Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06738 Vaccinium macrocarpon HOM05D003765 ORTHO05D004561 0.0e+00 1328.5 704 100.0
Rhsim03G0174800 Rhododendron simsii HOM05D003765 ORTHO05D004561 5.8e-191 671.8 667 63.1
Actinidia13542 Actinidia chinensis HOM05D003765 ORTHO05D004561 2.3e-131 473.8 695 50.4
Peaxi162Scf00192g00516 Petunia axillaris HOM05D003765 ORTHO05D004561 1.1e-109 401.7 729 44.3
Manes.06G141500 Manihot esculenta HOM05D003765 ORTHO05D004561 2.3e-107 394.0 738 42.3
Thecc.03G167000 Theobroma cacao HOM05D003765 ORTHO05D004561 3.1e-107 393.7 723 44.0
Potri.015G135200 Populus trichocarpa HOM05D003765 ORTHO05D004561 1.6e-100 371.3 730 42.9
Gorai.008G281700 Gossypium raimondii HOM05D003765 ORTHO05D004561 1.8e-99 367.9 718 42.3
Lj1A988T34 Lonicera japonica HOM05D003765 ORTHO05D004561 5.8e-98 362.8 738 42.0
Sabra15G0147100 Salix brachista HOM05D003765 ORTHO05D004561 4.9e-97 359.8 730 42.3
RcHm_v2.0_Chr1g0376241 Rosa chinensis HOM05D003765 ORTHO05D004561 2.3e-94 350.9 705 40.6
Potri.012G132900 Populus trichocarpa HOM05D003765 ORTHO05D004561 6.6e-94 349.4 724 41.2
Ciclev10004387m.g Citrus clementina HOM05D003765 ORTHO05D004561 2.5e-93 347.4 744 38.8
FAN06G4109 Fragaria x ananassa HOM05D003765 ORTHO05D004561 3.3e-93 347.1 692 40.3
FAN10G2022 Fragaria x ananassa HOM05D003765 ORTHO05D004561 3.3e-93 347.1 695 40.1
MD01G1193200 Malus domestica HOM05D003765 ORTHO05D004561 3.3e-93 347.1 731 41.7
FvH4_7g28730 Fragaria vesca HOM05D003765 ORTHO05D004561 4.3e-93 346.7 692 40.5
FAN03G1770 Fragaria x ananassa HOM05D003765 ORTHO05D004561 4.3e-93 346.7 702 40.2
FAN06G1616 Fragaria x ananassa HOM05D003765 ORTHO05D004561 7.3e-93 345.9 692 40.2
FAN03G1055 Fragaria x ananassa HOM05D003765 ORTHO05D004561 1.6e-92 344.7 702 40.2
Oeu030141.1 Olea europaea HOM05D003765 ORTHO05D004561 2.1e-92 344.4 687 41.3
Atru.chr1.559 Acer truncatum HOM05D003765 ORTHO05D004561 2.8e-92 344.0 757 40.2
Cpa.g.sc4.199 Carica papaya HOM05D003765 ORTHO05D004561 3.6e-92 343.6 765 40.8
Duzib084G1451 Durio zibethinus HOM05D003765 ORTHO05D004561 4.7e-92 343.2 714 38.7
Gohir.A12G262100 Gossypium hirsutum HOM05D003765 ORTHO05D004561 1.3e-89 335.1 719 40.1
MD00G1004300 Malus domestica HOM05D003765 ORTHO05D004561 1.7e-89 334.7 726 41.5
CiPaw.03G100300 Carya illinoinensis HOM05D003765 ORTHO05D004561 1.9e-88 331.3 717 39.2
Manes.14G030900 Manihot esculenta HOM05D003765 ORTHO05D004561 9.3e-88 328.9 730 37.5
Sabra12G0100000 Salix brachista HOM05D003765 ORTHO05D004561 9.3e-88 328.9 728 39.3
Haze_13790 Corylus avellana HOM05D003765 ORTHO05D004561 2.1e-87 327.8 697 39.7
Gohir.D12G262800 Gossypium hirsutum HOM05D003765 ORTHO05D004561 4.6e-87 326.6 622 43.2
FAN01G1737 Fragaria x ananassa HOM05D003765 ORTHO05D004561 3.0e-86 323.9 740 38.6
Prupe.2G287400 Prunus persica HOM05D003765 ORTHO05D004561 3.0e-86 323.9 728 38.7
Duzib205G1056 Durio zibethinus HOM05D003765 ORTHO05D004561 3.9e-86 323.6 650 39.7
