Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06833 Vaccinium macrocarpon HOM05D005379 ORTHO05D006661 2.2e-232 808.5 396 100.0
Rhsim03G0161700 Rhododendron simsii HOM05D005379 ORTHO05D006661 3.2e-130 469.2 253 91.3
CSS0027857 Camellia sinensis var. sinensis HOM05D005379 ORTHO05D006661 5.2e-112 408.7 258 80.2
GSVIVG01013977001 Vitis vinifera HOM05D005379 ORTHO05D006661 1.9e-106 390.2 281 69.0
Actinidia31774 Actinidia chinensis HOM05D005379 ORTHO05D006661 1.6e-105 387.1 280 69.6
Lj1A584T32 Lonicera japonica HOM05D005379 ORTHO05D006661 1.2e-103 380.9 251 74.9
Eucgr.K00130 Eucalyptus grandis HOM05D005379 ORTHO05D006661 3.4e-103 379.4 281 66.2
TAR375G0328 Trochodendron aralioides HOM05D005379 ORTHO05D006661 7.5e-103 378.3 255 74.1
QL09p028045 Quercus lobata HOM05D005379 ORTHO05D006661 8.3e-102 374.8 252 74.6
Dinv06588 Davidia involucrata HOM05D005379 ORTHO05D006661 5.4e-101 372.1 224 80.8
Manes.14G038300 Manihot esculenta HOM05D005379 ORTHO05D006661 7.0e-101 371.7 280 66.1
CAN.G174.21 Capsicum annuum HOM05D005379 ORTHO05D006661 9.1e-101 371.3 275 66.9
MBI04_g36330_MAGBIO Magnolia biondii HOM05D005379 ORTHO05D006661 2.7e-100 369.8 253 71.1
MBI04_g38758_MAGBIO Magnolia biondii HOM05D005379 ORTHO05D006661 3.5e-100 369.4 253 71.5
Cfa013572 Carpinus fangiana HOM05D005379 ORTHO05D006661 1.0e-99 367.9 250 72.8
TAR374G0427 Trochodendron aralioides HOM05D005379 ORTHO05D006661 1.0e-99 367.9 255 72.2
Sc18g0007310 Simmondsia chinensis HOM05D005379 ORTHO05D006661 3.8e-99 365.9 281 64.8
Lalb_Chr05g0217631 Lupinus albus HOM05D005379 ORTHO05D006661 5.0e-99 365.5 250 70.4
RcHm_v2.0_Chr1g0373791 Rosa chinensis HOM05D005379 ORTHO05D006661 9.5e-98 361.3 258 66.3
Nitab4.5_0010756g0010 Nicotiana tabacum HOM05D005379 ORTHO05D006661 2.1e-97 360.1 259 66.8
Prupe.2G273100 Prunus persica HOM05D005379 ORTHO05D006661 3.6e-97 359.4 255 69.4
Sopen06g010750 Solanum pennellii HOM05D005379 ORTHO05D006661 3.6e-97 359.4 255 68.2
Hma1.2p1_0456F.1_g156820 Hydrangea macrophylla HOM05D005379 ORTHO05D006661 4.7e-97 359.0 383 52.2
Nitab4.5_0000262g0030 Nicotiana tabacum HOM05D005379 ORTHO05D006661 8.0e-97 358.2 253 69.2
Nitab4.5_0000448g0020 Nicotiana tabacum HOM05D005379 ORTHO05D006661 2.3e-96 356.7 256 69.5
Solyc06g034100.4 Solanum lycopersicum HOM05D005379 ORTHO05D006661 2.3e-96 356.7 255 68.2
TWI23G1062 Tripterygium wilfordii HOM05D005379 ORTHO05D006661 5.2e-96 355.5 255 68.2
MD01G1177600 Malus domestica HOM05D005379 ORTHO05D006661 1.5e-95 354.0 280 63.2
CANSAT56G1299 Cannabis sativa HOM05D005379 ORTHO05D006661 3.4e-95 352.8 260 66.9
Nitab4.5_0002211g0080 Nicotiana tabacum HOM05D005379 ORTHO05D006661 3.4e-95 352.8 251 66.5
Thecc.03G149400 Theobroma cacao HOM05D005379 ORTHO05D006661 4.4e-95 352.4 255 66.7
AUR62002241 Chenopodium quinoa HOM05D005379 ORTHO05D006661 5.7e-95 352.1 257 65.8
CANSAT56G0595 Cannabis sativa HOM05D005379 ORTHO05D006661 9.8e-95 351.3 260 66.5
MD07G1249400 Malus domestica HOM05D005379 ORTHO05D006661 1.7e-94 350.5 280 62.9
