Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06737 Vaccinium macrocarpon HOM05D005135 ORTHO05D005810 1.7e-197 692.6 378 100.0
Rhsim03G0174700 Rhododendron simsii HOM05D000559 ORTHO05D000596 2.9e-80 303.1 371 57.7
Actinidia31800 Actinidia chinensis HOM05D005135 ORTHO05D005810 2.7e-78 296.6 381 50.7
Dinv35139 Davidia involucrata HOM05D005135 ORTHO05D005810 1.8e-74 283.9 385 49.9
vmacro09870 Vaccinium macrocarpon HOM05D005135 ORTHO05D005810 2.0e-73 280.4 376 49.2
Hma1.2p1_0488F.1_g163940 Hydrangea macrophylla HOM05D005135 ORTHO05D005810 5.9e-73 278.9 383 48.8
Potri.015G135000 Populus trichocarpa HOM05D005135 ORTHO05D005810 5.2e-69 265.8 383 46.7
Sabra15G0147000 Salix brachista HOM05D005135 ORTHO05D005810 7.5e-68 261.9 383 48.0
Dinv28508 Davidia involucrata HOM05D005135 ORTHO05D005810 9.7e-68 261.5 160 88.1
CSS0048110 Camellia sinensis var. sinensis HOM05D005135 ORTHO05D005810 6.3e-67 258.8 376 47.1
Oeu030256.1 Olea europaea HOM05D005135 ORTHO05D005810 1.4e-66 257.7 367 50.1
Thecc.03G166900 Theobroma cacao HOM05D005135 ORTHO05D005810 1.4e-66 257.7 378 45.5
Manes.14G031000 Manihot esculenta HOM05D005135 ORTHO05D005810 7.0e-66 255.4 373 50.9
CiPaw.03G100200 Carya illinoinensis HOM05D005135 ORTHO05D005810 9.1e-66 255.0 375 47.5
GSVIVG01018448001 Vitis vinifera HOM05D005135 ORTHO05D005810 9.1e-66 255.0 374 46.3
Oeu022533.1 Olea europaea HOM05D005135 ORTHO05D005810 4.5e-65 252.7 371 44.5
TAR629G2517 Trochodendron aralioides HOM05D005135 ORTHO05D005810 1.5e-63 247.7 379 49.9
Gohir.D08G104900 Gossypium hirsutum HOM05D005135 ORTHO05D005810 3.2e-63 246.5 373 45.3
Duzib084G0614 Durio zibethinus HOM05D005135 ORTHO05D005810 7.2e-63 245.4 378 43.9
FAN01G0847 Fragaria x ananassa HOM05D005135 ORTHO05D005810 7.2e-63 245.4 375 44.3
Eucgr.K00188 Eucalyptus grandis HOM05D005135 ORTHO05D005810 9.4e-63 245.0 373 45.0
FAN06G3133 Fragaria x ananassa HOM05D005135 ORTHO05D005810 9.4e-63 245.0 374 47.9
Duzib068G0893 Durio zibethinus HOM05D005135 ORTHO05D005810 1.2e-62 244.6 378 44.4
unitig_52.g17751 Utricularia gibba HOM05D005135 ORTHO05D005810 1.6e-62 244.2 382 44.0
VMungo0720G1039 Vigna mungo HOM05D005135 ORTHO05D005810 1.6e-62 244.2 376 44.9
FAN06G4903 Fragaria x ananassa HOM05D005135 ORTHO05D005810 2.1e-62 243.8 374 47.6
RcHm_v2.0_Chr1g0376221 Rosa chinensis HOM05D005135 ORTHO05D005810 4.7e-62 242.7 374 48.1
FAN03G3482 Fragaria x ananassa HOM05D005135 ORTHO05D005810 3.0e-61 240.0 374 47.3
Lj5g0000742 Lotus japonicus HOM05D005135 ORTHO05D005810 3.0e-61 240.0 156 79.5
