Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 2.0e-225 785.4 384 100.0
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 9.2e-191 670.2 338 93.5
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 7.1e-183 644.0 338 89.1
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 7.1e-183 644.0 338 88.8
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 7.1e-183 644.0 338 88.8
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 2.0e-177 625.9 338 85.5
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 2.0e-177 625.9 338 86.4
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 2.9e-176 622.1 338 85.8
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.9e-176 622.1 340 85.3
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 2.9e-176 622.1 338 86.1
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 1.4e-175 619.8 371 79.8
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 1.9e-175 619.4 338 85.8
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.4e-175 619.0 338 85.5
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.4e-175 619.0 338 85.5
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 2.7e-174 615.5 338 83.7
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 3.5e-174 615.1 338 84.9
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 7.9e-174 614.0 337 85.5
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 1.0e-173 613.6 338 84.3
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.0e-173 613.6 354 82.5
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 1.3e-173 613.2 338 85.2
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 2.3e-173 612.5 338 84.6
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 3.0e-173 612.1 338 84.6
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 6.6e-173 610.9 338 84.0
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 1.9e-172 609.4 338 83.1
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 1.9e-172 609.4 354 80.8
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 3.3e-172 608.6 338 82.8
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 9.6e-172 607.1 337 84.0
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 9.6e-172 607.1 338 83.1
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.1e-171 605.9 342 83.0
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 3.6e-171 605.1 338 81.7
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 3.6e-171 605.1 338 82.8
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 8.1e-171 604.0 338 83.7
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 1.1e-170 603.6 338 84.3
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 1.8e-170 602.8 323 87.3
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 1.8e-170 602.8 338 83.1
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 2.4e-170 602.4 338 84.9
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 5.3e-170 601.3 339 84.1
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 5.3e-170 601.3 339 84.1
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 5.3e-170 601.3 338 81.7
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 2.0e-169 599.4 338 81.1
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 2.6e-169 599.0 338 83.1
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 3.4e-169 598.6 338 83.7
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 5.8e-169 597.8 338 83.1
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 9.9e-169 597.0 338 83.4
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 9.9e-169 597.0 338 83.1
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 1.3e-168 596.7 338 83.4
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 3.8e-168 595.1 338 80.8
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 4.9e-168 594.7 338 82.8
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 4.9e-168 594.7 338 81.4
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 6.4e-168 594.3 338 83.4
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 6.4e-168 594.3 338 82.5
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 8.4e-168 594.0 338 82.5
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 8.4e-168 594.0 359 78.0
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 1.1e-167 593.6 338 82.2
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 2.4e-167 592.4 339 83.5
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 3.2e-167 592.0 338 80.8
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 4.2e-167 591.7 338 81.7
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 9.3e-167 590.5 338 80.2
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 1.2e-166 590.1 338 82.0
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 1.2e-166 590.1 338 82.2
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 1.6e-166 589.7 338 80.2
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 1.6e-166 589.7 338 84.3
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 2.1e-166 589.3 338 80.5
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 2.1e-166 589.3 338 82.2
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 1.0e-165 587.0 339 80.5
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 1.3e-165 586.6 338 82.0
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 2.3e-165 585.9 338 81.7
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 2.3e-165 585.9 338 79.0
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 3.0e-165 585.5 338 81.7
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 5.1e-165 584.7 338 81.4
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 6.7e-165 584.3 338 79.6
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 6.7e-165 584.3 338 79.6
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 1.1e-164 583.6 338 82.5
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 3.3e-164 582.0 334 81.1
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 3.3e-164 582.0 338 79.9
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 4.3e-164 581.6 338 79.9
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 9.6e-164 580.5 338 81.7
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 6.2e-163 577.8 337 82.8
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 1.4e-162 576.6 342 79.2
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 1.4e-162 576.6 337 80.1
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 1.4e-162 576.6 337 82.5
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 1.8e-162 576.2 338 81.1
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 2.6e-161 572.4 365 76.2
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 3.4e-161 572.0 338 80.2
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 2.5e-159 565.8 355 77.2
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 1.0e-157 560.5 342 75.7
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.0e-157 558.9 311 83.3
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 8.7e-157 557.4 338 80.5
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 1.5e-156 556.6 299 86.6
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 4.8e-155 551.6 338 75.7
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 6.3e-155 551.2 342 74.3
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 2.4e-154 549.3 338 75.7
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 2.2e-152 542.7 304 83.2
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 1.1e-151 540.4 338 76.9
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 2.3e-149 532.7 370 72.4
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 3.9e-149 531.9 295 86.4
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 4.3e-148 528.5 338 75.7
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 1.0e-144 517.3 313 80.2
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 1.0e-141 507.3 363 66.7
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 1.1e-140 503.8 293 79.2
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 2.0e-137 493.0 340 68.2
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 7.7e-137 491.1 338 69.2
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 7.9e-134 481.1 277 79.1
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 3.9e-133 478.8 352 63.9
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 4.4e-132 475.3 352 64.2
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 7.4e-132 474.6 340 65.3
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 7.7e-129 464.5 343 65.3
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 3.2e-127 459.1 349 63.0
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 4.1e-122 442.2 338 65.1
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 1.1e-119 434.1 272 74.6
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 1.3e-112 410.6 341 58.1
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 5.1e-80 302.4 169 84.0
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 5.8e-76 288.9 356 41.0
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 1.6e-62 244.2 379 35.9
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 4.9e-51 206.1 163 60.1
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.1e-47 194.9 110 82.7
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.1e-47 194.9 110 82.7
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.5e-47 193.7 110 81.8
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 7.4e-39 165.6 99 78.8
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 4.7e-09 66.6 37 78.4
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 3.0e-08 63.9 40 70.0


User provided reference genes

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