AUR62015453 Chenopodium quinoa HOM05D005379 ORTHO05D006661 4.9e-94 349.0 258 65.5
PGR004G0100 Punica granatum HOM05D005379 ORTHO05D006661 6.3e-94 348.6 281 64.1
Gohir.A07G043200 Gossypium hirsutum HOM05D005379 ORTHO05D006661 5.4e-93 345.5 280 61.4
Hund11852 Selenicereus undatus HOM05D005379 ORTHO05D006661 7.0e-93 345.1 258 67.1
EL10Ac3g05878 Beta vulgaris HOM05D005379 ORTHO05D006661 2.7e-92 343.2 283 61.8
Ciclev10005581m.g Citrus clementina HOM05D005379 ORTHO05D006661 3.5e-92 342.8 255 66.3
ATR0057G081 Amborella trichopoda HOM05D005379 ORTHO05D006661 5.9e-92 342.0 248 66.9
Gorai.001G050800 Gossypium raimondii HOM05D005379 ORTHO05D006661 5.9e-92 342.0 255 64.7
FAN10G0849 Fragaria x ananassa HOM05D005379 ORTHO05D006661 1.3e-91 340.9 250 64.4
Potri.003G151600 Populus trichocarpa HOM05D005379 ORTHO05D006661 6.6e-91 338.6 251 66.9
FAN03G3283 Fragaria x ananassa HOM05D005379 ORTHO05D006661 8.6e-91 338.2 275 59.3
FvH4_7g27000 Fragaria vesca HOM05D005379 ORTHO05D006661 1.9e-90 337.0 255 63.5
PSO782G5074 Papaver somniferum HOM05D005379 ORTHO05D006661 3.3e-90 336.3 250 66.8
PSO063G0621 Papaver somniferum HOM05D005379 ORTHO05D006661 7.3e-90 335.1 256 64.8
Sabra03G0109800 Salix brachista HOM05D005379 ORTHO05D006661 7.3e-90 335.1 221 74.2
Sed0000219 Sechium edule HOM05D005379 ORTHO05D006661 9.5e-90 334.7 253 66.0
CsaV3_6G041840 Cucumis sativus L. HOM05D005379 ORTHO05D006661 1.2e-89 334.3 251 66.1
MELO3C008037.2 Cucumis melo HOM05D005379 ORTHO05D006661 2.8e-89 333.2 251 65.7
FAN06G0815 Fragaria x ananassa HOM05D005379 ORTHO05D006661 6.1e-89 332.0 252 63.5
Hund04565 Selenicereus undatus HOM05D005379 ORTHO05D006661 6.1e-89 332.0 258 64.7
Glyma.15G056200 Glycine max HOM05D005379 ORTHO05D006661 1.0e-88 331.3 250 66.0
COL.COLO4_37344 Corchorus olitorius HOM05D003586 ORTHO05D004036 1.4e-88 330.9 229 69.0
HPP92_009947 Vanilla planifolia HOM05D005379 ORTHO05D006227 5.2e-88 328.9 303 55.8
MSTRG.8845 Avicennia marina HOM05D005379 ORTHO05D006661 8.9e-88 328.2 308 55.2
CiPaw.08G041400 Carya illinoinensis HOM05D005379 ORTHO05D006661 8.9e-88 328.2 185 82.7
Phvul.006G202400 Phaseolus vulgaris HOM05D005379 ORTHO05D006661 8.9e-88 328.2 250 64.4
Glyma.08G176800 Glycine max HOM05D005379 ORTHO05D006661 1.2e-87 327.8 250 64.4
CDE11G0172 Ceratophyllum demersum HOM05D005379 ORTHO05D006661 4.4e-87 325.9 285 57.5
Ah.13g071160 Amaranthus hybridus HOM05D005379 ORTHO05D006661 5.8e-87 325.5 271 61.3
Peaxi162Scf00304g01113 Petunia axillaris HOM05D005379 ORTHO05D006661 5.8e-87 325.5 229 69.0
Lsat_1_v5_gn_8_9541 Lactuca sativa HOM05D005379 ORTHO05D006661 7.5e-87 325.1 280 57.9
ClCG01G015600 Citrullus lanatus HOM05D005379 ORTHO05D006661 1.3e-86 324.3 256 62.1
VMungo0540G0153 Vigna mungo HOM05D005379 ORTHO05D006661 8.3e-86 321.6 250 63.2
Migut.F00521 Erythranthe guttata HOM05D005379 ORTHO05D006661 1.9e-85 320.5 257 61.5
Psat1g214640 Pisum sativum HOM05D005379 ORTHO05D006661 1.9e-85 320.5 250 63.6