TWI23G0093 Tripterygium wilfordii HOM05D005135 ORTHO05D005810 4.0e-61 239.6 377 46.7
Prupe.2G287200 Prunus persica HOM05D005135 ORTHO05D005810 1.5e-60 237.7 372 48.7
Glyma.10G240700 Glycine max HOM05D005135 ORTHO05D005810 2.6e-60 236.9 373 44.5
FvH4_7g28720 Fragaria vesca HOM05D005135 ORTHO05D005810 3.4e-60 236.5 368 47.3
Gorai.008G281800 Gossypium raimondii HOM05D005135 ORTHO05D005810 7.5e-60 235.3 373 45.0
Actinidia14214 Actinidia chinensis HOM05D005135 ORTHO05D005810 9.8e-60 235.0 216 64.8
MSTRG.8780 Avicennia marina HOM05D005135 ORTHO05D005810 9.8e-60 235.0 373 42.9
Gohir.A08G093700 Gossypium hirsutum HOM05D005135 ORTHO05D005810 9.8e-60 235.0 373 43.2
Ciclev10005677m.g Citrus clementina HOM05D005135 ORTHO05D005810 1.3e-59 234.6 376 45.5
MD01G1193100 Malus domestica HOM05D005135 ORTHO05D005810 1.3e-59 234.6 376 47.3
Nitab4.5_0000205g0180 Nicotiana tabacum HOM05D005135 ORTHO05D005810 1.3e-59 234.6 159 79.9
Oeu030142.1 Olea europaea HOM05D005135 ORTHO05D005810 1.3e-59 234.6 373 43.4
Nn1g01287 Nelumbo nucifera HOM05D005135 ORTHO05D005810 1.7e-59 234.2 373 43.7
TWI39G0390 Tripterygium wilfordii HOM05D005135 ORTHO05D005810 2.2e-59 233.8 363 49.0
Migut.F01160 Erythranthe guttata HOM05D005135 ORTHO05D005810 3.7e-59 233.0 368 44.0
Gohir.A12G262200 Gossypium hirsutum HOM05D005135 ORTHO05D005810 3.7e-59 233.0 373 44.5
PGSC0003DMG400027379 Solanum tuberosum HOM05D005135 ORTHO05D005810 3.7e-59 233.0 383 42.8
Rhsim09G0195100 Rhododendron simsii HOM05D000559 ORTHO05D005810 4.8e-59 232.6 350 46.6
Gohir.D12G262900 Gossypium hirsutum HOM05D005135 ORTHO05D005810 8.3e-59 231.9 373 44.5
Nitab4.5_0001573g0020 Nicotiana tabacum HOM05D005135 ORTHO05D005810 8.3e-59 231.9 240 56.2
CAN.G1187.4 Capsicum annuum HOM05D005135 ORTHO05D005810 1.1e-58 231.5 386 43.3
PSO782G0956 Papaver somniferum HOM05D005135 ORTHO05D005810 1.1e-58 231.5 154 77.9
Phvul.007G065300 Phaseolus vulgaris HOM05D005135 ORTHO05D005810 1.4e-58 231.1 376 43.6
CDE07G1455 Ceratophyllum demersum HOM05D005135 ORTHO05D005810 1.8e-58 230.7 148 80.4
Gohir.D04G141600 Gossypium hirsutum HOM05D005135 ORTHO05D005810 1.8e-58 230.7 158 76.6
Aqoxy7G00498 Aquilegia oxysepala HOM05D005135 ORTHO05D005810 2.4e-58 230.3 149 79.9
HanXRQChr14g0461821 Helianthus annuus HOM05D005135 ORTHO05D005810 2.4e-58 230.3 148 81.8
PSO478G0331 Papaver somniferum HOM05D005135 ORTHO05D005810 3.1e-58 229.9 154 77.9
PGR042G3048 Punica granatum HOM05D005135 ORTHO05D005810 4.1e-58 229.6 152 80.9
ATR0661G043 Amborella trichopoda HOM05D005135 ORTHO05D005810 5.4e-58 229.2 373 44.8