Cc02_g03580 Coffea canephora HOM05D003765 ORTHO05D004561 9.0e-83 312.4 737 36.9
MSTRG.8430 Avicennia marina HOM05D003765 ORTHO05D004561 1.2e-82 312.0 702 40.7
CANSAT21G2021 Cannabis sativa HOM05D003765 ORTHO05D004561 1.2e-82 312.0 761 37.2
Peaxi162Scf00557g00216 Petunia axillaris HOM05D003765 ORTHO05D004561 4.4e-82 310.1 717 37.9
Nitab4.5_0000205g0170 Nicotiana tabacum HOM05D003765 ORTHO05D004561 2.2e-81 307.8 722 38.6
Sopen03g002830 Solanum pennellii HOM05D003765 ORTHO05D004561 4.2e-80 303.5 706 39.7
Nitab4.5_0004911g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 4.6e-79 300.1 747 39.4
Nitab4.5_0000599g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 1.7e-78 298.1 741 40.1
Solyc03g006840.4 Solanum lycopersicum HOM05D003765 ORTHO05D004561 6.6e-78 296.2 714 39.2
Oeu030257.1 Olea europaea HOM05D003765 ORTHO05D004561 8.7e-78 295.8 698 37.4
PGSC0003DMG400024251 Solanum tuberosum HOM05D003765 ORTHO05D004561 8.7e-78 295.8 737 38.3
SalBow2G1841 Salvia bowleyana HOM05D003765 ORTHO05D004561 1.5e-77 295.0 690 38.7
Nn1g01288 Nelumbo nucifera HOM05D003765 ORTHO05D004561 1.2e-74 285.4 777 35.4
Phvul.004G123200 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 7.6e-74 282.7 736 38.2
Eucgr.A02847 Eucalyptus grandis HOM05D003765 ORTHO05D004561 9.9e-74 282.3 725 36.8
Lsat_1_v5_gn_2_130181 Lactuca sativa HOM05D003765 ORTHO05D004561 9.9e-74 282.3 735 35.4
TAR629G2057 Trochodendron aralioides HOM05D003765 ORTHO05D004561 2.2e-73 281.2 696 36.4
Gohir.D09G174700 Gossypium hirsutum HOM05D003765 ORTHO05D004561 3.2e-72 277.3 713 36.2
Lalb_Chr03g0034171 Lupinus albus HOM05D003765 ORTHO05D004561 3.2e-72 277.3 728 36.7
MSTRG.114 Avicennia marina HOM05D003765 ORTHO05D004561 5.4e-72 276.6 751 35.6
Gorai.006G196800 Gossypium raimondii HOM05D003765 ORTHO05D004561 1.2e-71 275.4 717 35.6
Glyma.09G148700 Glycine max HOM05D003765 ORTHO05D004561 4.6e-71 273.5 736 36.0
Gohir.A09G179400 Gossypium hirsutum HOM05D003765 ORTHO05D004561 6.0e-71 273.1 702 35.6
GSVIVG01018447001 Vitis vinifera HOM05D003765 ORTHO05D004561 5.1e-70 270.0 720 36.4
DCAR_014604 Daucus carota HOM05D003765 ORTHO05D004561 6.7e-70 269.6 708 36.6
HanXRQChr14g0461811 Helianthus annuus HOM05D003765 ORTHO05D004561 1.5e-69 268.5 717 35.0
PGR042G0955 Punica granatum HOM05D003765 ORTHO05D004561 2.5e-69 267.7 731 36.0
Hma1.2p1_0488F.1_g163950 Hydrangea macrophylla HOM05D003765 ORTHO05D004561 5.6e-69 266.5 684 38.0
Nn6g34319 Nelumbo nucifera HOM05D003765 ORTHO05D004561 9.6e-69 265.8 801 35.1
Lsat_1_v5_gn_9_53700 Lactuca sativa HOM05D003765 ORTHO05D004561 1.6e-68 265.0 707 35.1
THA.LOC104818268 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 1.2e-66 258.8 716 35.3
THA.LOC104824843 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 7.6e-66 256.1 702 35.2
Lj5g0012460 Lotus japonicus HOM05D003765 ORTHO05D004561 1.7e-65 255.0 708 36.3
Migut.F01159 Erythranthe guttata HOM05D003765 ORTHO05D004561 4.9e-65 253.4 727 35.9