Lj3g0027387 Lotus japonicus HOM05D005379 ORTHO05D006661 3.2e-85 319.7 250 63.2
Medtr2g009320 Medicago truncatula HOM05D005379 ORTHO05D006661 3.2e-85 319.7 250 63.2
THA.LOC104811535 Tarenaya hassleriana HOM05D005379 ORTHO05D006661 6.0e-84 315.5 255 60.8
Haze_22191 Corylus avellana HOM05D005379 ORTHO05D006661 1.0e-83 314.7 251 65.7
Cc02_g04670 Coffea canephora HOM05D005379 ORTHO05D006661 1.1e-82 311.2 255 62.4
Aa31LG3G7760 Aethionema arabicum HOM05D005379 ORTHO05D006661 1.5e-82 310.8 230 64.3
Ca_00152_v3 Cicer arietinum L. HOM05D005379 ORTHO05D006661 4.3e-82 309.3 250 63.2
Sp6g13420 Schrenkiella parvula HOM05D005379 ORTHO05D006661 5.6e-82 308.9 261 59.0
BcaB08g35480 Brassica carinata HOM05D005379 ORTHO05D006661 7.3e-82 308.5 255 59.6
Actinidia31671 Actinidia chinensis HOM05D005379 ORTHO05D006661 1.2e-81 307.8 283 59.7
CARHR256800 Cardamine hirsuta HOM05D005379 ORTHO05D006661 1.6e-81 307.4 222 65.8
AT5G51220 Arabidopsis thaliana HOM05D005379 ORTHO05D006661 2.8e-81 306.6 261 58.6
arahy.Tifrunner.gnm1.ann1.3L844V Arachis hypogaea HOM05D005379 ORTHO05D006661 2.8e-81 306.6 228 68.4
Thhalv10014342m.g Eutrema salsugineum HOM05D005379 ORTHO05D006661 6.2e-81 305.4 261 60.2
ECA233G0107 Erigeron canadensis HOM05D003586 ORTHO05D004036 8.0e-81 305.1 289 54.7
SalBow7G3941 Salvia bowleyana HOM05D005379 ORTHO05D006661 8.0e-81 305.1 289 54.0
SalBow5G2200 Salvia bowleyana HOM05D005379 ORTHO05D006661 1.8e-80 303.9 263 58.6
arahy.Tifrunner.gnm1.ann1.8RST7H Arachis hypogaea HOM05D005379 ORTHO05D006661 2.3e-80 303.5 223 69.5
A10p07900 Brassica napus HOM05D005379 ORTHO05D006661 2.3e-80 303.5 251 61.0
BraSC35t46008Z Brassica rapa HOM05D005379 ORTHO05D006661 2.3e-80 303.5 251 61.0
BcaC04g20721 Brassica carinata HOM05D005379 ORTHO05D006661 3.1e-80 303.1 256 59.0
C09p39890 Brassica napus HOM05D005379 ORTHO05D006661 4.0e-80 302.8 251 60.2
BolC9t56888H Brassica oleracea HOM05D005379 ORTHO05D006661 4.0e-80 302.8 251 60.2
Carub.0008s1126 Capsella rubella HOM05D005379 ORTHO05D006661 6.8e-80 302.0 195 70.8
SalBow7G1847 Salvia bowleyana HOM05D005379 ORTHO05D006661 1.2e-79 301.2 289 53.6
Cpa.g.sc13.263 Carica papaya HOM05D005379 ORTHO05D006661 2.6e-79 300.1 220 67.7
Os07g0490300 Oryza sativa ssp. japonica HOM05D005379 ORTHO05D006661 9.8e-79 298.1 192 72.4
AL8G25500 Arabidopsis lyrata HOM05D005379 ORTHO05D006661 2.9e-78 296.6 190 72.1
Oeu042535.3 Olea europaea HOM05D005379 ORTHO05D006661 2.9e-78 296.6 190 70.5
DCAR_018078 Daucus carota HOM05D005379 ORTHO05D006661 7.0e-77 292.0 258 57.4
Peaxi162Scf00167g00730 Petunia axillaris HOM05D005379 ORTHO05D006661 2.7e-76 290.0 169 78.7
HanXRQChr08g0222701 Helianthus annuus HOM05D005379 ORTHO05D006661 1.0e-75 288.1 219 61.6
Zm00001eb321690 Zea mays HOM05D005379 ORTHO05D006661 3.9e-75 286.2 221 62.9
HanXRQChr05g0139501 Helianthus annuus HOM05D005379 ORTHO05D006661 1.1e-74 284.6 220 61.4
ECA238G1883 Erigeron canadensis HOM05D005379 ORTHO05D006661 1.6e-73 280.8 224 60.3
HanXRQChr07g0205531 Helianthus annuus HOM05D005379 ORTHO05D006661 4.0e-72 276.2 228 60.1
