Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07070 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 1.9e-110 402.5 200 100.0
Actinidia06769 Actinidia chinensis HOM05D002510 ORTHO05D006928 5.3e-81 304.7 190 80.0
CSS0006577 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 1.5e-67 260.0 191 70.2
CSS0041581 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 1.5e-67 260.0 191 70.2
Dinv31320 Davidia involucrata HOM05D002510 ORTHO05D006928 1.3e-66 256.9 190 72.6
Actinidia38854 Actinidia chinensis HOM05D002510 ORTHO05D006928 9.1e-65 250.8 192 71.4
Dinv36437 Davidia involucrata HOM05D002510 ORTHO05D006928 5.0e-63 245.0 192 69.8
Rhsim03G0120400 Rhododendron simsii HOM05D002510 ORTHO05D006928 1.8e-60 236.5 135 83.0
TAR369G0428 Trochodendron aralioides HOM05D002510 ORTHO05D006928 2.6e-59 232.6 194 66.0
Lj1C913T4 Lonicera japonica HOM05D002510 ORTHO05D006928 3.3e-59 232.3 191 67.0
Haze_16887 Corylus avellana HOM05D002510 ORTHO05D006928 4.8e-58 228.4 199 63.3
Potri.008G039300 Populus trichocarpa HOM05D002510 ORTHO05D006928 4.8e-58 228.4 198 63.1
GSVIVG01016268001 Vitis vinifera HOM05D002510 ORTHO05D006928 4.8e-58 228.4 191 64.9
CiPaw.01G272400 Carya illinoinensis HOM05D002510 ORTHO05D006928 9.1e-57 224.2 197 60.4
CSS0017911 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 1.2e-56 223.8 135 80.7
DCAR_019102 Daucus carota HOM05D002510 ORTHO05D006928 2.7e-56 222.6 190 65.3
Gorai.011G239300 Gossypium raimondii HOM05D002510 ORTHO05D006928 3.5e-56 222.2 192 60.9
vmacro04869 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 3.5e-56 222.2 192 64.1
Thecc.10G074800 Theobroma cacao HOM05D002510 ORTHO05D006928 4.5e-56 221.9 195 62.6
MD01G1108300 Malus domestica HOM05D002510 ORTHO05D006928 5.9e-56 221.5 200 59.5
Phvul.007G094800 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 5.9e-56 221.5 191 61.8
FAN03G1741 Fragaria x ananassa HOM05D002510 ORTHO05D006928 7.7e-56 221.1 190 61.6
Psat6g183480 Pisum sativum HOM05D002510 ORTHO05D006928 7.7e-56 221.1 190 62.1
Medtr1g095000 Medicago truncatula HOM05D002510 ORTHO05D006928 1.0e-55 220.7 194 61.3
Potri.010G222900 Populus trichocarpa HOM05D002510 ORTHO05D006928 1.0e-55 220.7 190 61.1
FvH4_7g19440 Fragaria vesca HOM05D002510 ORTHO05D006928 1.3e-55 220.3 190 61.1
FAN01G2940 Fragaria x ananassa HOM05D002510 ORTHO05D007210 1.3e-55 220.3 198 61.6
arahy.Tifrunner.gnm1.ann1.B5KM0B Arachis hypogaea HOM05D002510 ORTHO05D006928 1.7e-55 219.9 186 62.9
FAN06G0282 Fragaria x ananassa HOM05D002510 ORTHO05D006928 1.7e-55 219.9 190 60.5
Duzib114G0372 Durio zibethinus HOM05D002510 ORTHO05D006928 2.2e-55 219.5 192 62.5
FAN10G3768 Fragaria x ananassa HOM05D002510 ORTHO05D007210 2.2e-55 219.5 190 60.5
Gohir.A10G205600 Gossypium hirsutum HOM05D002510 ORTHO05D006928 2.9e-55 219.2 132 77.3
Gohir.D10G213800 Gossypium hirsutum HOM05D002510 ORTHO05D006928 2.9e-55 219.2 132 77.3