ECA238G0747 Erigeron canadensis HOM05D003765 ORTHO05D004561 4.2e-64 250.4 784 34.6
Dinv35140 Davidia involucrata HOM05D003765 ORTHO05D004561 5.5e-64 250.0 475 46.1
Sp2g25350 Schrenkiella parvula HOM05D003765 ORTHO05D004561 5.5e-64 250.0 691 35.3
Glyma.16G200400 Glycine max HOM05D003765 ORTHO05D004561 4.6e-63 246.9 723 35.4
BolC3t18736H Brassica oleracea HOM05D003765 ORTHO05D004561 6.0e-63 246.5 690 34.6
Aqoxy7G00497 Aquilegia oxysepala HOM05D003765 ORTHO05D004561 7.9e-63 246.1 713 33.5
Dinv28506 Davidia involucrata HOM05D003765 ORTHO05D004561 1.3e-62 245.4 433 46.0
EL10Ac3g05741 Beta vulgaris HOM05D003765 ORTHO05D004561 2.5e-61 241.1 721 35.1
Thhalv10003732m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 4.3e-61 240.4 691 34.4
A06p28880 Brassica napus HOM05D003765 ORTHO05D004561 3.7e-60 237.3 692 35.3
Carub.0008s2285 Capsella rubella HOM05D003765 ORTHO05D004561 6.2e-60 236.5 711 34.7
BraA06t25836Z Brassica rapa HOM05D003765 ORTHO05D004561 8.2e-60 236.1 695 35.1
Lj2g0000316 Lotus japonicus HOM05D003765 ORTHO05D004561 6.9e-59 233.0 720 35.8
TPR.G17415 Trifolium pratense HOM05D003765 ORTHO05D004561 1.5e-58 231.9 696 34.3
Aa31LG11G1410 Aethionema arabicum HOM05D003765 ORTHO05D004561 5.8e-58 229.9 693 34.2
MBI04_g06623_MAGBIO Magnolia biondii HOM05D003765 ORTHO05D004561 7.6e-58 229.6 600 33.7
AL8G38980 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 1.4e-56 225.3 707 33.5
Phvul.007G065400 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 1.4e-56 225.3 725 33.4
Glyma.10G240600 Glycine max HOM05D003765 ORTHO05D004561 2.5e-56 224.6 739 33.4
CARHR275960 Cardamine hirsuta HOM05D003765 ORTHO05D004561 3.2e-56 224.2 699 33.2
COL.COLO4_14229 Corchorus olitorius HOM05D003765 ORTHO05D004561 9.3e-56 222.6 727 32.6
Glyma.20G154100 Glycine max HOM05D003765 ORTHO05D004561 1.6e-55 221.9 736 34.5
Medtr1g101910 Medicago truncatula HOM05D003765 ORTHO05D004561 1.6e-55 221.9 698 32.8
PSO782G0143 Papaver somniferum HOM05D003765 ORTHO05D004561 1.6e-55 221.9 724 32.5
PSO478G3102 Papaver somniferum HOM05D003765 ORTHO05D004561 3.5e-55 220.7 712 33.4
THA.LOC104798744 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 8.7e-54 216.1 696 32.8
Sc19g0001750 Simmondsia chinensis HOM05D003765 ORTHO05D004561 1.5e-53 215.3 707 32.4
Lalb_Chr02g0140881 Lupinus albus HOM05D003765 ORTHO05D004561 4.3e-53 213.8 727 33.6
Lalb_Chr21g0304901 Lupinus albus HOM05D003765 ORTHO05D004561 2.2e-52 211.5 722 35.3
C03p64740 Brassica napus HOM05D003765 ORTHO05D004561 6.3e-52 209.9 617 33.2
THA.LOC104811493 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 1.4e-51 208.8 676 34.0
TPR.G21305 Trifolium pratense HOM05D003765 ORTHO05D004561 4.5e-50 203.8 700 31.6
AT5G62170 Arabidopsis thaliana HOM05D003765 ORTHO05D004561 1.1e-48 199.1 637 32.8
SalBow4G0450 Salvia bowleyana HOM05D003765 ORTHO05D004561 2.5e-48 198.0 656 31.1
Ah.07g208800 Amaranthus hybridus HOM05D003765 ORTHO05D004561 5.5e-48 196.8 726 31.0
CDE04G3755 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 7.2e-48 196.4 726 29.6