Lsat_1_v5_gn_2_130120 Lactuca sativa HOM05D005135 ORTHO05D005810 5.4e-58 229.2 164 75.6
Glyma.20G154000 Glycine max HOM05D005135 ORTHO05D005810 7.0e-58 228.8 373 44.0
CAN.G1182.3 Capsicum annuum HOM05D005135 ORTHO05D005810 9.1e-58 228.4 148 80.4
CARHR264720 Cardamine hirsuta HOM05D005135 ORTHO05D005810 1.2e-57 228.0 153 79.1
Sed0024541 Sechium edule HOM05D005135 ORTHO05D005810 1.2e-57 228.0 375 43.2
Sopen03g002840 Solanum pennellii HOM05D005135 ORTHO05D005810 1.2e-57 228.0 379 43.0
Carub.0008s1186 Capsella rubella HOM05D005135 ORTHO05D005810 1.6e-57 227.6 153 77.8
A03p16010 Brassica napus HOM05D005135 ORTHO05D005810 2.0e-57 227.3 153 79.7
BolC3t14274H Brassica oleracea HOM05D005135 ORTHO05D005810 2.0e-57 227.3 153 79.7
BraA03t10892Z Brassica rapa HOM05D005135 ORTHO05D005810 2.0e-57 227.3 153 79.7
Peaxi162Scf00557g00212 Petunia axillaris HOM05D005135 ORTHO05D005810 3.5e-57 226.5 376 42.6
arahy.Tifrunner.gnm1.ann1.3G6IEL Arachis hypogaea HOM05D005135 ORTHO05D005810 5.9e-57 225.7 152 77.0
arahy.Tifrunner.gnm1.ann1.UR3NDK Arachis hypogaea HOM05D005135 ORTHO05D005810 5.9e-57 225.7 152 77.0
MD00G1004200 Malus domestica HOM05D005135 ORTHO05D005810 5.9e-57 225.7 372 46.8
Thhalv10014510m.g Eutrema salsugineum HOM05D005135 ORTHO05D005810 7.7e-57 225.3 153 78.4
ClCG05G007690 Citrullus lanatus HOM05D005135 ORTHO05D005810 1.0e-56 224.9 374 42.5
ECA238G2105 Erigeron canadensis HOM05D005135 ORTHO05D005810 1.3e-56 224.6 148 79.7
Hund04685 Selenicereus undatus HOM05D005135 ORTHO05D005810 1.3e-56 224.6 180 66.7
BcaB01g04154 Brassica carinata HOM05D005135 ORTHO05D005810 1.7e-56 224.2 153 77.8
Sopen11g029970 Solanum pennellii HOM05D005135 ORTHO05D005810 1.7e-56 224.2 379 42.2
MELO3C006858.2 Cucumis melo HOM05D005135 ORTHO05D005810 2.3e-56 223.8 374 42.8
Sp6g14090 Schrenkiella parvula HOM05D005135 ORTHO05D005810 2.3e-56 223.8 153 76.5
Solyc03g006850.3 Solanum lycopersicum HOM05D005135 ORTHO05D005810 2.3e-56 223.8 379 42.5
Solyc11g072300.2 Solanum lycopersicum HOM05D005135 ORTHO05D005810 2.3e-56 223.8 380 41.6
AL8G26130 Arabidopsis lyrata HOM05D005135 ORTHO05D005810 2.9e-56 223.4 187 65.8
BcaB08g35536 Brassica carinata HOM05D005135 ORTHO05D005810 2.9e-56 223.4 153 77.1
BcaC01g06140 Brassica carinata HOM05D005135 ORTHO05D005810 2.9e-56 223.4 147 81.6
Ca_10813_v3 Cicer arietinum L. HOM05D005135 ORTHO05D005810 3.8e-56 223.0 157 73.2
FAN10G2880 Fragaria x ananassa HOM05D005135 ORTHO05D005810 5.0e-56 222.6 407 39.8