RcHm_v2.0_Chr1g0363321 Rosa chinensis HOM05D002510 ORTHO05D006928 2.9e-55 219.2 190 60.5
arahy.Tifrunner.gnm1.ann1.D0MVTX Arachis hypogaea HOM05D002510 ORTHO05D006928 6.5e-55 218.0 193 61.1
Eucgr.G02836 Eucalyptus grandis HOM05D002510 ORTHO05D006928 6.5e-55 218.0 194 60.8
FAN10G0968 Fragaria x ananassa HOM05D002510 ORTHO05D007210 1.5e-54 216.9 193 59.1
Sabra08G0027000 Salix brachista HOM05D002510 ORTHO05D006928 1.9e-54 216.5 133 77.4
TAR623G0044 Trochodendron aralioides HOM05D002510 ORTHO05D006928 3.2e-54 215.7 196 62.2
EL10Ac3g05855 Beta vulgaris HOM05D002510 ORTHO05D006928 4.2e-54 215.3 190 60.0
TPR.G1934 Trifolium pratense HOM05D002510 ORTHO05D006928 5.5e-54 214.9 191 59.7
Prupe.2G213200 Prunus persica HOM05D002510 ORTHO05D006928 7.2e-54 214.5 203 58.6
QL08p055746 Quercus lobata HOM05D002510 ORTHO05D006928 7.2e-54 214.5 197 57.4
Duzib128G0305 Durio zibethinus HOM05D002510 ORTHO05D006928 1.2e-53 213.8 194 61.3
Glyma.20G179800 Glycine max HOM05D002510 ORTHO05D006928 1.6e-53 213.4 190 62.6
THA.LOC104827063 Tarenaya hassleriana HOM05D002510 ORTHO05D006928 2.1e-53 213.0 172 64.5
Glyma.10G210800 Glycine max HOM05D002510 ORTHO05D006928 3.6e-53 212.2 190 62.1
MD07G1174400 Malus domestica HOM05D002510 ORTHO05D006928 3.6e-53 212.2 203 57.1
Manes.07G100200 Manihot esculenta HOM05D002510 ORTHO05D006928 4.7e-53 211.8 195 56.4
Lj5g0027397 Lotus japonicus HOM05D002510 ORTHO05D006928 6.1e-53 211.5 190 59.5
Nitab4.5_0001053g0060 Nicotiana tabacum HOM05D002510 ORTHO05D006928 2.3e-52 209.5 190 61.1
AL4G36300 Arabidopsis lyrata HOM05D002510 ORTHO05D006928 3.0e-52 209.1 197 58.4
Carub.0004s2104 Capsella rubella HOM05D002510 ORTHO05D006928 4.0e-52 208.8 190 60.5
Ca_10569_v3 Cicer arietinum L. HOM05D002800 ORTHO05D008563 4.0e-52 208.8 133 75.2
PGR142G1169 Punica granatum HOM05D002510 ORTHO05D006928 4.0e-52 208.8 148 70.3
Sc20g0001820 Simmondsia chinensis HOM05D002510 ORTHO05D006928 4.0e-52 208.8 198 58.6
TWI15G0405 Tripterygium wilfordii HOM05D002510 ORTHO05D006928 6.8e-52 208.0 190 59.5
Ciclev10032329m.g Citrus clementina HOM05D002510 ORTHO05D006928 8.8e-52 207.6 199 59.3
AT2G39000 Arabidopsis thaliana HOM05D002510 ORTHO05D006928 1.2e-51 207.2 193 60.1
MSTRG.9172 Avicennia marina HOM05D002510 ORTHO05D006928 1.2e-51 207.2 203 57.1
Lalb_Chr02g0142201 Lupinus albus HOM05D002510 ORTHO05D006928 2.0e-51 206.5 193 61.1
Oeu031347.1 Olea europaea HOM05D002510 ORTHO05D006928 2.6e-51 206.1 190 60.5
Cc02_g11320 Coffea canephora HOM05D002510 ORTHO05D006928 3.4e-51 205.7 183 60.7
AUR62018249 Chenopodium quinoa HOM05D002510 ORTHO05D006928 4.4e-51 205.3 197 58.4
CAN.G131.8 Capsicum annuum HOM05D002510 ORTHO05D006928 5.7e-51 204.9 166 63.9
PGSC0003DMG400033889 Solanum tuberosum HOM05D002510 ORTHO05D006928 5.7e-51 204.9 160 65.6