VMungo0720G0810 Vigna mungo HOM05D003765 ORTHO05D004561 7.2e-48 196.4 716 32.0
ECA232G3914 Erigeron canadensis HOM05D003765 ORTHO05D004561 3.6e-47 194.1 671 31.3
Medtr6g089530 Medicago truncatula HOM05D003765 ORTHO05D004561 1.5e-45 188.7 734 30.0
Psat1g111440 Pisum sativum HOM05D003765 ORTHO05D004561 5.7e-45 186.8 685 32.1
arahy.Tifrunner.gnm1.ann1.S2H83J Arachis hypogaea HOM05D003765 ORTHO05D004561 1.3e-44 185.7 718 30.6
Psat6g201640 Pisum sativum HOM05D003765 ORTHO05D004561 2.2e-44 184.9 656 33.4
arahy.Tifrunner.gnm1.ann1.G7HECD Arachis hypogaea HOM05D003765 ORTHO05D004561 3.4e-42 177.6 694 31.0
DCAR_009410 Daucus carota HOM05D003765 ORTHO05D004561 1.0e-41 176.0 689 31.9
Ca_10812_v3 Cicer arietinum L. HOM05D003765 ORTHO05D004561 2.2e-41 174.9 701 31.8
AUR62016059 Chenopodium quinoa HOM05D003765 ORTHO05D004561 2.5e-40 171.4 665 29.6
CDE07G1851 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 4.2e-40 170.6 731 28.6
Sp6g14100 Schrenkiella parvula HOM05D003765 ORTHO05D004561 6.7e-38 163.3 718 29.2
ClCG05G007700 Citrullus lanatus HOM05D003765 ORTHO05D004561 8.2e-36 156.4 671 31.1
MELO3C006859.2 Cucumis melo HOM05D003765 ORTHO05D004561 1.1e-35 156.0 683 30.9
VMungo0464G1637 Vigna mungo HOM05D003765 ORTHO05D004561 3.1e-35 154.5 249 47.8
CsaV3_3G016640 Cucumis sativus L. HOM05D003765 ORTHO05D004561 2.6e-34 151.4 675 30.2
Thhalv10012958m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 5.0e-33 147.1 688 29.1
SGA_v2.0_scaffold113G31787 Striga asiatica HOM05D003765 ORTHO05D004561 6.5e-33 146.7 684 29.2
AL8G26150 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 1.1e-29 136.0 652 29.1
Dinv40025 Davidia involucrata HOM05D003765 ORTHO05D000169 5.7e-29 133.7 207 48.3
Sed0025435 Sechium edule HOM05D003765 ORTHO05D004561 9.7e-29 132.9 689 28.4
Dinv28507 Davidia involucrata HOM05D003765 ORTHO05D004561 2.4e-27 128.3 159 45.9
unitig_37.g11944 Utricularia gibba HOM05D003765 ORTHO05D004561 1.2e-26 125.9 315 38.7
AUR62021267 Chenopodium quinoa HOM05D003765 ORTHO05D004561 2.6e-26 124.8 481 34.3
Aa31LG3G8290 Aethionema arabicum HOM05D003765 ORTHO05D004561 5.9e-26 123.6 691 27.4
arahy.Tifrunner.gnm1.ann1.3X1084 Arachis hypogaea HOM05D003765 ORTHO05D004561 1.3e-25 122.5 712 28.4
Migut.F00398 Erythranthe guttata HOM05D003765 ORTHO05D004561 1.7e-25 122.1 315 33.7
BcaB08g35538 Brassica carinata HOM05D003765 ORTHO05D004561 2.2e-25 121.7 396 32.1
C09p41340 Brassica napus HOM05D003765 ORTHO05D004561 3.8e-25 120.9 374 31.3
BolC9t57009H Brassica oleracea HOM05D003765 ORTHO05D004561 3.8e-25 120.9 374 31.3
A10p09680 Brassica napus HOM05D003765 ORTHO05D004561 1.1e-24 119.4 418 30.6
CARHR264740 Cardamine hirsuta HOM05D003765 ORTHO05D004561 1.5e-24 119.0 422 31.5
BraA10t43049Z Brassica rapa HOM05D003765 ORTHO05D004561 5.5e-24 117.1 418 30.4
AT5G51850 Arabidopsis thaliana HOM05D003765 ORTHO05D004561 1.4e-22 112.5 429 32.9