Medtr1g101945 Medicago truncatula HOM05D005135 ORTHO05D005810 6.5e-56 222.2 157 74.5
C03p18840 Brassica napus HOM05D005135 ORTHO05D005810 8.6e-56 221.9 147 81.0
COL.COLO4_14228 Corchorus olitorius HOM05D005135 ORTHO05D005810 8.6e-56 221.9 378 41.8
SGA_v2.0_scaffold303G47872 Striga asiatica HOM05D005135 ORTHO05D005810 8.6e-56 221.9 208 62.5
AT5G51840 Arabidopsis thaliana HOM05D005135 ORTHO05D005810 3.2e-55 219.9 153 75.8
Sc13g0008230 Simmondsia chinensis HOM05D005135 ORTHO05D005810 7.2e-55 218.8 151 76.8
CsaV3_3G016630 Cucumis sativus L. HOM05D005135 ORTHO05D005810 9.5e-55 218.4 374 42.2
SGA_v2.0_scaffold10G05426 Striga asiatica HOM05D005135 ORTHO05D005810 1.2e-54 218.0 373 42.4
HPP92_001726 Vanilla planifolia HOM05D005135 ORTHO05D005810 1.2e-54 218.0 152 75.0
Zm00001eb027200 Zea mays HOM05D005135 ORTHO05D005810 2.1e-54 217.2 155 71.0
Lj1A988G25 Lonicera japonica HOM05D005135 ORTHO05D005810 2.8e-54 216.9 344 45.1
Lalb_Chr06g0160891 Lupinus albus HOM05D005135 ORTHO05D005810 4.7e-54 216.1 369 42.8
HPP92_001719 Vanilla planifolia HOM05D005135 ORTHO05D005810 4.7e-54 216.1 152 74.3
Aa31LG3G8280 Aethionema arabicum HOM05D005135 ORTHO05D005810 6.1e-54 215.7 150 75.3
Psat7g169320 Pisum sativum HOM05D005135 ORTHO05D005810 1.4e-53 214.5 149 77.2
EL10Ac3g05742 Beta vulgaris HOM05D005135 ORTHO05D005810 5.7e-52 209.1 364 40.9
Ah.07g208790 Amaranthus hybridus HOM05D005135 ORTHO05D005810 7.5e-52 208.8 155 69.7
AUR62021268 Chenopodium quinoa HOM05D005135 ORTHO05D005810 9.8e-52 208.4 165 67.3
FAN03G1115 Fragaria x ananassa HOM05D005135 ORTHO05D005810 2.8e-51 206.8 426 40.8
VMungo0464G2082 Vigna mungo HOM05D000559 ORTHO05D005810 3.7e-51 206.5 152 73.0
Sed0023089 Sechium edule HOM05D005135 ORTHO05D005810 3.5e-49 199.9 373 38.6
AUR62016060 Chenopodium quinoa HOM05D005135 ORTHO05D005810 7.8e-49 198.7 181 61.3
Cc02_g03590 Coffea canephora HOM05D005135 ORTHO05D005810 2.1e-46 190.7 368 41.0
TPR.G17397 Trifolium pratense HOM05D005135 ORTHO05D005810 3.0e-45 186.8 131 74.8
PGR142G1544 Punica granatum HOM05D005135 ORTHO05D005810 1.5e-44 184.5 373 38.1
AagrBONN_evm.TU.Sc2ySwM_117.1266 Anthoceros agrestis HOM05D005135 ORTHO05D005810 5.7e-44 182.6 147 63.3
Mapoly0096s0072 Marchantia polymorpha HOM05D005135 ORTHO05D005810 9.8e-44 181.8 148 62.2
DCAR_020208 Daucus carota HOM05D005135 ORTHO05D005810 3.5e-41 173.3 116 80.2
Glyma.16G200500 Glycine max HOM05D005135 ORTHO05D005810 6.2e-38 162.5 154 59.1
Pp3c13_17710 Physcomitrium patens HOM05D005135 ORTHO05D005810 3.1e-37 160.2 137 59.9