Nitab4.5_0002524g0010 Nicotiana tabacum HOM05D002510 ORTHO05D006928 7.5e-51 204.5 190 60.0
Thhalv10017009m.g Eutrema salsugineum HOM05D002510 ORTHO05D006928 9.8e-51 204.1 132 74.2
BcaC02g12914 Brassica carinata HOM05D002510 ORTHO05D006928 1.3e-50 203.8 188 58.0
Lalb_Chr06g0162351 Lupinus albus HOM05D002510 ORTHO05D006928 1.3e-50 203.8 144 69.4
Nn2g10810 Nelumbo nucifera HOM05D002510 ORTHO05D006928 1.3e-50 203.8 132 73.5
Gohir.A10G205500 Gossypium hirsutum HOM05D002510 ORTHO05D006928 1.7e-50 203.4 132 71.2
Sp4g21360 Schrenkiella parvula HOM05D002510 ORTHO05D006928 1.7e-50 203.4 143 69.9
Hund12054 Selenicereus undatus HOM05D002510 ORTHO05D006928 1.7e-50 203.4 203 55.7
C04p67010 Brassica napus HOM05D002510 ORTHO05D006928 2.2e-50 203.0 188 58.0
CARHR133780 Cardamine hirsuta HOM05D002510 ORTHO05D006928 2.2e-50 203.0 169 63.9
MELO3C019798.2 Cucumis melo HOM05D002510 ORTHO05D006928 2.8e-50 202.6 133 72.9
CsaV3_6G036450 Cucumis sativus L. HOM05D002510 ORTHO05D006928 2.8e-50 202.6 133 72.9
Aa31LG5G20680 Aethionema arabicum HOM05D002510 ORTHO05D006928 3.7e-50 202.2 132 72.7
Atru.chr12.758 Acer truncatum HOM05D002510 ORTHO05D006928 6.3e-50 201.4 190 58.9
BolC4t28203H Brassica oleracea HOM05D002510 ORTHO05D006928 8.3e-50 201.1 189 57.1
Lsat_1_v5_gn_2_112320 Lactuca sativa HOM05D002510 ORTHO05D006928 1.4e-49 200.3 193 61.1
Sed0007153 Sechium edule HOM05D002510 ORTHO05D006928 1.4e-49 200.3 157 68.2
ClCG08G007520 Citrullus lanatus HOM05D002510 ORTHO05D006928 3.1e-49 199.1 199 56.3
CAN.G790.5 Capsicum annuum HOM05D002510 ORTHO05D006928 5.4e-49 198.4 147 67.3
HanXRQChr14g0456861 Helianthus annuus HOM05D002510 ORTHO05D006928 7.0e-49 198.0 191 59.2
PSO063G7611 Papaver somniferum HOM05D002510 ORTHO05D006928 1.2e-48 197.2 190 54.7
Sabra10G0172300 Salix brachista HOM05D002510 ORTHO05D006928 1.2e-48 197.2 135 71.9
A04p29730 Brassica napus HOM05D002510 ORTHO05D006928 2.0e-48 196.4 190 57.4
Ah.10g032650 Amaranthus hybridus HOM05D002510 ORTHO05D006928 4.5e-48 195.3 133 71.4
BraA04t18437Z Brassica rapa HOM05D002510 ORTHO05D006928 4.5e-48 195.3 190 56.8
Aqoxy1G01228 Aquilegia oxysepala HOM05D002510 ORTHO05D006928 7.7e-48 194.5 180 57.2
Migut.F01984 Erythranthe guttata HOM05D002510 ORTHO05D006928 7.7e-48 194.5 192 57.3
PSO339G5277 Papaver somniferum HOM05D002510 ORTHO05D006928 7.7e-48 194.5 190 54.7
AUR62037755 Chenopodium quinoa HOM05D002510 ORTHO05D006928 1.3e-47 193.7 155 64.5
Glyma.02G074000 Glycine max HOM05D002510 ORTHO05D006928 8.6e-47 191.0 192 59.4
HPP92_014717 Vanilla planifolia HOM05D002510 ORTHO05D006928 2.5e-46 189.5 137 65.7
Phvul.004G083200 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 3.3e-46 189.1 171 62.6
SalBow4G2249 Salvia bowleyana HOM05D002510 ORTHO05D006928 1.2e-45 187.2 132 70.5
VMungo1197G0001 Vigna mungo HOM05D002510 ORTHO05D006928 3.6e-45 185.7 171 60.2
CDE06G2540 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 3.4e-43 179.1 144 61.1