SGA_v2.0_scaffold60G20811 Striga asiatica HOM05D005379 ORTHO05D006661 4.0e-72 276.2 256 56.2
Zm00001eb105230 Zea mays HOM05D005379 ORTHO05D006661 2.2e-70 270.4 174 72.4
Gohir.D07G047600 Gossypium hirsutum HOM05D005379 ORTHO05D006661 3.0e-67 260.0 157 77.1
Oeu022464.1 Olea europaea HOM05D005379 ORTHO05D006661 5.2e-64 249.2 156 73.1
Manes.06G131601 Manihot esculenta HOM05D005379 ORTHO05D006661 1.9e-61 240.7 217 59.0
TPR.G9516 Trifolium pratense HOM05D005379 ORTHO05D006661 9.3e-53 211.8 250 48.4
BcaB05g24017 Brassica carinata HOM05D005379 ORTHO05D006661 3.9e-51 206.5 210 54.3
unitig_0.g2509 Utricularia gibba HOM05D005379 ORTHO05D006661 8.7e-51 205.3 160 63.1
FAN06G1013 Fragaria x ananassa HOM05D005379 ORTHO05D006661 3.3e-50 203.4 121 76.0
AagrBONN_evm.TU.Sc2ySwM_228.472 Anthoceros agrestis HOM05D005379 ORTHO05D006661 2.6e-47 193.7 235 43.4
Pp3c8_7310 Physcomitrium patens HOM05D005379 ORTHO05D006661 7.6e-47 192.2 180 50.6
Mapoly0029s0089 Marchantia polymorpha HOM05D005379 ORTHO05D006661 1.1e-45 188.3 186 47.8
Lalb_Chr16g0382791 Lupinus albus HOM05D005379 ORTHO05D006661 2.4e-45 187.2 152 61.8
CANSAT56G1775 Cannabis sativa HOM05D005379 ORTHO05D006661 1.2e-44 184.9 116 72.4
Dinv06594 Davidia involucrata HOM05D005379 ORTHO05D006661 1.0e-43 181.8 149 65.1
CBR_g48514 Chara braunii HOM05D005379 ORTHO05D006661 1.1e-42 178.3 211 41.7
CANSAT56G1106 Cannabis sativa HOM05D005379 ORTHO05D006661 1.9e-42 177.6 107 76.6
SMO361G0220 Selaginella moellendorffii HOM05D005379 ORTHO05D006661 1.6e-41 174.5 171 49.1
A02p12440 Brassica napus HOM05D005379 ORTHO05D006661 8.2e-25 119.0 80 68.8
BraA02t06308Z Brassica rapa HOM05D005379 ORTHO05D006661 4.1e-24 116.7 80 68.8
BcaC03g14620 Brassica carinata HOM05D005379 ORTHO05D006661 1.0e-22 112.1 82 61.0
MCO01G548 Micromonas commoda HOM05D005379 ORTHO05D006661 4.6e-20 103.2 155 32.9
Ah.13g066300 Amaranthus hybridus HOM05D005379 ORTHO05D006661 3.9e-19 100.1 119 47.9
BolC2t08192H Brassica oleracea HOM05D005379 ORTHO05D006661 2.0e-18 97.8 70 64.3
Cre01.g052050 Chlamydomonas reinhardtii HOM05D005379 ORTHO05D006661 3.4e-15 87.0 141 34.8
Lalb_Chr16g0382801 Lupinus albus HOM05D005379 ORTHO05D006661 5.9e-15 86.3 54 68.5
CSS0008660 Camellia sinensis var. sinensis HOM05D005379 ORTHO05D006661 3.6e-12 77.0 146 36.3
Ah.13g066320 Amaranthus hybridus HOM05D005379 ORTHO05D006661 3.0e-11 73.9 104 44.2
HPP92_009967 Vanilla planifolia HOM05D005379 ORTHO05D006661 3.9e-11 73.6 81 45.7
SEGI_00850 Sequoiadendron giganteum HOM05D005379 ORTHO05D006661 5.1e-11 73.2 47 70.2
Lj1A976T72 Lonicera japonica HOM05D005379 ORTHO05D006661 5.7e-10 69.7 81 50.6
HPP92_009968 Vanilla planifolia HOM05D005379 ORTHO05D006661 1.1e-08 65.5 37 73.0
PRCOL_00000045 Prasinoderma coloniale HOM05D005379 ORTHO05D006661 1.5e-07 61.6 106 31.1
C02p20560 Brassica napus HOM05D005379 ORTHO05D006661 2.9e-06 57.4 52 48.1


User provided reference genes

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