HanXRQChr15g0486221 Helianthus annuus HOM05D003765 ORTHO05D004561 6.8e-22 110.2 377 33.2
Aa31LG6G8690 Aethionema arabicum HOM05D003765 ORTHO05D004561 1.5e-21 109.0 284 35.6
BcaB02g09632 Brassica carinata HOM05D003765 ORTHO05D004561 1.5e-21 109.0 544 28.7
Sp7g23450 Schrenkiella parvula HOM05D003765 ORTHO05D004561 2.6e-21 108.2 436 30.3
Thhalv10025080m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 9.8e-21 106.3 449 29.6
unitig_22.g5225 Utricularia gibba HOM05D003765 ORTHO05D004561 9.8e-21 106.3 249 34.1
BcaB03g12466 Brassica carinata HOM05D003765 ORTHO05D004561 1.3e-20 105.9 404 31.7
ATR0661G439 Amborella trichopoda HOM05D003765 ORTHO05D004561 3.7e-20 104.4 783 25.2
Sed0026899 Sechium edule HOM05D003765 ORTHO05D004561 2.7e-18 98.2 601 26.5
BraA08t34069Z Brassica rapa HOM05D003765 ORTHO05D004561 2.2e-17 95.1 411 30.7
A08p21190 Brassica napus HOM05D003765 ORTHO05D004561 2.9e-17 94.7 411 30.7
Carub.0008s1189 Capsella rubella HOM05D003765 ORTHO05D004561 3.8e-17 94.4 540 27.6
BolC8t48608H Brassica oleracea HOM05D003765 ORTHO05D004561 1.6e-15 89.0 401 28.9
CsaV3_5G005590 Cucumis sativus L. HOM05D003765 ORTHO05D004561 2.1e-15 88.6 272 32.7
BcaC07g38188 Brassica carinata HOM05D003765 ORTHO05D004561 3.6e-15 87.8 410 29.3
VMungo0251G2630 Vigna mungo HOM05D003765 ORTHO05D004561 1.4e-14 85.9 109 48.6
ClCG01G005340 Citrullus lanatus HOM05D003765 ORTHO05D004561 2.3e-14 85.1 463 28.3
A09p07540 Brassica napus HOM05D003765 ORTHO05D004561 6.8e-14 83.6 381 30.7
arahy.Tifrunner.gnm1.ann1.XAW92V Arachis hypogaea HOM05D003765 ORTHO05D004561 8.8e-14 83.2 703 26.6
VMungo0464G2043 Vigna mungo HOM05D003765 ORTHO05D004561 2.6e-13 81.6 247 30.0
AT4G25430 Arabidopsis thaliana HOM05D003765 ORTHO05D023707 3.4e-13 81.3 409 29.8
BcaC04g23427 Brassica carinata HOM05D003765 ORTHO05D004561 3.4e-13 81.3 260 34.6
VMungo0100G0003 Vigna mungo HOM05D003765 ORTHO05D004561 3.4e-13 81.3 119 47.9
C09p08430 Brassica napus HOM05D003765 ORTHO05D004561 4.4e-13 80.9 268 34.0
BolC9t53753H Brassica oleracea HOM05D003765 ORTHO05D004561 9.8e-13 79.7 265 34.3
Carub.0007s1558 Capsella rubella HOM05D003765 ORTHO05D004561 2.8e-12 78.2 419 29.6
BraA09t36408Z Brassica rapa HOM05D003765 ORTHO05D004561 2.4e-11 75.1 370 29.5
SEGI_17592 Sequoiadendron giganteum HOM05D003765 ORTHO05D004561 1.2e-10 72.8 145 30.3
BcaNung01408 Brassica carinata HOM05D003765 ORTHO05D004561 3.8e-09 67.8 258 33.3
BcaNung01409 Brassica carinata HOM05D003765 ORTHO05D004561 3.8e-09 67.8 258 33.3
Lalb_Chr19g0131141 Lupinus albus HOM05D003765 ORTHO05D004561 2.5e-08 65.1 114 35.1
Zm00001eb418620 Zea mays HOM05D003765 ORTHO05D004561 2.5e-08 65.1 142 28.9
Os04g0106500 Oryza sativa ssp. japonica HOM05D003765 ORTHO05D004561 3.3e-08 64.7 244 31.1
MELO3C005394.2 Cucumis melo HOM05D003765 ORTHO05D004561 5.6e-08 63.9 193 34.2
AL7G27690 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 1.6e-07 62.4 442 26.9


User provided reference genes

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