Migut.F01753 Erythranthe guttata HOM05D002510 ORTHO05D006928 7.5e-43 177.9 141 65.2
CDE04G1444 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 9.8e-43 177.6 157 58.0
Sopen04g011630 Solanum pennellii HOM05D002510 ORTHO05D006928 3.7e-42 175.6 142 63.4
VMungo0464G1224 Vigna mungo HOM05D002510 ORTHO05D006928 6.3e-42 174.9 199 55.3
Solyc04g025240.2 Solanum lycopersicum HOM05D002510 ORTHO05D006928 3.1e-41 172.6 141 61.7
Lj3g0006441 Lotus japonicus HOM05D002510 ORTHO05D006928 2.7e-40 169.5 133 63.2
Zm00001eb172140 Zea mays HOM05D002510 ORTHO05D006928 5.9e-40 168.3 141 58.9
SGA_v2.0_scaffold62G21410 Striga asiatica HOM05D002510 ORTHO05D006928 1.5e-38 163.7 117 68.4
Lalb_Chr03g0035921 Lupinus albus HOM05D002510 ORTHO05D006928 2.5e-38 162.9 199 49.7
Lj2g0015916 Lotus japonicus HOM05D002510 ORTHO05D006928 4.3e-38 162.2 192 53.6
ATR0048G011 Amborella trichopoda HOM05D002510 ORTHO05D006928 5.6e-38 161.8 136 55.9
Peaxi162Scf01719g00013 Petunia axillaris HOM05D002510 ORTHO05D006928 1.2e-37 160.6 150 56.7
Os02g0806000 Oryza sativa ssp. japonica HOM05D002510 ORTHO05D006928 6.1e-37 158.3 170 50.6
unitig_88.g27817 Utricularia gibba HOM05D002510 ORTHO05D006928 4.4e-35 152.1 137 59.1
Lj3g0019343 Lotus japonicus HOM05D002510 ORTHO05D006928 1.3e-34 150.6 149 53.0
ECA238G3090 Erigeron canadensis HOM05D002510 ORTHO05D006928 5.4e-33 145.2 172 50.6
arahy.Tifrunner.gnm1.ann1.DB5KD4 Arachis hypogaea HOM05D002510 ORTHO05D006928 7.0e-33 144.8 200 47.0
arahy.Tifrunner.gnm1.ann1.L5PTYD Arachis hypogaea HOM05D002510 ORTHO05D006928 2.7e-32 142.9 195 46.7
Cpa.g.sc53.85 Carica papaya HOM05D002510 ORTHO05D006928 5.0e-31 138.7 83 80.7
SEGI_15474 Sequoiadendron giganteum HOM05D002510 ORTHO05D006928 2.1e-29 133.3 119 53.8
Gohir.D10G213900 Gossypium hirsutum HOM05D002510 ORTHO05D006928 5.2e-28 128.6 74 79.7
Atru.chr12.782 Acer truncatum HOM05D002510 ORTHO05D006928 2.6e-27 126.3 83 72.3
Glyma.16G155400 Glycine max HOM05D002510 ORTHO05D006928 9.2e-25 117.9 202 40.6
Haze_18780 Corylus avellana HOM05D000278 ORTHO05D005754 1.6e-24 117.1 181 43.6
SalBow3G0053 Salvia bowleyana HOM05D002510 ORTHO05D006928 1.6e-24 117.1 74 75.7
Ciclev10024578m.g Citrus clementina HOM05D002510 ORTHO05D006928 2.3e-23 113.2 90 60.0
Oeu014386.1 Olea europaea HOM05D002510 ORTHO05D006928 1.8e-20 103.6 74 66.2
Nn3g20716 Nelumbo nucifera HOM05D002510 ORTHO05D006928 7.5e-19 98.2 135 47.4
Mapoly0033s0159 Marchantia polymorpha HOM05D002510 ORTHO05D006928 4.1e-17 92.4 126 37.3
Actinidia37356 Actinidia chinensis HOM05D002510 ORTHO05D006928 1.5e-11 73.9 67 59.7
SMO134G0014 Selaginella moellendorffii HOM05D002510 ORTHO05D006928 5.8e-11 72.0 116 39.7
AagrBONN_evm.TU.Sc2ySwM_117.96 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.4e-10 68.6 95 42.1


User provided reference genes

Program Settings