CDE04G3520 Ceratophyllum demersum HOM05D005135 ORTHO05D005810 3.7e-35 153.3 125 68.0
Lj8C32T8 Lonicera japonica HOM05D005135 ORTHO05D005810 4.9e-35 152.9 99 79.8
Phvul.004G123300 Phaseolus vulgaris HOM05D005135 ORTHO05D005810 3.5e-33 146.7 110 73.6
SHI13830 Sapria himalayana HOM05D005135 ORTHO05D005810 3.5e-33 146.7 135 60.0
Actinidia03096 Actinidia chinensis HOM05D005135 ORTHO05D005810 7.8e-33 145.6 316 37.0
AL8G30000 Arabidopsis lyrata HOM05D005135 ORTHO05D005810 3.3e-31 140.2 93 79.6
Lalb_Chr21g0304891 Lupinus albus HOM05D005135 ORTHO05D005810 4.7e-30 136.3 129 61.2
Haze_13791 Corylus avellana HOM05D005135 ORTHO05D005810 8.1e-30 135.6 386 38.3
PGSC0003DMG400024247 Solanum tuberosum HOM05D005135 ORTHO05D005810 2.8e-22 110.5 74 77.0
Potri.012G132832 Populus trichocarpa HOM05D005135 ORTHO05D005810 1.5e-20 104.8 303 33.7
BcaC04g20628 Brassica carinata HOM05D005135 ORTHO05D005810 2.6e-20 104.0 127 52.8
Hund01499 Selenicereus undatus HOM05D000873 ORTHO05D005810 3.4e-20 103.6 110 55.5
Cre16.g661800 Chlamydomonas reinhardtii HOM05D005135 ORTHO05D005810 4.4e-20 103.2 123 46.3
Os10g0188400 Oryza sativa ssp. japonica HOM05D005135 ORTHO05D005810 8.4e-19 99.0 65 78.5
Peaxi162Scf00192g00520 Petunia axillaris HOM05D005135 ORTHO05D005810 8.4e-19 99.0 329 30.7
Hma1.2p1_3202F.1_g333920 Hydrangea macrophylla HOM05D005135 ORTHO05D005810 1.3e-16 91.7 55 87.3
Potri.012G132766 Populus trichocarpa HOM05D005135 ORTHO05D005810 8.7e-16 89.0 55 81.8
TAR291G0007 Trochodendron aralioides HOM05D005135 ORTHO05D005810 2.8e-14 84.0 80 56.2
Lj8A32T30 Lonicera japonica HOM05D005135 ORTHO05D005810 1.8e-13 81.3 294 30.6
SHI48584 Sapria himalayana HOM05D005135 ORTHO05D005810 7.6e-12 75.9 61 59.0
SMO201G0013 Selaginella moellendorffii HOM05D005135 ORTHO05D005810 4.9e-11 73.2 63 60.3
PRCOL_00003096 Prasinoderma coloniale HOM05D005135 ORTHO05D005810 3.0e-08 63.9 86 45.3
Duzib205G1338 Durio zibethinus HOM05D005135 ORTHO05D005810 5.1e-08 63.2 106 40.6
CDE04G1613 Ceratophyllum demersum HOM05D005135 ORTHO05D005810 1.5e-07 61.6 39 69.2
Duzib205G1376 Durio zibethinus HOM05D005135 ORTHO05D005810 2.5e-07 60.8 106 39.6
C09p41330 Brassica napus HOM05D005135 ORTHO05D005810 2.1e-06 57.8 76 48.7
BolC9t57008H Brassica oleracea HOM05D005135 ORTHO05D005810 2.1e-06 57.8 76 48.7
Cpa.g.sc4.198 Carica papaya HOM05D005135 ORTHO05D005810 2.1e-06 57.8 92 45.7
SEGI_16349 Sequoiadendron giganteum HOM05D056048 ORTHO05D005810 2.1e-06 57.8 65 47.7


User provided reference genes

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