBI08_g05063_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 2.2e-08 62.8 74 36.5
SHI00080 Sapria himalayana HOM05D000023 ORTHO05D000014 2.2e-08 62.8 66 48.5
SHI06138 Sapria himalayana HOM05D000023 ORTHO05D000014 2.2e-08 62.8 66 48.5
SHI13827 Sapria himalayana HOM05D000023 ORTHO05D000014 2.2e-08 62.8 66 47.0
SHI27647 Sapria himalayana HOM05D000002 ORTHO05D000014 2.2e-08 62.8 66 47.0
SHI27840 Sapria himalayana HOM05D000023 ORTHO05D000014 2.2e-08 62.8 66 47.0
AUR62015349 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.9e-08 62.4 51 54.9
RcHm_v2.0_Chr1g0361981 Rosa chinensis HOM05D000023 ORTHO05D000014 3.8e-08 62.0 58 51.7
MBI18_g18666_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 5.0e-08 61.6 62 40.3
MD01G1106700 Malus domestica HOM05D000023 ORTHO05D000014 5.0e-08 61.6 53 56.6
SHI07783 Sapria himalayana HOM05D000023 ORTHO05D000014 5.0e-08 61.6 82 40.2
SHI23475 Sapria himalayana HOM05D000023 ORTHO05D000014 5.0e-08 61.6 66 47.0
SHI30238 Sapria himalayana HOM05D000023 ORTHO05D000014 5.0e-08 61.6 66 47.0
MBI05_g24574_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 6.5e-08 61.2 62 41.9
RcHm_v2.0_Chr2g0141951 Rosa chinensis HOM05D000023 ORTHO05D000014 6.5e-08 61.2 58 50.0
EL10Ac4g08562 Beta vulgaris HOM05D000023 ORTHO05D000014 8.5e-08 60.8 100 37.0
EL10Ac5g12068 Beta vulgaris HOM05D000023 ORTHO05D000014 8.5e-08 60.8 100 37.0
SHI03818 Sapria himalayana HOM05D000023 ORTHO05D013231 1.1e-07 60.5 36 75.0
SHI30750 Sapria himalayana HOM05D000023 ORTHO05D000014 1.1e-07 60.5 79 39.2
MBI13_g21367_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 1.5e-07 60.1 54 50.0
MBI17_g39914_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 1.5e-07 60.1 62 40.3
RcHm_v2.0_Chr7g0218361 Rosa chinensis HOM05D000023 ORTHO05D000014 1.5e-07 60.1 71 47.9
SHI00440 Sapria himalayana HOM05D000023 ORTHO05D000014 1.5e-07 60.1 66 47.0
SHI18542 Sapria himalayana HOM05D000023 ORTHO05D000014 1.5e-07 60.1 66 47.0
MBI06_g38703_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 1.9e-07 59.7 62 40.3
SHI05021 Sapria himalayana HOM05D000023 ORTHO05D000014 1.9e-07 59.7 66 45.5
SHI14959 Sapria himalayana HOM05D000023 ORTHO05D000014 1.9e-07 59.7 66 45.5
SHI04224 Sapria himalayana HOM05D000023 ORTHO05D000014 2.5e-07 59.3 62 46.8
SHI11091 Sapria himalayana HOM05D000023 ORTHO05D000014 2.5e-07 59.3 62 46.8
SHI12368 Sapria himalayana HOM05D000023 ORTHO05D000014 2.5e-07 59.3 62 46.8
SHI25121 Sapria himalayana HOM05D000023 ORTHO05D000014 2.5e-07 59.3 62 46.8
Rhsim01G0133300 Rhododendron simsii HOM05D013739 ORTHO05D013231 3.2e-07 58.9 68 50.0
SHI07150 Sapria himalayana HOM05D000023 ORTHO05D000014 3.2e-07 58.9 65 46.2
SHI10237 Sapria himalayana HOM05D000023 ORTHO05D000014 3.2e-07 58.9 66 45.5
SHI24516 Sapria himalayana HOM05D000023 ORTHO05D000014 3.2e-07 58.9 59 47.5
FvH4_2g19761 Fragaria vesca HOM05D000023 ORTHO05D000014 4.2e-07 58.5 91 41.8
SHI26085 Sapria himalayana HOM05D000023 ORTHO05D000014 5.5e-07 58.2 64 46.9
MBI19_g17594_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 7.2e-07 57.8 70 37.1
SHI22925 Sapria himalayana HOM05D000023 ORTHO05D000014 7.2e-07 57.8 66 45.5
AUR62041285 Chenopodium quinoa HOM05D000023 ORTHO05D013231 9.4e-07 57.4 56 50.0
MBI07_g05483_MAGBIO Magnolia biondii HOM05D001472 ORTHO05D000014 9.4e-07 57.4 82 35.4
Rhsim03G0072400 Rhododendron simsii HOM05D000023 ORTHO05D000014 9.4e-07 57.4 33 78.8
SHI02470 Sapria himalayana HOM05D000023 ORTHO05D000014 9.4e-07 57.4 65 47.7
SHI06954 Sapria himalayana HOM05D000023 ORTHO05D000014 9.4e-07 57.4 66 47.0
Aqoxy5G02919 Aquilegia oxysepala HOM05D000023 ORTHO05D000014 1.2e-06 57.0 61 47.5
EL10Ac2g03067 Beta vulgaris HOM05D000023 ORTHO05D000014 1.2e-06 57.0 100 36.0
MBI18_g04925_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 1.2e-06 57.0 75 34.7
MBI02_g23136_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 1.6e-06 56.6 73 39.7
MBI18_g14735_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 1.6e-06 56.6 56 46.4
SHI10513 Sapria himalayana HOM05D000023 ORTHO05D000014 2.1e-06 56.2 62 43.5
SHI40523 Sapria himalayana HOM05D000023 ORTHO05D000014 2.1e-06 56.2 55 50.9
MBI11_g28436_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 2.7e-06 55.8 57 43.9
Rhsim04G0154000 Rhododendron simsii HOM05D013739 ORTHO05D013231 2.7e-06 55.8 42 57.1
SHI28506 Sapria himalayana HOM05D000023 ORTHO05D000014 2.7e-06 55.8 62 43.5
SHI31427 Sapria himalayana HOM05D000023 ORTHO05D000014 2.7e-06 55.8 62 45.2
Rhsim03G0071100 Rhododendron simsii HOM05D000023 ORTHO05D000014 3.6e-06 55.5 33 75.8
Rhsim03G0071500 Rhododendron simsii HOM05D000023 ORTHO05D000014 3.6e-06 55.5 33 75.8
SHI03370 Sapria himalayana HOM05D004002 ORTHO05D000023 3.6e-06 55.5 72 43.1
SHI13681 Sapria himalayana HOM05D000023 ORTHO05D000014 3.6e-06 55.5 51 52.9
SHI21185 Sapria himalayana HOM05D000023 ORTHO05D000014 3.6e-06 55.5 59 47.5
SHI23562 Sapria himalayana HOM05D000023 ORTHO05D000014 3.6e-06 55.5 59 47.5
SHI25821 Sapria himalayana HOM05D000023 ORTHO05D000014 4.7e-06 55.1 66 42.4
SHI07075 Sapria himalayana HOM05D000023 ORTHO05D000014 6.1e-06 54.7 62 43.5
FvH4_1g19741 Fragaria vesca HOM05D000404 ORTHO05D022566 8.0e-06 54.3 64 45.3
MBI16_g10852_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 8.0e-06 54.3 48 47.9
MBI16_g22654_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 8.0e-06 54.3 61 36.1
SHI30506 Sapria himalayana HOM05D000023 ORTHO05D000014 8.0e-06 54.3 66 40.9


User provided reference genes

Program Settings